Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6135 and Atu6136 are separated by 51 nucleotides Atu6136 and Atu6137 are separated by 13 nucleotides Atu6137 and Atu6138 are separated by 231 nucleotides
Atu6135: Atu6135 - Sucrose phosphorylase-like protein, at 153,761 to 155,218
Atu6135
Atu6136: Atu6136 - Na+/phosphate symporter, at 155,270 to 156,922
Atu6136
Atu6137: Atu6137 - hypothetical protein, at 156,936 to 157,232
Atu6137
Atu6138: Atu6138 - Repressor of the acc and arc operons, at 157,464 to 158,240
Atu6138
Position (kb) 155
156
157 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 154.330 kb on + strand, within Atu6135 at 154.336 kb on + strand, within Atu6135 at 154.346 kb on + strand, within Atu6135 at 154.419 kb on + strand, within Atu6135 at 154.427 kb on - strand, within Atu6135 at 154.427 kb on - strand, within Atu6135 at 154.442 kb on - strand, within Atu6135 at 154.455 kb on - strand, within Atu6135 at 154.458 kb on + strand, within Atu6135 at 154.460 kb on + strand, within Atu6135 at 154.460 kb on + strand, within Atu6135 at 154.468 kb on - strand, within Atu6135 at 154.526 kb on - strand, within Atu6135 at 154.552 kb on - strand, within Atu6135 at 154.708 kb on - strand, within Atu6135 at 154.718 kb on + strand, within Atu6135 at 154.726 kb on - strand, within Atu6135 at 154.738 kb on + strand, within Atu6135 at 154.746 kb on - strand, within Atu6135 at 154.746 kb on - strand, within Atu6135 at 154.802 kb on + strand, within Atu6135 at 154.838 kb on + strand, within Atu6135 at 154.846 kb on - strand, within Atu6135 at 154.989 kb on + strand, within Atu6135 at 155.050 kb on - strand, within Atu6135 at 155.102 kb on + strand at 155.117 kb on + strand at 155.169 kb on + strand at 155.246 kb on - strand at 155.275 kb on + strand at 155.283 kb on - strand at 155.283 kb on - strand at 155.343 kb on + strand at 155.385 kb on + strand at 155.413 kb on - strand at 155.440 kb on - strand, within Atu6136 at 155.462 kb on + strand, within Atu6136 at 155.480 kb on + strand, within Atu6136 at 155.557 kb on + strand, within Atu6136 at 155.598 kb on - strand, within Atu6136 at 155.623 kb on - strand, within Atu6136 at 155.738 kb on + strand, within Atu6136 at 155.743 kb on + strand, within Atu6136 at 155.751 kb on - strand, within Atu6136 at 155.751 kb on - strand, within Atu6136 at 155.772 kb on + strand, within Atu6136 at 155.772 kb on + strand, within Atu6136 at 155.813 kb on - strand, within Atu6136 at 155.815 kb on + strand, within Atu6136 at 155.927 kb on - strand, within Atu6136 at 155.929 kb on + strand, within Atu6136 at 155.929 kb on + strand, within Atu6136 at 155.948 kb on - strand, within Atu6136 at 155.978 kb on + strand, within Atu6136 at 155.986 kb on - strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 156.000 kb on + strand, within Atu6136 at 156.008 kb on - strand, within Atu6136 at 156.012 kb on + strand, within Atu6136 at 156.012 kb on + strand, within Atu6136 at 156.018 kb on - strand, within Atu6136 at 156.018 kb on - strand, within Atu6136 at 156.020 kb on - strand, within Atu6136 at 156.030 kb on - strand, within Atu6136 at 156.030 kb on - strand, within Atu6136 at 156.055 kb on - strand, within Atu6136 at 156.055 kb on - strand, within Atu6136 at 156.158 kb on + strand, within Atu6136 at 156.158 kb on + strand, within Atu6136 at 156.198 kb on + strand, within Atu6136 at 156.202 kb on - strand, within Atu6136 at 156.206 kb on - strand, within Atu6136 at 156.320 kb on + strand, within Atu6136 at 156.352 kb on + strand, within Atu6136 at 156.361 kb on - strand, within Atu6136 at 156.481 kb on + strand, within Atu6136 at 156.481 kb on + strand, within Atu6136 at 156.489 kb on - strand, within Atu6136 at 156.489 kb on - strand, within Atu6136 at 156.491 kb on - strand, within Atu6136 at 156.512 kb on + strand, within Atu6136 at 156.535 kb on + strand, within Atu6136 at 156.535 kb on + strand, within Atu6136 at 156.543 kb on - strand, within Atu6136 at 156.578 kb on + strand, within Atu6136 at 156.578 kb on + strand, within Atu6136 at 156.586 kb on - strand, within Atu6136 at 156.591 kb on - strand, within Atu6136 at 156.592 kb on - strand, within Atu6136 at 156.597 kb on - strand, within Atu6136 at 156.603 kb on - strand, within Atu6136 at 156.688 kb on + strand, within Atu6136 at 156.691 kb on - strand, within Atu6136 at 156.705 kb on - strand, within Atu6136 at 156.727 kb on + strand, within Atu6136 at 156.761 kb on + strand at 156.800 kb on + strand at 156.840 kb on + strand at 156.846 kb on + strand at 156.875 kb on - strand at 156.949 kb on + strand at 156.955 kb on + strand at 156.993 kb on + strand, within Atu6137 at 156.997 kb on + strand, within Atu6137 at 157.005 kb on - strand, within Atu6137 at 157.007 kb on + strand, within Atu6137 at 157.007 kb on + strand, within Atu6137 at 157.015 kb on - strand, within Atu6137 at 157.041 kb on + strand, within Atu6137 at 157.041 kb on + strand, within Atu6137 at 157.047 kb on + strand, within Atu6137 at 157.093 kb on + strand, within Atu6137 at 157.093 kb on + strand, within Atu6137 at 157.096 kb on - strand, within Atu6137 at 157.098 kb on + strand, within Atu6137 at 157.176 kb on + strand, within Atu6137 at 157.181 kb on + strand, within Atu6137 at 157.181 kb on + strand, within Atu6137 at 157.181 kb on + strand, within Atu6137 at 157.189 kb on - strand, within Atu6137 at 157.197 kb on + strand, within Atu6137 at 157.475 kb on - strand at 157.482 kb on - strand at 157.487 kb on - strand at 157.614 kb on + strand, within Atu6138 at 157.655 kb on + strand, within Atu6138 at 157.655 kb on + strand, within Atu6138 at 157.669 kb on + strand, within Atu6138 at 157.672 kb on - strand, within Atu6138 at 157.672 kb on - strand, within Atu6138 at 157.826 kb on - strand, within Atu6138 at 157.839 kb on + strand, within Atu6138 at 157.848 kb on - strand, within Atu6138 at 157.897 kb on + strand, within Atu6138 at 157.909 kb on - strand, within Atu6138 at 157.917 kb on + strand, within Atu6138
