Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1525 and Echvi_1526 overlap by 41 nucleotides Echvi_1526 and Echvi_1527 are separated by 126 nucleotides
Echvi_1525: Echvi_1525 - hypothetical protein, at 1,750,206 to 1,751,612
_1525
Echvi_1526: Echvi_1526 - Glycogen synthase, at 1,751,572 to 1,752,387
_1526
Echvi_1527: Echvi_1527 - pantoate--beta-alanine ligase, at 1,752,514 to 1,753,371
_1527
Position (kb)
1751
1752
1753 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1750.575 kb on - strand, within Echvi_1525 at 1750.609 kb on - strand, within Echvi_1525 at 1750.726 kb on - strand, within Echvi_1525 at 1750.749 kb on - strand, within Echvi_1525 at 1750.749 kb on - strand, within Echvi_1525 at 1750.775 kb on - strand, within Echvi_1525 at 1750.839 kb on - strand, within Echvi_1525 at 1750.862 kb on - strand, within Echvi_1525 at 1750.862 kb on - strand, within Echvi_1525 at 1750.869 kb on - strand, within Echvi_1525 at 1750.869 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.887 kb on - strand, within Echvi_1525 at 1750.941 kb on - strand, within Echvi_1525 at 1750.948 kb on - strand, within Echvi_1525 at 1751.121 kb on - strand, within Echvi_1525 at 1751.174 kb on - strand, within Echvi_1525 at 1751.174 kb on - strand, within Echvi_1525 at 1751.208 kb on - strand, within Echvi_1525 at 1751.337 kb on - strand, within Echvi_1525 at 1751.342 kb on - strand, within Echvi_1525 at 1751.398 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.418 kb on - strand, within Echvi_1525 at 1751.547 kb on - strand at 1751.547 kb on - strand at 1751.551 kb on - strand at 1751.557 kb on - strand at 1751.574 kb on - strand at 1752.431 kb on - strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.501 kb on + strand at 1752.510 kb on + strand at 1752.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,750,575 - Echvi_1525 0.26 -1.7 1,750,609 - Echvi_1525 0.29 +0.5 1,750,726 - Echvi_1525 0.37 +0.7 1,750,749 - Echvi_1525 0.39 -2.9 1,750,749 - Echvi_1525 0.39 -1.6 1,750,775 - Echvi_1525 0.40 -1.0 1,750,839 - Echvi_1525 0.45 -1.1 1,750,862 - Echvi_1525 0.47 -1.9 1,750,862 - Echvi_1525 0.47 +0.9 1,750,869 - Echvi_1525 0.47 -1.6 1,750,869 - Echvi_1525 0.47 -0.1 1,750,887 - Echvi_1525 0.48 +0.2 1,750,887 - Echvi_1525 0.48 +0.9 1,750,887 - Echvi_1525 0.48 -2.7 1,750,941 - Echvi_1525 0.52 -1.3 1,750,948 - Echvi_1525 0.53 -0.8 1,751,121 - Echvi_1525 0.65 -1.0 1,751,174 - Echvi_1525 0.69 +0.6 1,751,174 - Echvi_1525 0.69 -1.9 1,751,208 - Echvi_1525 0.71 -0.8 1,751,337 - Echvi_1525 0.80 -0.7 1,751,342 - Echvi_1525 0.81 -0.5 1,751,398 - Echvi_1525 0.85 +0.3 1,751,418 - Echvi_1525 0.86 -2.3 1,751,418 - Echvi_1525 0.86 +1.1 1,751,418 - Echvi_1525 0.86 -0.9 1,751,418 - Echvi_1525 0.86 -0.3 1,751,547 - +0.6 1,751,547 - -0.9 1,751,551 - -1.6 1,751,557 - +1.3 1,751,574 - -2.8 1,752,431 - +1.5 1,752,501 + -1.0 1,752,501 + +0.5 1,752,501 + +0.4 1,752,501 + -0.6 1,752,510 + +1.1 1,752,510 + -0.5
Or see this region's nucleotide sequence