Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0751

Experiment: m.b. 5-Hydroxymethylfurfural 4 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0750 and B158DRAFT_0751 are separated by 207 nucleotidesB158DRAFT_0751 and B158DRAFT_0752 are separated by 318 nucleotidesB158DRAFT_0752 and B158DRAFT_0753 are separated by 24 nucleotides B158DRAFT_0750: B158DRAFT_0750 - replication restart DNA helicase PriA, at 754,067 to 756,259 _0750 B158DRAFT_0751: B158DRAFT_0751 - hypothetical protein, at 756,467 to 756,778 _0751 B158DRAFT_0752: B158DRAFT_0752 - hypothetical protein, at 757,097 to 757,627 _0752 B158DRAFT_0753: B158DRAFT_0753 - hypothetical protein, at 757,652 to 758,290 _0753 Position (kb) 756 757Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 755.474 kb on + strand, within B158DRAFT_0750at 755.528 kb on + strand, within B158DRAFT_0750at 755.529 kb on + strand, within B158DRAFT_0750at 755.529 kb on + strand, within B158DRAFT_0750at 755.537 kb on - strand, within B158DRAFT_0750at 755.578 kb on + strand, within B158DRAFT_0750at 755.601 kb on + strand, within B158DRAFT_0750at 755.601 kb on + strand, within B158DRAFT_0750at 755.645 kb on + strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.824 kb on + strand, within B158DRAFT_0750at 755.830 kb on - strand, within B158DRAFT_0750at 755.878 kb on + strand, within B158DRAFT_0750at 755.901 kb on - strand, within B158DRAFT_0750at 755.918 kb on - strand, within B158DRAFT_0750at 755.920 kb on - strand, within B158DRAFT_0750at 755.925 kb on + strand, within B158DRAFT_0750at 755.939 kb on - strand, within B158DRAFT_0750at 756.136 kb on - strandat 756.136 kb on - strandat 756.174 kb on + strandat 756.174 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.256 kb on - strandat 756.305 kb on - strandat 756.404 kb on + strandat 756.412 kb on - strandat 756.448 kb on + strandat 756.502 kb on + strand, within B158DRAFT_0751at 756.531 kb on + strand, within B158DRAFT_0751at 756.533 kb on + strand, within B158DRAFT_0751at 756.541 kb on - strand, within B158DRAFT_0751at 756.573 kb on - strand, within B158DRAFT_0751at 756.580 kb on - strand, within B158DRAFT_0751at 756.731 kb on + strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.766 kb on + strandat 756.866 kb on + strandat 756.866 kb on + strandat 757.162 kb on + strand, within B158DRAFT_0752at 757.165 kb on - strand, within B158DRAFT_0752at 757.165 kb on - strand, within B158DRAFT_0752at 757.187 kb on + strand, within B158DRAFT_0752at 757.192 kb on + strand, within B158DRAFT_0752at 757.260 kb on - strand, within B158DRAFT_0752at 757.262 kb on - strand, within B158DRAFT_0752at 757.272 kb on - strand, within B158DRAFT_0752at 757.288 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.295 kb on + strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.303 kb on - strand, within B158DRAFT_0752at 757.311 kb on - strand, within B158DRAFT_0752at 757.322 kb on + strand, within B158DRAFT_0752at 757.337 kb on - strand, within B158DRAFT_0752at 757.382 kb on + strand, within B158DRAFT_0752at 757.386 kb on + strand, within B158DRAFT_0752at 757.394 kb on - strand, within B158DRAFT_0752at 757.409 kb on + strand, within B158DRAFT_0752at 757.414 kb on + strand, within B158DRAFT_0752at 757.416 kb on + strand, within B158DRAFT_0752at 757.416 kb on + strand, within B158DRAFT_0752at 757.424 kb on - strand, within B158DRAFT_0752at 757.613 kb on + strandat 757.646 kb on + strandat 757.646 kb on + strandat 757.654 kb on - strandat 757.654 kb on - strandat 757.700 kb on + strandat 757.715 kb on - strandat 757.724 kb on + strand, within B158DRAFT_0753at 757.724 kb on + strand, within B158DRAFT_0753at 757.732 kb on - strand, within B158DRAFT_0753at 757.744 kb on + strand, within B158DRAFT_0753at 757.744 kb on + strand, within B158DRAFT_0753at 757.749 kb on + strand, within B158DRAFT_0753at 757.759 kb on + strand, within B158DRAFT_0753at 757.759 kb on + strand, within B158DRAFT_0753

