Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1298 and Echvi_1299 are separated by 299 nucleotides Echvi_1299 and Echvi_1300 are separated by 152 nucleotides
Echvi_1298: Echvi_1298 - hypothetical protein, at 1,493,787 to 1,494,470
_1298
Echvi_1299: Echvi_1299 - hypothetical protein, at 1,494,770 to 1,495,891
_1299
Echvi_1300: Echvi_1300 - delta-1-pyrroline-5-carboxylate dehydrogenase, group 1, at 1,496,044 to 1,497,675
_1300
Position (kb)
1494
1495
1496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1493.774 kb on + strand at 1493.774 kb on + strand at 1493.778 kb on + strand at 1493.778 kb on + strand at 1493.833 kb on + strand at 1493.916 kb on + strand, within Echvi_1298 at 1493.950 kb on + strand, within Echvi_1298 at 1493.950 kb on + strand, within Echvi_1298 at 1493.976 kb on + strand, within Echvi_1298 at 1493.976 kb on + strand, within Echvi_1298 at 1493.977 kb on - strand, within Echvi_1298 at 1493.977 kb on - strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1493.997 kb on + strand, within Echvi_1298 at 1494.036 kb on + strand, within Echvi_1298 at 1494.037 kb on - strand, within Echvi_1298 at 1494.051 kb on + strand, within Echvi_1298 at 1494.102 kb on + strand, within Echvi_1298 at 1494.102 kb on + strand, within Echvi_1298 at 1494.132 kb on + strand, within Echvi_1298 at 1494.231 kb on - strand, within Echvi_1298 at 1494.252 kb on - strand, within Echvi_1298 at 1494.256 kb on - strand, within Echvi_1298 at 1494.288 kb on - strand, within Echvi_1298 at 1494.291 kb on + strand, within Echvi_1298 at 1494.291 kb on + strand, within Echvi_1298 at 1494.292 kb on - strand, within Echvi_1298 at 1494.314 kb on + strand, within Echvi_1298 at 1494.315 kb on - strand, within Echvi_1298 at 1494.315 kb on - strand, within Echvi_1298 at 1494.332 kb on + strand, within Echvi_1298 at 1494.355 kb on + strand, within Echvi_1298 at 1494.355 kb on + strand, within Echvi_1298 at 1494.356 kb on - strand, within Echvi_1298 at 1494.366 kb on + strand, within Echvi_1298 at 1494.366 kb on + strand, within Echvi_1298 at 1494.367 kb on - strand, within Echvi_1298 at 1494.441 kb on + strand at 1494.454 kb on + strand at 1494.455 kb on - strand at 1494.468 kb on + strand at 1494.495 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.499 kb on + strand at 1494.500 kb on - strand at 1494.500 kb on - strand at 1494.500 kb on - strand at 1494.554 kb on + strand at 1494.584 kb on + strand at 1494.585 kb on - strand at 1494.663 kb on + strand at 1494.663 kb on + strand at 1494.664 kb on - strand at 1494.677 kb on + strand at 1494.678 kb on - strand at 1494.701 kb on + strand at 1494.702 kb on - strand at 1494.702 kb on - strand at 1494.705 kb on + strand at 1494.791 kb on + strand at 1494.792 kb on - strand at 1494.792 kb on - strand at 1494.797 kb on - strand at 1494.801 kb on + strand at 1494.802 kb on - strand at 1494.802 kb on - strand at 1494.802 kb on - strand at 1494.802 kb on - strand at 1494.945 kb on + strand, within Echvi_1299 at 1494.946 kb on - strand, within Echvi_1299 at 1494.946 kb on - strand, within Echvi_1299 at 1494.971 kb on + strand, within Echvi_1299 at 1494.972 kb on - strand, within Echvi_1299 at 1494.972 kb on - strand, within