Experiment: m.b. 5-Hydroxymethylfurfural 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1292 and B158DRAFT_1293 are separated by 17 nucleotides B158DRAFT_1293 and B158DRAFT_1294 are separated by 93 nucleotides
B158DRAFT_1292: B158DRAFT_1292 - hypothetical protein, at 1,336,852 to 1,340,016
_1292
B158DRAFT_1293: B158DRAFT_1293 - 6-pyruvoyl-tetrahydropterin synthase, at 1,340,034 to 1,340,885
_1293
B158DRAFT_1294: B158DRAFT_1294 - Sugar kinases, ribokinase family, at 1,340,979 to 1,341,986
_1294
Position (kb)
1340
1341 Strain fitness (log2 ratio)
-1
0
1 at 1339.080 kb on + strand, within B158DRAFT_1292 at 1339.094 kb on + strand, within B158DRAFT_1292 at 1339.098 kb on - strand, within B158DRAFT_1292 at 1339.229 kb on + strand, within B158DRAFT_1292 at 1339.229 kb on + strand, within B158DRAFT_1292 at 1339.235 kb on - strand, within B158DRAFT_1292 at 1339.248 kb on + strand, within B158DRAFT_1292 at 1339.256 kb on - strand, within B158DRAFT_1292 at 1339.293 kb on - strand, within B158DRAFT_1292 at 1339.328 kb on - strand, within B158DRAFT_1292 at 1339.450 kb on + strand, within B158DRAFT_1292 at 1339.450 kb on - strand, within B158DRAFT_1292 at 1339.477 kb on + strand, within B158DRAFT_1292 at 1339.486 kb on + strand, within B158DRAFT_1292 at 1339.494 kb on - strand, within B158DRAFT_1292 at 1339.523 kb on + strand, within B158DRAFT_1292 at 1339.533 kb on + strand, within B158DRAFT_1292 at 1339.743 kb on + strand at 1339.751 kb on - strand at 1339.751 kb on - strand at 1339.785 kb on - strand at 1339.793 kb on + strand at 1339.809 kb on + strand at 1339.851 kb on + strand at 1339.856 kb on + strand at 1339.867 kb on + strand at 1339.875 kb on - strand at 1339.895 kb on + strand at 1339.927 kb on + strand at 1339.932 kb on + strand at 1339.932 kb on + strand at 1339.940 kb on - strand at 1339.944 kb on + strand at 1340.032 kb on - strand at 1340.122 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.149 kb on + strand, within B158DRAFT_1293 at 1340.157 kb on - strand, within B158DRAFT_1293 at 1340.162 kb on - strand, within B158DRAFT_1293 at 1340.167 kb on - strand, within B158DRAFT_1293 at 1340.235 kb on + strand, within B158DRAFT_1293 at 1340.243 kb on - strand, within B158DRAFT_1293 at 1340.284 kb on - strand, within B158DRAFT_1293 at 1340.307 kb on - strand, within B158DRAFT_1293 at 1340.311 kb on + strand, within B158DRAFT_1293 at 1340.355 kb on + strand, within B158DRAFT_1293 at 1340.501 kb on + strand, within B158DRAFT_1293 at 1340.501 kb on + strand, within B158DRAFT_1293 at 1340.567 kb on + strand, within B158DRAFT_1293 at 1340.574 kb on + strand, within B158DRAFT_1293 at 1340.575 kb on - strand, within B158DRAFT_1293 at 1340.586 kb on + strand, within B158DRAFT_1293 at 1340.678 kb on - strand, within B158DRAFT_1293 at 1340.755 kb