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 4 mM
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755,474 + B158DRAFT_0750 0.64 -2.5
755,528 + B158DRAFT_0750 0.67 -1.3
755,529 + B158DRAFT_0750 0.67 -0.1
755,529 + B158DRAFT_0750 0.67 -0.8
755,537 - B158DRAFT_0750 0.67 -2.1
755,578 + B158DRAFT_0750 0.69 -0.5
755,601 + B158DRAFT_0750 0.70 -1.5
755,601 + B158DRAFT_0750 0.70 -0.1
755,645 + B158DRAFT_0750 0.72 +0.2
755,663 - B158DRAFT_0750 0.73 -0.9
755,663 - B158DRAFT_0750 0.73 -2.5
755,663 - B158DRAFT_0750 0.73 -0.9
755,824 + B158DRAFT_0750 0.80 -3.5
755,830 - B158DRAFT_0750 0.80 +0.9
755,878 + B158DRAFT_0750 0.83 -0.7
755,901 - B158DRAFT_0750 0.84 -2.0
755,918 - B158DRAFT_0750 0.84 -1.4
755,920 - B158DRAFT_0750 0.84 -0.1
755,925 + B158DRAFT_0750 0.85 -1.1
755,939 - B158DRAFT_0750 0.85 -3.8
756,136 - -2.3
756,136 - -2.2
756,174 + -1.8
756,174 + -0.5
756,243 + -2.5
756,243 + -1.6
756,243 + -1.8
756,243 + -1.3
756,243 + -0.5
756,251 - +0.0
756,251 - -0.3
756,251 - -0.0
756,251 - -0.1
756,251 - +0.3
756,251 - -0.3
756,251 - +0.3
756,256 - -1.9
756,305 - +0.0
756,404 + -0.1
756,412 - -0.3
756,448 + +0.2
756,502 + B158DRAFT_0751 0.11 -0.3
756,531 + B158DRAFT_0751 0.21 +0.3
756,533 + B158DRAFT_0751 0.21 -0.0
756,541 - B158DRAFT_0751 0.24 +0.4
756,573 - B158DRAFT_0751 0.34 -0.3
756,580 - B158DRAFT_0751 0.36 +0.0
756,731 + B158DRAFT_0751 0.85 -0.2
756,739 - B158DRAFT_0751 0.87 +0.6
756,739 - B158DRAFT_0751 0.87 +0.3
756,739 - B158DRAFT_0751 0.87 -0.1
756,766 + -0.5
756,866 + +0.2
756,866 + -0.8
757,162 + B158DRAFT_0752 0.12 -0.4
757,165 - B158DRAFT_0752 0.13 -0.0
757,165 - B158DRAFT_0752 0.13 +0.1
757,187 + B158DRAFT_0752 0.17 -0.4
757,192 + B158DRAFT_0752 0.18 +0.9
757,260 - B158DRAFT_0752 0.31 -0.2
757,262 - B158DRAFT_0752 0.31 -0.2
757,272 - B158DRAFT_0752 0.33 -0.2
757,288 + B158DRAFT_0752 0.36 -0.0
757,295 + B158DRAFT_0752 0.37 -0.1
757,295 + B158DRAFT_0752 0.37 -0.2
757,295 + B158DRAFT_0752 0.37 -0.1
757,295 + B158DRAFT_0752 0.37 -0.1
757,295 + B158DRAFT_0752 0.37 +0.2
757,295 + B158DRAFT_0752 0.37 +0.3
757,303 - B158DRAFT_0752 0.39 +0.0
757,303 - B158DRAFT_0752 0.39 -0.2
757,303 - B158DRAFT_0752 0.39 -0.6
757,303 - B158DRAFT_0752 0.39 -0.6
757,303 - B158DRAFT_0752 0.39 -0.4
757,303 - B158DRAFT_0752 0.39 +0.3
757,311 - B158DRAFT_0752 0.40 +0.1
757,322 + B158DRAFT_0752 0.42 -0.1
757,337 - B158DRAFT_0752 0.45 -0.5
757,382 + B158DRAFT_0752 0.54 +0.2
757,386 + B158DRAFT_0752 0.54 -0.2
757,394 - B158DRAFT_0752 0.56 -0.5
757,409 + B158DRAFT_0752 0.59 +0.4
757,414 + B158DRAFT_0752 0.60 +0.4
757,416 + B158DRAFT_0752 0.60 -0.1
757,416 + B158DRAFT_0752 0.60 +0.0
757,424 - B158DRAFT_0752 0.62 -0.5
757,613 + -0.4
757,646 + -0.1
757,646 + -0.1
757,654 - +0.9
757,654 - -0.8
757,700 + -0.1
757,715 - -0.4
757,724 + B158DRAFT_0753 0.11 +0.2
757,724 + B158DRAFT_0753 0.11 +0.0
757,732 - B158DRAFT_0753 0.13 -0.4
757,744 + B158DRAFT_0753 0.14 -0.0
757,744 + B158DRAFT_0753 0.14 -0.5
757,749 + B158DRAFT_0753 0.15 -0.3
757,759 + B158DRAFT_0753 0.17 -0.0
757,759 + B158DRAFT_0753 0.17 -0.1

Or see this region's nucleotide sequence