Echvi_1299 at 1494.977 kb on + strand, within Echvi_1299 at 1494.977 kb on + strand, within Echvi_1299 at 1494.978 kb on - strand, within Echvi_1299 at 1494.978 kb on - strand, within Echvi_1299 at 1494.978 kb on - strand, within Echvi_1299 at 1494.993 kb on - strand, within Echvi_1299 at 1494.998 kb on + strand, within Echvi_1299 at 1494.999 kb on - strand, within Echvi_1299 at 1495.028 kb on - strand, within Echvi_1299 at 1495.032 kb on + strand, within Echvi_1299 at 1495.032 kb on + strand, within Echvi_1299 at 1495.068 kb on + strand, within Echvi_1299 at 1495.068 kb on + strand, within Echvi_1299 at 1495.069 kb on - strand, within Echvi_1299 at 1495.069 kb on - strand, within Echvi_1299 at 1495.091 kb on - strand, within Echvi_1299 at 1495.130 kb on + strand, within Echvi_1299 at 1495.130 kb on + strand, within Echvi_1299 at 1495.191 kb on + strand, within Echvi_1299 at 1495.191 kb on + strand, within Echvi_1299 at 1495.191 kb on + strand, within Echvi_1299 at 1495.192 kb on - strand, within Echvi_1299 at 1495.192 kb on - strand, within Echvi_1299 at 1495.192 kb on - strand, within Echvi_1299 at 1495.192 kb on - strand, within Echvi_1299 at 1495.215 kb on + strand, within Echvi_1299 at 1495.216 kb on - strand, within Echvi_1299 at 1495.216 kb on - strand, within Echvi_1299 at 1495.250 kb on + strand, within Echvi_1299 at 1495.251 kb on - strand, within Echvi_1299 at 1495.251 kb on - strand, within Echvi_1299 at 1495.263 kb on + strand, within Echvi_1299 at 1495.264 kb on - strand, within Echvi_1299 at 1495.318 kb on - strand, within Echvi_1299 at 1495.338 kb on + strand, within Echvi_1299 at 1495.379 kb on - strand, within Echvi_1299 at 1495.379 kb on - strand, within Echvi_1299 at 1495.400 kb on + strand, within Echvi_1299 at 1495.400 kb on + strand, within Echvi_1299 at 1495.400 kb on + strand, within Echvi_1299 at 1495.400 kb on + strand, within Echvi_1299 at 1495.427 kb on - strand, within Echvi_1299 at 1495.427 kb on - strand, within Echvi_1299 at 1495.427 kb on - strand, within Echvi_1299 at 1495.431 kb on + strand, within Echvi_1299 at 1495.498 kb on + strand, within Echvi_1299 at 1495.498 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.647 kb on + strand, within Echvi_1299 at 1495.661 kb on - strand, within Echvi_1299 at 1495.684 kb on + strand, within Echvi_1299 at 1495.685 kb on - strand, within Echvi_1299 at 1495.711 kb on + strand, within Echvi_1299 at 1495.711 kb on + strand, within Echvi_1299 at 1495.711 kb on + strand, within Echvi_1299 at 1495.735 kb on + strand, within Echvi_1299 at 1495.735 kb on + strand, within Echvi_1299 at 1495.736 kb on - strand, within Echvi_1299 at 1495.736 kb on - strand, within Echvi_1299 at 1495.757 kb on + strand, within Echvi_1299 at 1495.758 kb on - strand, within Echvi_1299 at 1495.762 kb on + strand, within Echvi_1299 at 1495.763 kb on - strand, within Echvi_1299 at 1495.763 kb on - strand, within Echvi_1299 at 1495.819 kb on + strand at 1495.820 kb on - strand at 1495.867 kb on + strand at 1495.868 kb on - strand at 1495.868 kb on - strand at 1495.868 kb on - strand at 1495.868 kb on - strand at 1495.874 kb on - strand at 1495.874 kb on - strand at 1495.879 kb on - strand at 1495.930 kb on + strand at 1495.946 kb on + strand at 1495.961 kb on - strand at 1495.961 kb on - strand at 1495.961 kb on - strand at 1496.013 kb on + strand at 1496.013 kb on + strand at 1496.212 kb on - strand, within Echvi_1300 at 1496.212 kb on - strand, within Echvi_1300 at 1496.226 kb on + strand, within Echvi_1300 at 1496.228 kb on + strand, within Echvi_1300 at 1496.228 kb on + strand, within Echvi_1300 at 1496.228 kb on + strand, within Echvi_1300 at 1496.229 kb on - strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.375 kb on + strand, within Echvi_1300 at 1496.376 kb on - strand, within Echvi_1300 at 1496.376 kb on - strand, within Echvi_1300 at 1496.376 kb on - strand, within Echvi_1300 at 1496.376 kb on - strand, within Echvi_1300 at 1496.376 kb on - strand, within Echvi_1300 at 1496.444 kb on - strand, within Echvi_1300 at 1496.531 kb on + strand, within Echvi_1300 at 1496.531 kb on + strand, within Echvi_1300 at 1496.532 kb on - strand, within Echvi_1300 at 1496.611 kb on - strand, within Echvi_1300 at 1496.673 kb on - strand, within Echvi_1300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,493,774 + -0.4 1,493,774 + +0.4 1,493,778 + -0.6 1,493,778 + +0.5 1,493,833 + -1.3 1,493,916 + Echvi_1298 0.19 -1.2 1,493,950 + Echvi_1298 0.24 +1.0 1,493,950 + Echvi_1298 0.24 -0.8 1,493,976 + Echvi_1298 0.28 +2.2 1,493,976 + Echvi_1298 0.28 +2.1 1,493,977 - Echvi_1298 0.28 -1.5 1,493,977 - Echvi_1298 0.28 -0.7 1,493,997 + Echvi_1298 0.31 -0.3 1,493,997 + Echvi_1298 0.31 +0.8 1,493,997 + Echvi_1298 0.31 +0.2 1,494,036 + Echvi_1298 0.36 -2.1 1,494,037 - Echvi_1298 0.37 +0.5 1,494,051 + Echvi_1298 0.39 +3.4 1,494,102 + Echvi_1298 0.46 +1.0 1,494,102 + Echvi_1298 0.46 -2.3 1,494,132 + Echvi_1298 0.50 -0.5 1,494,231 - Echvi_1298 0.65 -0.5 1,494,252 - Echvi_1298 0.68 -2.7 1,494,256 - Echvi_1298 0.69 -0.9 1,494,288 - Echvi_1298 0.73 +0.5 1,494,291 + Echvi_1298 0.74 -0.8 1,494,291 + Echvi_1298 0.74 -2.0 1,494,292 - Echvi_1298 0.74 -0.3 1,494,314 + Echvi_1298 0.77 -0.0 1,494,315 - Echvi_1298 0.77 -1.4 1,494,315 - Echvi_1298 0.77 -1.1 1,494,332 + Echvi_1298 0.80 -2.1 1,494,355 + Echvi_1298 0.83 +0.2 1,494,355 + Echvi_1298 0.83 +0.7 1,494,356 - Echvi_1298 0.83 +0.5 1,494,366 + Echvi_1298 0.85 +0.2 1,494,366 + Echvi_1298 0.85 +0.9 1,494,367 - Echvi_1298 0.85 -0.8 1,494,441 + -1.0 1,494,454 + -1.4 1,494,455 - +0.7 1,494,468 + -0.2 1,494,495 + -1.0 1,494,499 + -1.6 1,494,499 + +1.4 1,494,499 + -0.9 1,494,499 + +1.0 1,494,500 - -1.2 1,494,500 - +1.3 1,494,500 - -0.8 1,494,554 + -1.7 1,494,584 + +1.2 1,494,585 - +0.4 1,494,663 + -2.5 1,494,663 + -0.4 1,494,664 - +0.7 1,494,677 + -0.4 1,494,678 - -0.7 1,494,701 + +2.7 1,494,702 - +1.7 1,494,702 - -2.5 1,494,705 + -0.9 1,494,791 + -0.2 1,494,792 - -3.1 1,494,792 - +1.3 1,494,797 - +0.4 1,494,801 + +1.1 1,494,802 - +1.4 1,494,802 - +0.3 1,494,802 - +0.2 1,494,802 - -0.1 1,494,945 + Echvi_1299 0.16 +0.4 1,494,946 - Echvi_1299 0.16 +0.5 1,494,946 - Echvi_1299 0.16 +2.4 1,494,971 + Echvi_1299 0.18 -0.9 1,494,972 - Echvi_1299 0.18 -0.9 1,494,972 - Echvi_1299 0.18 +1.6 1,494,977 + Echvi_1299 0.18 +0.8 1,494,977 + Echvi_1299 0.18 +2.0 1,494,978 - Echvi_1299 0.19 -1.1 1,494,978 - Echvi_1299 0.19 +0.1 1,494,978 - Echvi_1299 