Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2262

Experiment: m.b. 5-Hydroxymethylfurfural 4 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2260 and B158DRAFT_2261 are separated by 299 nucleotidesB158DRAFT_2261 and B158DRAFT_2262 are separated by 37 nucleotidesB158DRAFT_2262 and B158DRAFT_2263 are separated by 19 nucleotidesB158DRAFT_2263 and B158DRAFT_2264 are separated by 54 nucleotides B158DRAFT_2260: B158DRAFT_2260 - signal recognition particle subunit FFH/SRP54 (srp54), at 423,894 to 425,294 _2260 B158DRAFT_2261: B158DRAFT_2261 - ribosomal protein S16, at 425,594 to 425,839 _2261 B158DRAFT_2262: B158DRAFT_2262 - 16S rRNA processing protein RimM, at 425,877 to 426,398 _2262 B158DRAFT_2263: B158DRAFT_2263 - tRNA (guanine-N1)-methyltransferase, at 426,418 to 427,185 _2263 B158DRAFT_2264: B158DRAFT_2264 - ribosomal protein L19, bacterial type, at 427,240 to 427,596 _2264 Position (kb) 425 426 427Strain fitness (log2 ratio) -1 0 1at 425.207 kb on - strandat 425.257 kb on + strandat 425.404 kb on - strandat 425.416 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 4 mM
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425,207 - -1.3
425,257 + -0.9
425,404 - -0.2
425,416 - -0.3

Or see this region's nucleotide sequence