Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1480 and Echvi_1481 are separated by 33 nucleotides Echvi_1481 and Echvi_1482 are separated by 85 nucleotides Echvi_1482 and Echvi_1483 are separated by 20 nucleotides
Echvi_1480: Echvi_1480 - (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming), at 1,695,272 to 1,696,117
_1480
Echvi_1481: Echvi_1481 - Fatty acid desaturase, at 1,696,151 to 1,696,843
_1481
Echvi_1482: Echvi_1482 - Outer membrane protein/protective antigen OMA87, at 1,696,929 to 1,698,098
_1482
Echvi_1483: Echvi_1483 - hypothetical protein, at 1,698,119 to 1,699,360
_1483
Position (kb)
1696
1697
1698
1699 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1696.040 kb on - strand at 1696.040 kb on - strand at 1696.092 kb on + strand at 1696.128 kb on - strand at 1696.172 kb on + strand at 1696.172 kb on + strand at 1696.173 kb on - strand at 1696.302 kb on + strand, within Echvi_1481 at 1696.302 kb on + strand, within Echvi_1481 at 1696.316 kb on + strand, within Echvi_1481 at 1696.317 kb on - strand, within Echvi_1481 at 1696.423 kb on + strand, within Echvi_1481 at 1696.430 kb on + strand, within Echvi_1481 at 1696.526 kb on + strand, within Echvi_1481 at 1696.526 kb on + strand, within Echvi_1481 at 1696.537 kb on + strand, within Echvi_1481 at 1696.547 kb on + strand, within Echvi_1481 at 1696.548 kb on - strand, within Echvi_1481 at 1696.582 kb on + strand, within Echvi_1481 at 1696.582 kb on + strand, within Echvi_1481 at 1696.582 kb on + strand, within Echvi_1481 at 1696.586 kb on + strand, within Echvi_1481 at 1696.586 kb on + strand, within Echvi_1481 at 1696.587 kb on - strand, within Echvi_1481 at 1696.609 kb on - strand, within Echvi_1481 at 1696.685 kb on + strand, within Echvi_1481 at 1696.686 kb on - strand, within Echvi_1481 at 1696.712 kb on - strand, within Echvi_1481 at 1696.715 kb on - strand, within Echvi_1481 at 1696.715 kb on - strand, within Echvi_1481 at 1696.720 kb on + strand, within Echvi_1481 at 1696.720 kb on + strand, within Echvi_1481 at 1696.720 kb on + strand, within Echvi_1481 at 1696.720 kb on + strand, within Echvi_1481 at 1696.721 kb on - strand, within Echvi_1481 at 1696.721 kb on - strand, within Echvi_1481 at 1696.873 kb on - strand at 1696.936 kb on + strand at 1697.120 kb on + strand, within Echvi_1482 at 1697.136 kb on + strand, within Echvi_1482 at 1697.136 kb on + strand, within Echvi_1482 at 1697.137 kb on - strand, within Echvi_1482 at 1697.137 kb on - strand, within Echvi_1482 at 1697.243 kb on + strand, within Echvi_1482 at 1697.244 kb on - strand, within Echvi_1482 at 1697.244 kb on - strand, within Echvi_1482 at 1697.244 kb on - strand, within Echvi_1482 