Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1209 and Echvi_1210 overlap by 41 nucleotides Echvi_1210 and Echvi_1211 overlap by 18 nucleotides Echvi_1211 and Echvi_1212 are separated by 139 nucleotides
Echvi_1209: Echvi_1209 - hypothetical protein, at 1,386,268 to 1,386,633
_1209
Echvi_1210: Echvi_1210 - phosphoglycerol geranylgeranyltransferase, at 1,386,593 to 1,387,399
_1210
Echvi_1211: Echvi_1211 - Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 1,387,382 to 1,388,311
_1211
Echvi_1212: Echvi_1212 - Acyl-CoA dehydrogenases, at 1,388,451 to 1,389,590
_1212
Position (kb)
1387
1388
1389 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1386.393 kb on + strand, within Echvi_1209 at 1386.393 kb on + strand, within Echvi_1209 at 1386.394 kb on - strand, within Echvi_1209 at 1386.394 kb on - strand, within Echvi_1209 at 1386.394 kb on - strand, within Echvi_1209 at 1386.399 kb on + strand, within Echvi_1209 at 1386.400 kb on - strand, within Echvi_1209 at 1386.400 kb on - strand, within Echvi_1209 at 1386.400 kb on - strand, within Echvi_1209 at 1386.493 kb on + strand, within Echvi_1209 at 1386.494 kb on - strand, within Echvi_1209 at 1386.496 kb on - strand, within Echvi_1209 at 1386.496 kb on - strand, within Echvi_1209 at 1386.496 kb on - strand, within Echvi_1209 at 1386.497 kb on + strand, within Echvi_1209 at 1386.498 kb on - strand, within Echvi_1209 at 1386.498 kb on - strand, within Echvi_1209 at 1386.572 kb on + strand, within Echvi_1209 at 1386.582 kb on + strand, within Echvi_1209 at 1386.583 kb on - strand, within Echvi_1209 at 1386.583 kb on - strand, within Echvi_1209 at 1386.583 kb on - strand, within Echvi_1209 at 1386.596 kb on + strand at 1386.596 kb on + strand at 1386.596 kb on + strand at 1386.596 kb on + strand at 1386.655 kb on - strand at 1386.655 kb on - strand at 1386.763 kb on + strand, within Echvi_1210 at 1386.763 kb on + strand, within Echvi_1210 at 1386.764 kb on - strand, within Echvi_1210 at 1386.796 kb on - strand, within Echvi_1210 at 1386.808 kb on + strand, within Echvi_1210 at 1386.809 kb on - strand, within Echvi_1210 at 1387.022 kb on + strand, within Echvi_1210 at 1387.023 kb on - strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.024 kb on + strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.025 kb on - strand, within Echvi_1210 at 1387.061 kb on + strand, within Echvi_1210 at 1387.062 kb on - strand, within Echvi_1210 at 1387.062 kb on - strand, within Echvi_1210 at 1387.078 kb on - strand, within Echvi_1210 at 1387.093 kb on + strand, within Echvi_1210 at 1387.093 kb on + strand, within Echvi_1210 at 1387.093 kb on + strand, within Echvi_1210 at 1387.094 kb on - strand, within Echvi_1210 at 1387.094 kb on - strand, within Echvi_1210 at 1387.149 kb on - strand, within Echvi_1210 at 1387.225 kb on - strand, within Echvi_1210 at 1387.225 kb on - strand, within Echvi_1210 at 1387.225 kb on - strand, within Echvi_1210 at 1387.225 kb on - strand, within Echvi_1210 at 1387.362 kb on + strand at 1387.362 kb on + strand at 1387.362 kb on + strand at 1387.373 kb on + strand at 1387.394 kb on - strand at 1387.437 kb on + strand at 1387.437 kb on + strand at 1387.438 kb on - strand at 1387.464 kb on + strand at 1387.465 kb