0.19 +0.5 1,494,993 - Echvi_1299 0.20 +0.3 1,494,998 + Echvi_1299 0.20 -0.8 1,494,999 - Echvi_1299 0.20 -0.4 1,495,028 - Echvi_1299 0.23 +0.2 1,495,032 + Echvi_1299 0.23 +2.0 1,495,032 + Echvi_1299 0.23 -1.4 1,495,068 + Echvi_1299 0.27 -1.2 1,495,068 + Echvi_1299 0.27 -2.8 1,495,069 - Echvi_1299 0.27 -0.7 1,495,069 - Echvi_1299 0.27 -0.8 1,495,091 - Echvi_1299 0.29 -0.9 1,495,130 + Echvi_1299 0.32 +0.0 1,495,130 + Echvi_1299 0.32 +1.4 1,495,191 + Echvi_1299 0.38 -0.5 1,495,191 + Echvi_1299 0.38 -0.2 1,495,191 + Echvi_1299 0.38 +1.0 1,495,192 - Echvi_1299 0.38 +2.0 1,495,192 - Echvi_1299 0.38 -0.8 1,495,192 - Echvi_1299 0.38 -2.1 1,495,192 - Echvi_1299 0.38 -0.1 1,495,215 + Echvi_1299 0.40 -1.1 1,495,216 - Echvi_1299 0.40 +1.3 1,495,216 - Echvi_1299 0.40 -1.2 1,495,250 + Echvi_1299 0.43 -1.3 1,495,251 - Echvi_1299 0.43 +2.2 1,495,251 - Echvi_1299 0.43 +0.6 1,495,263 + Echvi_1299 0.44 -0.1 1,495,264 - Echvi_1299 0.44 +0.6 1,495,318 - Echvi_1299 0.49 +1.4 1,495,338 + Echvi_1299 0.51 +0.4 1,495,379 - Echvi_1299 0.54 -0.1 1,495,379 - Echvi_1299 0.54 -1.2 1,495,400 + Echvi_1299 0.56 +1.2 1,495,400 + Echvi_1299 0.56 -0.2 1,495,400 + Echvi_1299 0.56 +1.4 1,495,400 + Echvi_1299 0.56 -1.6 1,495,427 - Echvi_1299 0.59 -0.8 1,495,427 - Echvi_1299 0.59 +0.8 1,495,427 - Echvi_1299 0.59 +0.7 1,495,431 + Echvi_1299 0.59 +0.2 1,495,498 + Echvi_1299 0.65 +2.4 1,495,498 + Echvi_1299 0.65 -0.7 1,495,647 + Echvi_1299 0.78 +0.4 1,495,647 + Echvi_1299 0.78 +0.4 1,495,647 + Echvi_1299 0.78 +2.7 1,495,647 + Echvi_1299 0.78 -1.2 1,495,647 + Echvi_1299 0.78 -1.4 1,495,647 + Echvi_1299 0.78 +0.6 1,495,661 - Echvi_1299 0.79 +0.7 1,495,684 + Echvi_1299 0.81 +1.0 1,495,685 - Echvi_1299 0.82 +0.4 1,495,711 + Echvi_1299 0.84 +0.0 1,495,711 + Echvi_1299 0.84 -1.3 1,495,711 + Echvi_1299 0.84 +0.4 1,495,735 + Echvi_1299 0.86 -0.8 1,495,735 + Echvi_1299 0.86 +0.1 1,495,736 - Echvi_1299 0.86 -0.2 1,495,736 - Echvi_1299 0.86 -0.7 1,495,757 + Echvi_1299 0.88 +2.0 1,495,758 - Echvi_1299 0.88 -0.7 1,495,762 + Echvi_1299 0.88 +0.6 1,495,763 - Echvi_1299 0.89 -1.0 1,495,763 - Echvi_1299 0.89 -0.5 1,495,819 + +1.6 1,495,820 - -2.1 1,495,867 + -1.3 1,495,868 - +0.2 1,495,868 - +1.0 1,495,868 - -0.4 1,495,868 - -1.0 1,495,874 - +0.4 1,495,874 - +0.2 1,495,879 - -1.9 1,495,930 + -1.6 1,495,946 + -0.4 1,495,961 - +0.7 1,495,961 - -0.6 1,495,961 - +0.1 1,496,013 + +1.0 1,496,013 + +1.5 1,496,212 - Echvi_1300 0.10 +1.8 1,496,212 - Echvi_1300 0.10 +2.5 1,496,226 + Echvi_1300 0.11 +1.8 1,496,228 + Echvi_1300 0.11 +0.3 1,496,228 + Echvi_1300 0.11 +1.3 1,496,228 + Echvi_1300 0.11 +1.8 1,496,229 - Echvi_1300 0.11 +2.0 1,496,375 + Echvi_1300 0.20 +0.8 1,496,375 + Echvi_1300 0.20 +2.1 1,496,375 + Echvi_1300 0.20 +1.4 1,496,375 + Echvi_1300 0.20 +2.2 1,496,375 + Echvi_1300 0.20 +1.0 1,496,375 + Echvi_1300 0.20 +0.9 1,496,376 - Echvi_1300 0.20 +2.5 1,496,376 - Echvi_1300 0.20 +0.3 1,496,376 - Echvi_1300 0.20 +1.4 1,496,376 - Echvi_1300 0.20 -1.3 1,496,376 - Echvi_1300 0.20 -0.2 1,496,444 - Echvi_1300 0.25 +0.4 1,496,531 + Echvi_1300 0.30 +3.4 1,496,531 + Echvi_1300 0.30 +2.0 1,496,532 - Echvi_1300 0.30 +0.8 1,496,611 - Echvi_1300 0.35 +1.1 1,496,673 - Echvi_1300 0.39 -0.1
Or see this region's nucleotide sequence