at 1697.249 kb on + strand, within Echvi_1482 at 1697.250 kb on - strand, within Echvi_1482 at 1697.329 kb on + strand, within Echvi_1482 at 1697.365 kb on + strand, within Echvi_1482 at 1697.366 kb on - strand, within Echvi_1482 at 1697.376 kb on - strand, within Echvi_1482 at 1697.376 kb on - strand, within Echvi_1482 at 1697.400 kb on + strand, within Echvi_1482 at 1697.400 kb on + strand, within Echvi_1482 at 1697.401 kb on - strand, within Echvi_1482 at 1697.401 kb on - strand, within Echvi_1482 at 1697.433 kb on + strand, within Echvi_1482 at 1697.433 kb on + strand, within Echvi_1482 at 1697.433 kb on + strand, within Echvi_1482 at 1697.433 kb on + strand, within Echvi_1482 at 1697.434 kb on - strand, within Echvi_1482 at 1697.434 kb on - strand, within Echvi_1482 at 1697.458 kb on + strand, within Echvi_1482 at 1697.458 kb on + strand, within Echvi_1482 at 1697.459 kb on - strand, within Echvi_1482 at 1697.499 kb on + strand, within Echvi_1482 at 1697.501 kb on + strand, within Echvi_1482 at 1697.502 kb on - strand, within Echvi_1482 at 1697.589 kb on + strand, within Echvi_1482 at 1697.590 kb on - strand, within Echvi_1482 at 1697.590 kb on - strand, within Echvi_1482 at 1697.590 kb on - strand, within Echvi_1482 at 1697.608 kb on + strand, within Echvi_1482 at 1697.609 kb on - strand, within Echvi_1482 at 1697.679 kb on + strand, within Echvi_1482 at 1697.679 kb on + strand, within Echvi_1482 at 1697.679 kb on + strand, within Echvi_1482 at 1697.680 kb on - strand, within Echvi_1482 at 1697.716 kb on - strand, within Echvi_1482 at 1697.716 kb on - strand, within Echvi_1482 at 1697.716 kb on - strand, within Echvi_1482 at 1697.736 kb on - strand, within Echvi_1482 at 1697.861 kb on - strand, within Echvi_1482 at 1697.894 kb on + strand, within Echvi_1482 at 1697.894 kb on + strand, within Echvi_1482 at 1697.963 kb on + strand, within Echvi_1482 at 1697.963 kb on + strand, within Echvi_1482 at 1697.964 kb on - strand, within Echvi_1482 at 1697.964 kb on - strand, within Echvi_1482 at 1697.964 kb on - strand, within Echvi_1482 at 1698.072 kb on + strand at 1698.117 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.132 kb on + strand at 1698.133 kb on - strand at 1698.133 kb on - strand at 1698.133 kb on - strand at 1698.133 kb on - strand at 1698.134 kb on + strand at 1698.134 kb on + strand at 1698.208 kb on - strand at 1698.243 kb on - strand at 1698.243 kb on - strand at 1698.243 kb on - strand at 1698.262 kb on + strand, within Echvi_1483 at 1698.272 kb on + strand, within Echvi_1483 at 1698.273 kb on - strand, within Echvi_1483 at 1698.307 kb on + strand, within Echvi_1483 at 1698.314 kb on - strand, within