Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0884 and Echvi_0885 are separated by 3 nucleotides Echvi_0885 and Echvi_0886 are separated by 286 nucleotides
Echvi_0884: Echvi_0884 - phosphoribosylaminoimidazole carboxylase, PurK protein, at 1,013,872 to 1,015,011
_0884
Echvi_0885: Echvi_0885 - phosphoribosylaminoimidazole carboxylase, PurE protein, at 1,015,015 to 1,015,530
_0885
Echvi_0886: Echvi_0886 - hypothetical protein, at 1,015,817 to 1,016,245
_0886
Position (kb)
1013
1014
1015
1016 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1012.893 kb on + strand at 1012.894 kb on - strand at 1012.894 kb on - strand at 1012.897 kb on + strand at 1012.897 kb on + strand at 1012.897 kb on + strand at 1012.897 kb on + strand at 1012.898 kb on - strand at 1012.905 kb on + strand at 1012.910 kb on + strand at 1012.910 kb on + strand at 1012.911 kb on - strand at 1012.911 kb on - strand at 1012.959 kb on - strand at 1012.959 kb on - strand at 1012.959 kb on - strand at 1012.959 kb on - strand at 1012.964 kb on - strand at 1012.964 kb on - strand at 1012.964 kb on - strand at 1012.964 kb on - strand at 1012.964 kb on - strand at 1012.964 kb on - strand at 1012.966 kb on - strand at 1012.966 kb on - strand at 1012.966 kb on - strand at 1012.966 kb on - strand at 1012.968 kb on - strand at 1012.968 kb on - strand at 1012.968 kb on - strand at 1012.968 kb on - strand at 1012.968 kb on - strand at 1012.971 kb on - strand at 1013.003 kb on + strand at 1013.068 kb on + strand at 1013.069 kb on - strand at 1013.113 kb on + strand at 1013.476 kb on - strand at 1013.479 kb on - strand at 1013.479 kb on - strand at 1013.479 kb on - strand at 1013.479 kb on - strand at 1013.479 kb on - strand at 1013.480 kb on + strand at 1013.480 kb on + strand at 1013.481 kb on - strand at 1013.499 kb on + strand at 1013.499 kb on + strand at 1013.499 kb on + strand at 1013.510 kb on + strand at 1013.510 kb on + strand at 1013.511 kb on - strand at 1013.511 kb on - strand at 1013.596 kb on + strand at 1013.608 kb on - strand at 1013.632 kb on + strand at 1013.633 kb on - strand at 1013.692 kb on + strand at 1013.693 kb on - strand at 1013.693 kb on - strand at 1013.753 kb on + strand at 1013.753 kb on + strand at 1013.754 kb on - strand at 1013.755 kb on + strand at 1013.755 kb on + strand at 1013.755 kb on + strand at 1013.756 kb on - strand at 1013.800 kb on + strand at 1013.800 kb on + strand at 1013.800 kb on + strand at 1013.867 kb on + strand at 1015.528 kb on + strand at 1015.528 kb on + strand at 1015.547 kb on - strand at 1015.605 kb on + strand at 1015.621 kb on + strand at 1015.622 kb on - strand at 1015.642 kb on + strand at 1015.642 kb on + strand at 1015.643 kb on - strand at 1015.666 kb on + strand at 1015.666 kb on + strand at 1015.692 kb on - strand at 1015.781 kb on + strand at 1015.822 kb on + strand at 1015.838 kb on - strand at 1015.891 kb on - strand, within Echvi_0886 at 1015.891 kb on - strand, within Echvi_0886 at 1015.964 kb on + strand, within Echvi_0886 at 1015.965 kb on - strand, within Echvi_0886 at 1015.965 kb on - strand, within Echvi_0886
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,012,893 + +0.4 1,012,894 - -0.0 1,012,894 - -2.3 1,012,897 + +2.6 1,012,897 + -1.5 1,012,897 + +0.5 1,012,897 + -0.9 1,012,898 - -0.0 1,012,905 + +1.5 1,012,910 + -0.7 1,012,910 + +1.8 1,012,911 - -1.3 1,012,911 - -0.0 1,012,959 - +0.4 1,012,959 - +0.2 1,012,959 - +0.3 1,012,959 - +0.7 1,012,964 - -0.4 1,012,964 - +0.7 1,012,964 - -1.2 1,012,964 - -1.2 1,012,964 - -0.2 1,012,964 - -1.5 1,012,966 - -0.3 1,012,966 - +1.4 1,012,966 - -1.2 1,012,966 - -0.2 1,012,968 - -0.3 1,012,968 - +1.7 1,012,968 - -0.6 1,012,968 - -1.1 1,012,968 - -0.7 1,012,971 - -0.3 1,013,003 + -4.1 1,013,068 + -2.0 1,013,069 - +1.1 1,013,113 + +0.4 1,013,476 - +0.7 1,013,479 - -0.3 1,013,479 - +0.2 1,013,479 - -0.3 1,013,479 - +1.3 1,013,479 - -2.2 1,013,480 + -0.7 1,013,480 + -1.9 1,013,481 - +0.6 1,013,499 + -0.0 1,013,499 + -2.2 1,013,499 + +1.3 1,013,510 + -0.0 1,013,510 + -1.8 1,013,511 - +1.0 1,013,511 - +0.4 1,013,596 + +1.5 1,013,608 - +0.2 1,013,632 + -1.7 1,013,633 - -0.0 1,013,692 + -0.7 1,013,693 - +1.6 1,013,693 - +0.7 1,013,753 + +0.2 1,013,753 + +0.2 1,013,754 - +1.7 1,013,755 + -0.0 1,013,755 + +1.1 1,013,755 + -0.9 1,013,756 - +2.0 1,013,800 + +1.2 1,013,800 + -1.1 1,013,800 + -1.3 1,013,867 + +1.4 1,015,528 + -0.2 1,015,528 + -0.8 1,015,547 - +2.0 1,015,605 + -0.0 1,015,621 + +0.8 1,015,622 - +0.4 1,015,642 + +0.2 1,015,642 + -0.9 1,015,643 - -0.1 1,015,666 + -1.5 1,015,666 + -0.6 1,015,692 - -2.5 1,015,781 + +0.7 1,015,822 + -2.1 1,015,838 - -0.0 1,015,891 - Echvi_0886 0.17 -0.0 1,015,891 - Echvi_0886 0.17 +0.7 1,015,964 + Echvi_0886 0.34 -2.2 1,015,965 - Echvi_0886 0.34 +1.4 1,015,965 - Echvi_0886 0.34 -0.7
Or see this region's nucleotide sequence