on - strand at 1387.465 kb on - strand at 1387.471 kb on + strand at 1387.492 kb on + strand, within Echvi_1211 at 1387.519 kb on + strand, within Echvi_1211 at 1387.522 kb on + strand, within Echvi_1211 at 1387.529 kb on + strand, within Echvi_1211 at 1387.529 kb on + strand, within Echvi_1211 at 1387.566 kb on + strand, within Echvi_1211 at 1387.567 kb on - strand, within Echvi_1211 at 1387.610 kb on + strand, within Echvi_1211 at 1387.611 kb on - strand, within Echvi_1211 at 1387.611 kb on - strand, within Echvi_1211 at 1387.614 kb on + strand, within Echvi_1211 at 1387.614 kb on + strand, within Echvi_1211 at 1387.614 kb on + strand, within Echvi_1211 at 1387.614 kb on + strand, within Echvi_1211 at 1387.614 kb on + strand, within Echvi_1211 at 1387.625 kb on + strand, within Echvi_1211 at 1387.646 kb on + strand, within Echvi_1211 at 1387.646 kb on + strand, within Echvi_1211 at 1387.646 kb on + strand, within Echvi_1211 at 1387.646 kb on + strand, within Echvi_1211 at 1387.646 kb on + strand, within Echvi_1211 at 1387.686 kb on + strand, within Echvi_1211 at 1387.686 kb on + strand, within Echvi_1211 at 1387.726 kb on + strand, within Echvi_1211 at 1387.726 kb on + strand, within Echvi_1211 at 1387.726 kb on + strand, within Echvi_1211 at 1387.778 kb on + strand, within Echvi_1211 at 1387.816 kb on + strand, within Echvi_1211 at 1387.903 kb on + strand, within Echvi_1211 at 1387.999 kb on + strand, within Echvi_1211 at 1387.999 kb on + strand, within Echvi_1211 at 1387.999 kb on + strand, within Echvi_1211 at 1388.000 kb on - strand, within Echvi_1211 at 1388.000 kb on - strand, within Echvi_1211 at 1388.000 kb on - strand, within Echvi_1211 at 1388.000 kb on - strand, within Echvi_1211 at 1388.016 kb on - strand, within Echvi_1211 at 1388.024 kb on + strand, within Echvi_1211 at 1388.025 kb on - strand, within Echvi_1211 at 1388.148 kb on - strand, within Echvi_1211 at 1388.148 kb on - strand, within Echvi_1211 at 1388.172 kb on - strand, within Echvi_1211 at 1388.190 kb on - strand, within Echvi_1211 at 1388.213 kb on + strand, within Echvi_1211 at 1388.213 kb on + strand, within Echvi_1211 at 1388.213 kb on + strand, within Echvi_1211 at 1388.213 kb on + strand, within Echvi_1211 at 1388.214 kb on - strand, within Echvi_1211 at 1388.233 kb on + strand at 1388.233 kb on + strand at 1388.233 kb on - strand at 1388.234 kb on - strand at 1388.234 kb on - strand at 1388.234 kb on - strand at 1388.244 kb on - strand at 1388.250 kb on + strand at 1388.250 kb on + strand at 1388.251 kb on - strand at 1388.269 kb on - strand at 1388.339 kb on - strand at 1388.365 kb on - strand at 1388.401 kb on + strand at 1388.401 kb on + strand at 1388.474 kb on + strand at 1388.474 kb on + strand at 1388.478 kb on + strand at 1388.544 kb on + strand at 1388.586 kb on + strand, within Echvi_1212 at 1388.587 kb on - strand, within Echvi_1212 at 1388.626 kb on + strand, within Echvi_1212 at 1388.626 kb on + strand, within Echvi_1212 at 1388.676 kb on - strand, within Echvi_1212 at 1388.737 kb on - strand, within Echvi_1212 at 1388.801 kb on - strand, within Echvi_1212 at 1388.818 kb on + strand, within Echvi_1212 at 1388.819 kb on - strand, within Echvi_1212 at 1388.819 kb on - strand, within