Echvi_1483 at 1698.316 kb on - strand, within Echvi_1483 at 1698.362 kb on + strand, within Echvi_1483 at 1698.362 kb on + strand, within Echvi_1483 at 1698.366 kb on - strand, within Echvi_1483 at 1698.383 kb on + strand, within Echvi_1483 at 1698.383 kb on + strand, within Echvi_1483 at 1698.383 kb on + strand, within Echvi_1483 at 1698.384 kb on - strand, within Echvi_1483 at 1698.384 kb on - strand, within Echvi_1483 at 1698.386 kb on + strand, within Echvi_1483 at 1698.386 kb on + strand, within Echvi_1483 at 1698.392 kb on + strand, within Echvi_1483 at 1698.392 kb on + strand, within Echvi_1483 at 1698.393 kb on - strand, within Echvi_1483 at 1698.393 kb on - strand, within Echvi_1483 at 1698.398 kb on + strand, within Echvi_1483 at 1698.413 kb on + strand, within Echvi_1483 at 1698.414 kb on - strand, within Echvi_1483 at 1698.425 kb on + strand, within Echvi_1483 at 1698.425 kb on + strand, within Echvi_1483 at 1698.475 kb on + strand, within Echvi_1483 at 1698.541 kb on + strand, within Echvi_1483 at 1698.541 kb on + strand, within Echvi_1483 at 1698.541 kb on + strand, within Echvi_1483 at 1698.648 kb on - strand, within Echvi_1483 at 1698.653 kb on + strand, within Echvi_1483 at 1698.654 kb on - strand, within Echvi_1483 at 1698.659 kb on + strand, within Echvi_1483 at 1698.674 kb on - strand, within Echvi_1483 at 1698.708 kb on + strand, within Echvi_1483 at 1698.727 kb on + strand, within Echvi_1483 at 1698.727 kb on + strand, within Echvi_1483 at 1698.728 kb on - strand, within Echvi_1483 at 1698.728 kb on - strand, within Echvi_1483 at 1698.737 kb on + strand, within Echvi_1483 at 1698.738 kb on - strand, within Echvi_1483 at 1698.744 kb on - strand, within Echvi_1483 at 1698.762 kb on - strand, within Echvi_1483 at 1698.785 kb on + strand, within Echvi_1483 at 1698.785 kb on + strand, within Echvi_1483 at 1698.836 kb on + strand, within Echvi_1483 at 1698.837 kb on - strand, within Echvi_1483 at 1698.837 kb on - strand, within Echvi_1483 at 1698.837 kb on - strand, within Echvi_1483 at 1698.878 kb on + strand, within Echvi_1483 at 1698.879 kb on - strand, within Echvi_1483 at 1698.892 kb on - strand, within Echvi_1483 at 1698.914 kb on + strand, within Echvi_1483 at 1698.915 kb on - strand, within Echvi_1483 at 1699.002 kb on - strand, within Echvi_1483 at 1699.037 kb on - strand, within Echvi_1483 at 1699.086 kb on + strand, within Echvi_1483 at 1699.086 kb on + strand, within Echvi_1483 at 1699.087 kb on - strand, within Echvi_1483 at 1699.094 kb on - strand, within Echvi_1483 at 1699.094 kb on - strand, within Echvi_1483 at 1699.097 kb on + strand, within Echvi_1483
