Experiment: m.b. 5-Hydroxymethylfurfural 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1121 and B158DRAFT_1122 are separated by 274 nucleotides B158DRAFT_1122 and B158DRAFT_1123 are separated by 320 nucleotides
B158DRAFT_1121: B158DRAFT_1121 - Putative hemolysin, at 1,159,120 to 1,160,817
_1121
B158DRAFT_1122: B158DRAFT_1122 - aspartyl-tRNA synthetase (EC 6.1.1.12), at 1,161,092 to 1,162,864
_1122
B158DRAFT_1123: B158DRAFT_1123 - DNA-binding regulatory protein, YebC/PmpR family, at 1,163,185 to 1,163,928
_1123
Position (kb)
1161
1162
1163 Strain fitness (log2 ratio)
-1
0
1 at 1160.182 kb on - strand, within B158DRAFT_1121 at 1160.410 kb on + strand, within B158DRAFT_1121 at 1160.418 kb on - strand, within B158DRAFT_1121 at 1160.457 kb on - strand, within B158DRAFT_1121 at 1160.467 kb on + strand, within B158DRAFT_1121 at 1160.467 kb on + strand, within B158DRAFT_1121 at 1160.467 kb on + strand, within B158DRAFT_1121 at 1160.546 kb on - strand, within B158DRAFT_1121 at 1160.546 kb on - strand, within B158DRAFT_1121 at 1160.552 kb on + strand, within B158DRAFT_1121 at 1160.587 kb on - strand, within B158DRAFT_1121 at 1160.621 kb on + strand, within B158DRAFT_1121 at 1160.626 kb on + strand, within B158DRAFT_1121 at 1160.627 kb on - strand, within B158DRAFT_1121 at 1160.629 kb on - strand, within B158DRAFT_1121 at 1160.650 kb on - strand at 1160.671 kb on + strand at 1160.677 kb on + strand at 1160.679 kb on - strand at 1160.679 kb on - strand at 1160.688 kb on + strand at 1160.696 kb on - strand at 1160.773 kb on - strand at 1160.773 kb on - strand at 1160.807 kb on - strand at 1160.827 kb on + strand at 1160.828 kb on - strand at 1160.859 kb on + strand at 1160.862 kb on + strand at 1160.919 kb on - strand at 1160.941 kb on + strand at 1160.949 kb on - strand at 1162.806 kb on + strand at 1162.856 kb on + strand at 1163.040 kb on - strand at 1163.040 kb on - strand at 1163.186 kb on - strand at 1163.427 kb on - strand, within B158DRAFT_1123 at 1163.442 kb on - strand, within B158DRAFT_1123 at 1163.456 kb on - strand, within B158DRAFT_1123 at 1163.550 kb on - strand, within B158DRAFT_1123 at 1163.748 kb on - strand, within B158DRAFT_1123 at 1163.801 kb on + strand, within B158DRAFT_1123
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 4 mM remove 1,160,182 - B158DRAFT_1121 0.63 -0.5 1,160,410 + B158DRAFT_1121 0.76 -0.1 1,160,418 - B158DRAFT_1121 0.76 -0.4 1,160,457 - B158DRAFT_1121 0.79 -0.2 1,160,467 + B158DRAFT_1121 0.79 -0.7 1,160,467 + B158DRAFT_1121 0.79 -0.2 1,160,467 + B158DRAFT_1121 0.79 -0.4 1,160,546 - B158DRAFT_1121 0.84 -0.3 1,160,546 - B158DRAFT_1121 0.84 -1.4 1,160,552 + B158DRAFT_1121 0.84 -0.3 1,160,587 - B158DRAFT_1121 0.86 -0.2 1,160,621 + B158DRAFT_1121 0.88 -0.4 1,160,626 + B158DRAFT_1121 0.89 -0.4 1,160,627 - B158DRAFT_1121 0.89 -0.7 1,160,629 - B158DRAFT_1121 0.89 -0.2 1,160,650 - +0.1 1,160,671 + +0.2 1,160,677 + +0.7 1,160,679 - -0.2 1,160,679 - -0.0 1,160,688 + -0.2 1,160,696 - -0.6 1,160,773 - -0.1 1,160,773 - +0.1 1,160,807 - -0.4 1,160,827 + +0.0 1,160,828 - +0.4 1,160,859 + -0.5 1,160,862 + -0.3 1,160,919 - -0.1 1,160,941 + +0.5 1,160,949 - -0.0 1,162,806 + -0.3 1,162,856 + -0.3 1,163,040 - -0.0 1,163,040 - +0.1 1,163,186 - -0.1 1,163,427 - B158DRAFT_1123 0.33 +0.2 1,163,442 - B158DRAFT_1123 0.35 -0.3 1,163,456 - B158DRAFT_1123 0.36 -0.7 1,163,550 - B158DRAFT_1123 0.49 -0.4 1,163,748 - B158DRAFT_1123 0.76 +0.1 1,163,801 + B158DRAFT_1123 0.83 +0.2
Or see this region's nucleotide sequence