on + strand, within B158DRAFT_1293 at 1341.000 kb on + strand at 1341.144 kb on - strand, within B158DRAFT_1294 at 1341.173 kb on - strand, within B158DRAFT_1294 at 1341.173 kb on - strand, within B158DRAFT_1294 at 1341.237 kb on - strand, within B158DRAFT_1294 at 1341.248 kb on + strand, within B158DRAFT_1294 at 1341.256 kb on - strand, within B158DRAFT_1294 at 1341.261 kb on + strand, within B158DRAFT_1294 at 1341.261 kb on + strand, within B158DRAFT_1294 at 1341.261 kb on + strand, within B158DRAFT_1294 at 1341.269 kb on - strand, within B158DRAFT_1294 at 1341.271 kb on + strand, within B158DRAFT_1294 at 1341.271 kb on + strand, within B158DRAFT_1294 at 1341.321 kb on + strand, within B158DRAFT_1294 at 1341.322 kb on - strand, within B158DRAFT_1294 at 1341.329 kb on - strand, within B158DRAFT_1294 at 1341.346 kb on + strand, within B158DRAFT_1294 at 1341.348 kb on - strand, within B158DRAFT_1294 at 1341.402 kb on + strand, within B158DRAFT_1294 at 1341.436 kb on + strand, within B158DRAFT_1294 at 1341.436 kb on + strand, within B158DRAFT_1294 at 1341.464 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.518 kb on + strand, within B158DRAFT_1294 at 1341.526 kb on + strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.526 kb on - strand, within B158DRAFT_1294 at 1341.607 kb on + strand, within B158DRAFT_1294 at 1341.649 kb on + strand, within B158DRAFT_1294 at 1341.697 kb on + strand, within B158DRAFT_1294 at 1341.720 kb on - strand, within B158DRAFT_1294 at 1341.790 kb on - strand, within B158DRAFT_1294 at 1341.800 kb on - strand, within B158DRAFT_1294 at 1341.810 kb on + strand, within B158DRAFT_1294 at 1341.810 kb on + strand, within B158DRAFT_1294 at 1341.824 kb on - strand, within B158DRAFT_1294 at 1341.824 kb on - strand, within B158DRAFT_1294 at 1341.841 kb on + strand, within B158DRAFT_1294 at 1341.851 kb on + strand, within B158DRAFT_1294
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 4 mM remove 1,339,080 + B158DRAFT_1292 0.70 -1.2 1,339,094 + B158DRAFT_1292 0.71 -0.2 1,339,098 - B158DRAFT_1292 0.71 +0.6 1,339,229 + B158DRAFT_1292 0.75 -0.0 1,339,229 + B158DRAFT_1292 0.75 +0.3 1,339,235 - B158DRAFT_1292 0.75 -0.2 1,339,248 + B158DRAFT_1292 0.76 +0.1 1,339,256 - B158DRAFT_1292 0.76 -1.0 1,339,293 - B158DRAFT_1292 0.77 +0.7 1,339,328 - B158DRAFT_1292 0.78 +0.0 1,339,450 + B158DRAFT_1292 0.82 -0.5 1,339,450 - B158DRAFT_1292 0.82 -0.0 1,339,477 + B158DRAFT_1292 0.83 -0.0 1,339,486 + B158DRAFT_1292 0.83 -0.1 1,339,494 - B158DRAFT_1292 0.83 -0.1 1,339,523 + B158DRAFT_1292 0.84 -0.2 1,339,533 + B158DRAFT_1292 0.85 -0.1 1,339,743 + -0.0 1,339,751 - +0.0 1,339,751 - -0.2 1,339,785 - -0.1 1,339,793 + +0.1 1,339,809 + -0.1 1,339,851 + +0.1 1,339,856 + +1.5 1,339,867 + +0.7 1,339,875 - -0.1 1,339,895 + -0.1 1,339,927 + +0.1 1,339,932 + -0.1 1,339,932 + -0.1 1,339,940 - -0.1 1,339,944 + +0.0 1,340,032 - +0.2 1,340,122 + B158DRAFT_1293 0.10 -0.0 1,340,149 + B158DRAFT_1293 0.13 -0.6 1,340,149 + B158DRAFT_1293 0.13 -0.5 1,340,149 + B158DRAFT_1293 0.13 +0.3 1,340,157 - B158DRAFT_1293 0.14 -0.6 1,340,162 - B158DRAFT_1293 0.15 -0.2 1,340,167 - B158DRAFT_1293 0.16 -0.3 1,340,235 + B158DRAFT_1293 0.24 -0.2 1,340,243 - B158DRAFT_1293 0.25 +0.6 1,340,284 - B158DRAFT_1293 0.29 -0.7 1,340,307 - B158DRAFT_1293 0.32 -0.9 1,340,311 + B158DRAFT_1293 0.33 +0.0 1,340,355 + B158DRAFT_1293 0.38 -0.5 1,340,501 + B158DRAFT_1293 0.55 -0.4 1,340,501 + B158DRAFT_1293 0.55 -0.2 1,340,567 + B158DRAFT_1293 0.63 -0.3 1,340,574 + B158DRAFT_1293 0.63 -0.1 1,340,575 - B158DRAFT_1293 0.63 -0.8 1,340,586 + B158DRAFT_1293 0.65 -0.4 1,340,678 - B158DRAFT_1293 0.76 +0.9 1,340,755 + B158DRAFT_1293 0.85 +0.1 1,341,000 + -0.3 1,341,144 - B158DRAFT_1294 0.16 +0.6 1,341,173 - B158DRAFT_1294 0.19 +0.2 1,341,173 - B158DRAFT_1294 0.19 +0.3 1,341,237 - B158DRAFT_1294 0.26 +0.3 1,341,248 + B158DRAFT_1294 0.27 -0.0 1,341,256 - B158DRAFT_1294 0.27 -0.4 1,341,261 + B158DRAFT_1294 0.28 +0.4 1,341,261 + B158DRAFT_1294 0.28 +0.3 1,341,261 + B158DRAFT_1294 0.28 +0.1 1,341,269 - B158DRAFT_1294 0.29 -0.3 1,341,271 + B158DRAFT_1294 0.29 +0.4 1,341,271 + B158DRAFT_1294 0.29 -0.2 1,341,321 + B158DRAFT_1294 0.34 -0.1 1,341,322 - B158DRAFT_1294 0.34 +0.1 1,341,329 - B158DRAFT_1294 0.35 +0.5 1,341,346 + B158DRAFT_1294 0.36 +0.5 1,341,348 - B158DRAFT_1294 0.37 -0.5 1,341,402 + B158DRAFT_1294 0.42 +0.4 1,341,436 + B158DRAFT_1294 0.45 +0.3 1,341,436 + B158DRAFT_1294 0.45 +0.2 1,341,464 + B158DRAFT_1294 0.48 +1.1 1,341,518 + B158DRAFT_1294 0.53 -0.1 1,341,518 + B158DRAFT_1294 0.53 +0.3 1,341,518 + B158DRAFT_1294 0.53 +0.2 1,341,518 + B158DRAFT_1294 0.53 +0.9 1,341,518 + B158DRAFT_1294 0.53 +0.1 1,341,518 + B158DRAFT_1294 0.53 +0.3 1,341,518 + B158DRAFT_1294 0.53 -0.1 1,341,526 + B158DRAFT_1294 0.54 +0.0 1,341,526 - B158DRAFT_1294 0.54 +0.1 1,341,526 - B158DRAFT_1294 0.54 +0.4 1,341,526 - B158DRAFT_1294 0.54 -0.6 1,341,526 - B158DRAFT_1294 0.54 -0.0 1,341,526 - B158DRAFT_1294 0.54 +0.3 1,341,526 - B158DRAFT_1294 0.54 -0.4 1,341,526 - B158DRAFT_1294 0.54 +0.2 1,341,526 - B158DRAFT_1294 0.54 +0.3 1,341,526 - B158DRAFT_1294 0.54 -0.5 1,341,526 - B158DRAFT_1294 0.54 +0.2 1,341,607 + B158DRAFT_1294 0.62 +0.5 1,341,649 + B158DRAFT_1294 0.66 -0.0 1,341,697 + B158DRAFT_1294 0.71 -0.3 1,341,720 - B158DRAFT_1294 0.74 +0.4 1,341,790 - B158DRAFT_1294 0.80 +0.1 1,341,800 - B158DRAFT_1294 0.81 +0.2 1,341,810 + B158DRAFT_1294 0.82 +0.1 1,341,810 + B158DRAFT_1294 0.82 +0.1 1,341,824 - B158DRAFT_1294 0.84 +0.1 1,341,824 - B158DRAFT_1294 0.84 +1.0 1,341,841 + B158DRAFT_1294 0.86 +0.2 1,341,851 + B158DRAFT_1294 0.87 +0.3
Or see this region's nucleotide sequence