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 154,330 + Atu6135 0.39 +1.4 154,336 + Atu6135 0.39 -0.1 154,346 + Atu6135 0.40 -1.1 154,419 + Atu6135 0.45 +1.2 154,427 - Atu6135 0.46 +0.6 154,427 - Atu6135 0.46 +2.0 154,442 - Atu6135 0.47 -0.4 154,455 - Atu6135 0.48 +1.1 154,458 + Atu6135 0.48 -1.2 154,460 + Atu6135 0.48 +2.1 154,460 + Atu6135 0.48 -0.0 154,468 - Atu6135 0.48 +0.3 154,526 - Atu6135 0.52 +0.8 154,552 - Atu6135 0.54 +0.1 154,708 - Atu6135 0.65 +1.5 154,718 + Atu6135 0.66 +0.4 154,726 - Atu6135 0.66 -1.0 154,738 + Atu6135 0.67 +0.6 154,746 - Atu6135 0.68 -1.4 154,746 - Atu6135 0.68 +0.7 154,802 + Atu6135 0.71 -0.2 154,838 + Atu6135 0.74 +2.5 154,846 - Atu6135 0.74 -0.5 154,989 + Atu6135 0.84 +2.1 155,050 - Atu6135 0.88 -0.2 155,102 + +1.2 155,117 + +0.2 155,169 + +0.2 155,246 - +2.2 155,275 + +2.5 155,283 - +2.1 155,283 - +0.1 155,343 + +0.4 155,385 + +0.2 155,413 - +0.6 155,440 - Atu6136 0.10 +0.2 155,462 + Atu6136 0.12 +0.1 155,480 + Atu6136 0.13 +0.0 155,557 + Atu6136 0.17 +1.4 155,598 - Atu6136 0.20 +0.3 155,623 - Atu6136 0.21 +0.6 155,738 + Atu6136 0.28 +0.1 155,743 + Atu6136 0.29 +0.7 155,751 - Atu6136 0.29 +0.9 155,751 - Atu6136 0.29 +0.4 155,772 + Atu6136 0.30 +1.0 155,772 + Atu6136 0.30 +0.1 155,813 - Atu6136 0.33 -1.2 155,815 + Atu6136 0.33 +0.8 155,927 - Atu6136 0.40 +2.5 155,929 + Atu6136 0.40 -0.6 155,929 + Atu6136 0.40 +0.3 155,948 - Atu6136 0.41 +0.9 155,978 + Atu6136 0.43 +3.5 155,986 - Atu6136 0.43 +0.8 155,989 + Atu6136 0.43 +0.0 155,989 + Atu6136 0.43 +1.3 155,989 + Atu6136 0.43 +0.7 156,000 + Atu6136 0.44 -0.3 156,008 - Atu6136 0.45 -0.7 156,012 + Atu6136 0.45 +0.8 156,012 + Atu6136 0.45 +0.6 156,018 - Atu6136 0.45 +0.6 156,018 - Atu6136 0.45 +0.8 156,020 - Atu6136 0.45 -0.2 156,030 - Atu6136 0.46 -0.1 156,030 - Atu6136 0.46 +0.7 156,055 - Atu6136 0.47 -0.3 156,055 - Atu6136 0.47 +0.2 156,158 + Atu6136 0.54 +0.0 156,158 + Atu6136 0.54 +1.3 156,198 + Atu6136 0.56 +1.3 156,202 - Atu6136 0.56 +0.0 156,206 - Atu6136 0.57 +0.3 156,320 + Atu6136 0.64 +1.3 156,352 + Atu6136 0.65 +1.8 156,361 - Atu6136 0.66 +1.1 156,481 + Atu6136 0.73 +0.7 156,481 + Atu6136 0.73 +0.3 156,489 - Atu6136 0.74 +0.8 156,489 - Atu6136 0.74 +0.0 156,491 - Atu6136 0.74 +0.2 156,512 + Atu6136 0.75 +0.7 156,535 + Atu6136 0.77 +4.5 156,535 + Atu6136 0.77 +0.1 156,543 - Atu6136 0.77 +0.3 156,578 + Atu6136 0.79 +0.4 156,578 + Atu6136 0.79 +1.1 156,586 - Atu6136 0.80 +0.6 156,591 - Atu6136 0.80 +0.5 156,592 - Atu6136 0.80 +2.9 156,597 - Atu6136 0.80 +1.3 156,603 - Atu6136 0.81 +2.1 156,688 + Atu6136 0.86 -0.6 156,691 - Atu6136 0.86 +1.6 156,705 - Atu6136 0.87 +1.2 156,727 + Atu6136 0.88 -0.8 156,761 + +2.9 156,800 + -0.3 156,840 + +2.3 156,846 + +0.0 156,875 - +1.7 156,949 + +0.2 156,955 + +1.0 156,993 + Atu6137 0.19 -0.2 156,997 + Atu6137 0.21 -0.3 157,005 - Atu6137 0.23 +0.2 157,007 + Atu6137 0.24 +1.9 157,007 + Atu6137 0.24 -1.0 157,015 - Atu6137 0.27 +1.1 157,041 + Atu6137 0.35 +0.4 157,041 + Atu6137 0.35 +1.6 157,047 + Atu6137 0.37 +0.3 157,093 + Atu6137 0.53 +2.1 157,093 + Atu6137 0.53 -0.8 157,096 - Atu6137 0.54 +1.7 157,098 + Atu6137 0.55 -0.2 157,176 + Atu6137 0.81 +0.5 157,181 + Atu6137 0.82 +1.0 157,181 + Atu6137 0.82 +1.2 157,181 + Atu6137 0.82 +2.0 157,189 - Atu6137 0.85 +1.2 157,197 + Atu6137 0.88 -0.1 157,475 - +0.6 157,482 - +1.6 157,487 - +3.0 157,614 + Atu6138 0.19 +1.6 157,655 + Atu6138 0.25 +1.1 157,655 + Atu6138 0.25 +2.2 157,669 + Atu6138 0.26 +1.0 157,672 - Atu6138 0.27 +2.9 157,672 - Atu6138 0.27 +1.3 157,826 - Atu6138 0.47 +2.9 157,839 + Atu6138 0.48 +2.0 157,848 - Atu6138 0.49 +3.9 157,897 + Atu6138 0.56 +2.1 157,909 - Atu6138 0.57 +1.6 157,917 + Atu6138 0.58 +3.6
Or see this region's nucleotide sequence