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,696,040 - +0.4 1,696,040 - -0.5 1,696,092 + +1.3 1,696,128 - +0.6 1,696,172 + -0.5 1,696,172 + -2.0 1,696,173 - -0.9 1,696,302 + Echvi_1481 0.22 -0.4 1,696,302 + Echvi_1481 0.22 -0.4 1,696,316 + Echvi_1481 0.24 -1.6 1,696,317 - Echvi_1481 0.24 +0.1 1,696,423 + Echvi_1481 0.39 -2.0 1,696,430 + Echvi_1481 0.40 -1.4 1,696,526 + Echvi_1481 0.54 -0.3 1,696,526 + Echvi_1481 0.54 -1.6 1,696,537 + Echvi_1481 0.56 -1.2 1,696,547 + Echvi_1481 0.57 -1.4 1,696,548 - Echvi_1481 0.57 +0.7 1,696,582 + Echvi_1481 0.62 -0.7 1,696,582 + Echvi_1481 0.62 +1.6 1,696,582 + Echvi_1481 0.62 -0.9 1,696,586 + Echvi_1481 0.63 -0.3 1,696,586 + Echvi_1481 0.63 -0.3 1,696,587 - Echvi_1481 0.63 -2.8 1,696,609 - Echvi_1481 0.66 -1.7 1,696,685 + Echvi_1481 0.77 -2.6 1,696,686 - Echvi_1481 0.77 +1.0 1,696,712 - Echvi_1481 0.81 +0.3 1,696,715 - Echvi_1481 0.81 +1.9 1,696,715 - Echvi_1481 0.81 -0.6 1,696,720 + Echvi_1481 0.82 +0.6 1,696,720 + Echvi_1481 0.82 +0.3 1,696,720 + Echvi_1481 0.82 +1.7 1,696,720 + Echvi_1481 0.82 -2.4 1,696,721 - Echvi_1481 0.82 -0.3 1,696,721 - Echvi_1481 0.82 -0.2 1,696,873 - +0.2 1,696,936 + +0.6 1,697,120 + Echvi_1482 0.16 -1.8 1,697,136 + Echvi_1482 0.18 -0.3 1,697,136 + Echvi_1482 0.18 -0.4 1,697,137 - Echvi_1482 0.18 -0.4 1,697,137 - Echvi_1482 0.18 -0.8 1,697,243 + Echvi_1482 0.27 +0.2 1,697,244 - Echvi_1482 0.27 +1.2 1,697,244 - Echvi_1482 0.27 +0.2 1,697,244 - Echvi_1482 0.27 -0.0 1,697,249 + Echvi_1482 0.27 -2.0 1,697,250 - Echvi_1482 0.27 -0.3 1,697,329 + Echvi_1482 0.34 -1.0 1,697,365 + Echvi_1482 0.37 -1.8 1,697,366 - Echvi_1482 0.37 -2.1 1,697,376 - Echvi_1482 0.38 -1.5 1,697,376 - Echvi_1482 0.38 +1.0 1,697,400 + Echvi_1482 0.40 -1.0 1,697,400 + Echvi_1482 0.40 -2.3 1,697,401 - Echvi_1482 0.40 +2.0 1,697,401 - Echvi_1482 0.40 -1.1 1,697,433 + Echvi_1482 0.43 +1.6 1,697,433 + Echvi_1482 0.43 -0.0 1,697,433 + Echvi_1482 0.43 -1.6 1,697,433 + Echvi_1482 0.43 +0.6 1,697,434 - Echvi_1482 0.43 -0.1 1,697,434 - Echvi_1482 0.43 -1.6 1,697,458 + Echvi_1482 0.45 -1.9 1,697,458 + Echvi_1482 0.45 -1.2 1,697,459 - Echvi_1482 0.45 -0.3 1,697,499 + Echvi_1482 0.49 -0.8 1,697,501 + Echvi_1482 0.49 -0.5 1,697,502 - Echvi_1482 0.49 -0.1 1,697,589 + Echvi_1482 0.56 -0.1 1,697,590 - Echvi_1482 0.56 +1.6 1,697,590 - Echvi_1482 0.56 -0.7 1,697,590 - Echvi_1482 0.56 -1.8 1,697,608 + Echvi_1482 0.58 -2.8 1,697,609 - Echvi_1482 0.58 +0.6 1,697,679 + Echvi_1482 0.64 -0.9 1,697,679 + Echvi_1482 0.64 -1.4 1,697,679 + Echvi_1482 0.64 -0.2 1,697,680 - Echvi_1482 0.64 -2.0 1,697,716 - Echvi_1482 0.67 +1.2 1,697,716 - Echvi_1482 0.67 -0.0 1,697,716 - Echvi_1482 0.67 +1.3 1,697,736 - Echvi_1482 0.69 -0.7 1,697,861 - Echvi_1482 0.80 +1.6 