Echvi_1212 at 1388.859 kb on + strand, within Echvi_1212 at 1388.859 kb on + strand, within Echvi_1212 at 1388.860 kb on - strand, within Echvi_1212 at 1388.891 kb on - strand, within Echvi_1212 at 1388.891 kb on - strand, within Echvi_1212 at 1388.991 kb on - strand, within Echvi_1212 at 1388.991 kb on - strand, within Echvi_1212 at 1389.039 kb on - strand, within Echvi_1212 at 1389.095 kb on - strand, within Echvi_1212 at 1389.095 kb on - strand, within Echvi_1212 at 1389.095 kb on - strand, within Echvi_1212 at 1389.095 kb on - strand, within Echvi_1212 at 1389.096 kb on + strand, within Echvi_1212 at 1389.097 kb on - strand, within Echvi_1212 at 1389.148 kb on + strand, within Echvi_1212 at 1389.176 kb on + strand, within Echvi_1212 at 1389.258 kb on + strand, within Echvi_1212 at 1389.263 kb on - strand, within Echvi_1212
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,386,393 + Echvi_1209 0.34 -0.6 1,386,393 + Echvi_1209 0.34 +2.5 1,386,394 - Echvi_1209 0.34 -1.1 1,386,394 - Echvi_1209 0.34 -0.5 1,386,394 - Echvi_1209 0.34 -1.2 1,386,399 + Echvi_1209 0.36 -1.3 1,386,400 - Echvi_1209 0.36 +1.0 1,386,400 - Echvi_1209 0.36 -2.0 1,386,400 - Echvi_1209 0.36 -1.7 1,386,493 + Echvi_1209 0.61 -1.9 1,386,494 - Echvi_1209 0.62 -0.6 1,386,496 - Echvi_1209 0.62 -1.4 1,386,496 - Echvi_1209 0.62 +0.6 1,386,496 - Echvi_1209 0.62 +0.2 1,386,497 + Echvi_1209 0.63 +0.7 1,386,498 - Echvi_1209 0.63 -2.9 1,386,498 - Echvi_1209 0.63 +1.1 1,386,572 + Echvi_1209 0.83 -0.3 1,386,582 + Echvi_1209 0.86 +0.5 1,386,583 - Echvi_1209 0.86 -0.7 1,386,583 - Echvi_1209 0.86 +0.1 1,386,583 - Echvi_1209 0.86 +0.1 1,386,596 + -0.9 1,386,596 + +0.2 1,386,596 + +0.3 1,386,596 + +1.3 1,386,655 - +0.2 1,386,655 - -0.4 1,386,763 + Echvi_1210 0.21 +0.9 1,386,763 + Echvi_1210 0.21 -0.1 1,386,764 - Echvi_1210 0.21 +1.0 1,386,796 - Echvi_1210 0.25 -0.3 1,386,808 + Echvi_1210 0.27 +0.2 1,386,809 - Echvi_1210 0.27 -1.3 1,387,022 + Echvi_1210 0.53 +0.9 1,387,023 - Echvi_1210 0.53 +0.2 1,387,024 + Echvi_1210 0.53 +0.4 1,387,024 + Echvi_1210 0.53 +1.7 1,387,024 + Echvi_1210 0.53 +0.7 1,387,024 + Echvi_1210 0.53 +0.1 1,387,024 + Echvi_1210 0.53 -0.1 1,387,024 + Echvi_1210 0.53 +0.0 1,387,024 + Echvi_1210 0.53 -1.5 1,387,024 + Echvi_1210 0.53 +1.7 1,387,024 + Echvi_1210 0.53 +0.5 1,387,024 + Echvi_1210 0.53 -0.6 1,387,024 + Echvi_1210 0.53 +1.4 1,387,024 + Echvi_1210 0.53 +1.3 1,387,024 + Echvi_1210 0.53 -0.5 1,387,024 + Echvi_1210 0.53 -0.9 1,387,024 + Echvi_1210 0.53 +0.4 1,387,024 + Echvi_1210 0.53 +0.8 1,387,025 - Echvi_1210 0.54 -1.7 1,387,025 - Echvi_1210 0.54 +0.8 1,387,025 - Echvi_1210 0.54 -0.2 1,387,025 - Echvi_1210 0.54 -0.1 1,387,025 - Echvi_1210 0.54 +0.7 1,387,025 - Echvi_1210 0.54 +0.9 1,387,025 - Echvi_1210 0.54 +0.4 1,387,025 - Echvi_1210 0.54 +0.2 1,387,025 - Echvi_1210 0.54 +1.6 1,387,025 - Echvi_1210 0.54 +2.0 1,387,025 - Echvi_1210 0.54 +0.1 1,387,025 - Echvi_1210 0.54 -0.4 1,387,025 - Echvi_1210 0.54 +0.4 1,387,061 + Echvi_1210 0.58 +0.7 1,387,062 - Echvi_1210 0.58 -0.7 1,387,062 - Echvi_1210 0.58 -1.7 1,387,078 - Echvi_1210 0.60 +0.0 1,387,093 + Echvi_1210 0.62 +1.0 1,387,093 + Echvi_1210 0.62 -0.6 1,387,093 + Echvi_1210 0.62 +1.7 1,387,094 - Echvi_1210 0.62 +1.4 1,387,094 - Echvi_1210 0.62 +1.8 