Experiment: Cephalothin 3 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_794 and PfGW456L13_795 are separated by 24 nucleotides PfGW456L13_795 and PfGW456L13_796 are separated by 101 nucleotides PfGW456L13_796 and PfGW456L13_797 are separated by 5 nucleotides
PfGW456L13_794 - Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2), at 894,959 to 896,356
_794
PfGW456L13_795 - hypothetical protein, at 896,381 to 896,500
_795
PfGW456L13_796 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 896,602 to 897,057
_796
PfGW456L13_797 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 897,063 to 898,271
_797
Position (kb) 896
897 Strain fitness (log2 ratio) -2
-1
0
1 at 895.461 kb on + strand, within PfGW456L13_794 at 895.461 kb on + strand at 895.461 kb on + strand, within PfGW456L13_794 at 895.461 kb on + strand, within PfGW456L13_794 at 895.462 kb on - strand, within PfGW456L13_794 at 895.875 kb on + strand, within PfGW456L13_794 at 896.010 kb on + strand, within PfGW456L13_794 at 896.010 kb on + strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.063 kb on + strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.431 kb on + strand, within PfGW456L13_795 at 896.432 kb on - strand, within PfGW456L13_795 at 896.527 kb on + strand at 896.527 kb on + strand at 896.527 kb on + strand at 896.528 kb on - strand at 897.065 kb on - strand at 897.065 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 3 mg/ml remove 895,461 + PfGW456L13_794 0.36 -0.2 895,461 + +0.2 895,461 + PfGW456L13_794 0.36 +0.6 895,461 + PfGW456L13_794 0.36 -0.4 895,462 - PfGW456L13_794 0.36 +0.3 895,875 + PfGW456L13_794 0.66 +0.2 896,010 + PfGW456L13_794 0.75 -0.5 896,010 + PfGW456L13_794 0.75 +0.1 896,011 - PfGW456L13_794 0.75 +0.8 896,011 - PfGW456L13_794 0.75 -0.6 896,011 - PfGW456L13_794 0.75 -0.6 896,011 - PfGW456L13_794 0.75 -0.7 896,063 + PfGW456L13_794 0.79 -1.0 896,064 - PfGW456L13_794 0.79 -0.4 896,064 - PfGW456L13_794 0.79 +0.2 896,064 - PfGW456L13_794 0.79 -0.8 896,076 + PfGW456L13_794 0.80 -0.5 896,076 + PfGW456L13_794 0.80 +1.2 896,077 - PfGW456L13_794 0.80 -1.8 896,077 - PfGW456L13_794 0.80 +0.8 896,077 - PfGW456L13_794 0.80 -0.4 896,077 - PfGW456L13_794 0.80 -0.8 896,077 - PfGW456L13_794 0.80 -0.7 896,079 + PfGW456L13_794 0.80 +0.8 896,079 + PfGW456L13_794 0.80 +0.4 896,080 - PfGW456L13_794 0.80 -0.7 896,080 - PfGW456L13_794 0.80 -0.9 896,080 - PfGW456L13_794 0.80 +1.5 896,080 - PfGW456L13_794 0.80 +0.5 896,431 + PfGW456L13_795 0.42 -2.2 896,432 - PfGW456L13_795 0.42 -0.6 896,527 + +0.7 896,527 + +0.6 896,527 + +0.2 896,528 - +0.5 897,065 - +0.9 897,065 - -1.0
Or see this region's nucleotide sequence