1,697,894 + Echvi_1482 0.82 +0.1 1,697,894 + Echvi_1482 0.82 -2.0 1,697,963 + Echvi_1482 0.88 +0.3 1,697,963 + Echvi_1482 0.88 +1.5 1,697,964 - Echvi_1482 0.88 -1.0 1,697,964 - Echvi_1482 0.88 -1.1 1,697,964 - Echvi_1482 0.88 +1.0 1,698,072 + -1.1 1,698,117 + -1.0 1,698,132 + -1.0 1,698,132 + -1.1 1,698,132 + +0.5 1,698,132 + +1.7 1,698,132 + -0.4 1,698,132 + +0.3 1,698,132 + -0.2 1,698,132 + +1.3 1,698,132 + -0.3 1,698,133 - -1.2 1,698,133 - +2.2 1,698,133 - -0.6 1,698,133 - -1.4 1,698,134 + -0.5 1,698,134 + -0.3 1,698,208 - -0.9 1,698,243 - +0.3 1,698,243 - +0.6 1,698,243 - +1.3 1,698,262 + Echvi_1483 0.12 +0.2 1,698,272 + Echvi_1483 0.12 +0.3 1,698,273 - Echvi_1483 0.12 -1.8 1,698,307 + Echvi_1483 0.15 -1.0 1,698,314 - Echvi_1483 0.16 -1.8 1,698,316 - Echvi_1483 0.16 -0.9 1,698,362 + Echvi_1483 0.20 -0.1 1,698,362 + Echvi_1483 0.20 +0.2 1,698,366 - Echvi_1483 0.20 -2.3 1,698,383 + Echvi_1483 0.21 +0.7 1,698,383 + Echvi_1483 0.21 -0.3 1,698,383 + Echvi_1483 0.21 +0.4 1,698,384 - Echvi_1483 0.21 +0.7 1,698,384 - Echvi_1483 0.21 -2.8 1,698,386 + Echvi_1483 0.21 +0.0 1,698,386 + Echvi_1483 0.21 +2.6 1,698,392 + Echvi_1483 0.22 -1.4 1,698,392 + Echvi_1483 0.22 -0.8 1,698,393 - Echvi_1483 0.22 -0.0 1,698,393 - Echvi_1483 0.22 -0.8 1,698,398 + Echvi_1483 0.22 -0.7 1,698,413 + Echvi_1483 0.24 -0.0 1,698,414 - Echvi_1483 0.24 -0.6 1,698,425 + Echvi_1483 0.25 +0.8 1,698,425 + Echvi_1483 0.25 -0.8 1,698,475 + Echvi_1483 0.29 -0.3 1,698,541 + Echvi_1483 0.34 -0.6 1,698,541 + Echvi_1483 0.34 -0.2 1,698,541 + Echvi_1483 0.34 -0.0 1,698,648 - Echvi_1483 0.43 -0.1 1,698,653 + Echvi_1483 0.43 -0.4 1,698,654 - Echvi_1483 0.43 +1.3 1,698,659 + Echvi_1483 0.43 +2.2 1,698,674 - Echvi_1483 0.45 -0.6 1,698,708 + Echvi_1483 0.47 +0.1 1,698,727 + Echvi_1483 0.49 -0.2 1,698,727 + Echvi_1483 0.49 -0.2 1,698,728 - Echvi_1483 0.49 -0.7 1,698,728 - Echvi_1483 0.49 -1.2 1,698,737 + Echvi_1483 0.50 +1.3 1,698,738 - Echvi_1483 0.50 +0.6 1,698,744 - Echvi_1483 0.50 -0.6 1,698,762 - Echvi_1483 0.52 -1.0 1,698,785 + Echvi_1483 0.54 +1.1 1,698,785 + Echvi_1483 0.54 +0.7 1,698,836 + Echvi_1483 0.58 +1.1 1,698,837 - Echvi_1483 0.58 +0.9 1,698,837 - Echvi_1483 0.58 +1.3 1,698,837 - Echvi_1483 0.58 -0.2 1,698,878 + Echvi_1483 0.61 -2.1 1,698,879 - Echvi_1483 0.61 -2.1 1,698,892 - Echvi_1483 0.62 -0.3 1,698,914 + Echvi_1483 0.64 +0.8 1,698,915 - Echvi_1483 0.64 +1.2 1,699,002 - Echvi_1483 0.71 -0.7 1,699,037 - Echvi_1483 0.74 +0.4 1,699,086 + Echvi_1483 0.78 -0.9 1,699,086 + Echvi_1483 0.78 -2.1 1,699,087 - Echvi_1483 0.78 -0.8 1,699,094 - Echvi_1483 0.79 -2.0 1,699,094 - Echvi_1483 0.79 -2.6 1,699,097 + Echvi_1483 0.79 -0.4
Or see this region's nucleotide sequence