1,387,149 - Echvi_1210 0.69 -0.9 1,387,225 - Echvi_1210 0.78 -0.5 1,387,225 - Echvi_1210 0.78 -1.2 1,387,225 - Echvi_1210 0.78 +1.8 1,387,225 - Echvi_1210 0.78 -0.1 1,387,362 + -1.6 1,387,362 + +0.7 1,387,362 + -2.8 1,387,373 + +0.0 1,387,394 - -0.9 1,387,437 + -2.5 1,387,437 + -0.5 1,387,438 - -0.6 1,387,464 + -1.4 1,387,465 - -0.8 1,387,465 - -0.8 1,387,471 + -1.2 1,387,492 + Echvi_1211 0.12 -1.7 1,387,519 + Echvi_1211 0.15 +0.6 1,387,522 + Echvi_1211 0.15 -2.5 1,387,529 + Echvi_1211 0.16 -1.5 1,387,529 + Echvi_1211 0.16 -1.2 1,387,566 + Echvi_1211 0.20 -2.0 1,387,567 - Echvi_1211 0.20 -1.1 1,387,610 + Echvi_1211 0.25 +0.7 1,387,611 - Echvi_1211 0.25 -2.6 1,387,611 - Echvi_1211 0.25 +0.2 1,387,614 + Echvi_1211 0.25 -1.9 1,387,614 + Echvi_1211 0.25 +0.2 1,387,614 + Echvi_1211 0.25 -2.8 1,387,614 + Echvi_1211 0.25 -0.8 1,387,614 + Echvi_1211 0.25 -2.3 1,387,625 + Echvi_1211 0.26 -1.7 1,387,646 + Echvi_1211 0.28 -1.8 1,387,646 + Echvi_1211 0.28 -0.5 1,387,646 + Echvi_1211 0.28 -0.8 1,387,646 + Echvi_1211 0.28 -1.9 1,387,646 + Echvi_1211 0.28 -2.1 1,387,686 + Echvi_1211 0.33 -2.0 1,387,686 + Echvi_1211 0.33 -2.4 1,387,726 + Echvi_1211 0.37 +3.0 1,387,726 + Echvi_1211 0.37 +1.0 1,387,726 + Echvi_1211 0.37 -1.3 1,387,778 + Echvi_1211 0.43 -3.7 1,387,816 + Echvi_1211 0.47 -0.3 1,387,903 + Echvi_1211 0.56 -1.9 1,387,999 + Echvi_1211 0.66 -1.7 1,387,999 + Echvi_1211 0.66 +0.2 1,387,999 + Echvi_1211 0.66 -3.9 1,388,000 - Echvi_1211 0.66 +0.2 1,388,000 - Echvi_1211 0.66 +1.0 1,388,000 - Echvi_1211 0.66 -2.3 1,388,000 - Echvi_1211 0.66 +1.0 1,388,016 - Echvi_1211 0.68 -2.7 1,388,024 + Echvi_1211 0.69 -1.4 1,388,025 - Echvi_1211 0.69 +0.2 1,388,148 - Echvi_1211 0.82 -1.5 1,388,148 - Echvi_1211 0.82 -0.5 1,388,172 - Echvi_1211 0.85 -0.0 1,388,190 - Echvi_1211 0.87 -2.3 1,388,213 + Echvi_1211 0.89 +0.4 1,388,213 + Echvi_1211 0.89 -0.0 1,388,213 + Echvi_1211 0.89 -1.9 1,388,213 + Echvi_1211 0.89 -1.9 1,388,214 - Echvi_1211 0.89 -0.7 1,388,233 + -3.0 1,388,233 + -2.9 1,388,233 - -1.7 1,388,234 - +2.0 1,388,234 - -2.1 1,388,234 - -2.8 1,388,244 - -0.3 1,388,250 + -2.4 1,388,250 + -2.9 1,388,251 - -0.6 1,388,269 - -2.6 1,388,339 - -0.2 1,388,365 - +2.8 1,388,401 + +1.2 1,388,401 + +0.2 1,388,474 + +0.6 1,388,474 + +0.1 1,388,478 + +1.5 1,388,544 + -0.4 1,388,586 + Echvi_1212 0.12 -1.8 1,388,587 - Echvi_1212 0.12 +1.9 1,388,626 + Echvi_1212 0.15 -1.1 1,388,626 + Echvi_1212 0.15 +1.5 1,388,676 - Echvi_1212 0.20 -1.4 1,388,737 - Echvi_1212 0.25 +0.8 1,388,801 - Echvi_1212 0.31 -0.2 1,388,818 + Echvi_1212 0.32 -0.5 1,388,819 - Echvi_1212 0.32 +0.9 1,388,819 - Echvi_1212 0.32 +1.6 1,388,859 + Echvi_1212 0.36 +0.5 1,388,859 + Echvi_1212 0.36 +0.1 1,388,860 - Echvi_1212 0.36 -2.1 1,388,891 - Echvi_1212 0.39 +1.6 1,388,891 - Echvi_1212 0.39 +0.6 1,388,991 - Echvi_1212 0.47 +1.0 1,388,991 - Echvi_1212 0.47 +0.2 1,389,039 - Echvi_1212 0.52 +3.0 1,389,095 - Echvi_1212 0.56 +1.0 1,389,095 - Echvi_1212 0.56 -1.9 1,389,095 - Echvi_1212 0.56 +0.1 1,389,095 - Echvi_1212 0.56 +1.0 1,389,096 + Echvi_1212 0.57 -1.0 1,389,097 - Echvi_1212 0.57 +1.5 1,389,148 + Echvi_1212 0.61 +0.9 1,389,176 + Echvi_1212 0.64 -1.7 1,389,258 + Echvi_1212 0.71 +0.4 1,389,263 - Echvi_1212 0.71 -0.2
Or see this region's nucleotide sequence