Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4447

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
4,969,344	+				+0.2
4,969,501	+				+2.0
4,969,502	-				-0.3
4,969,542	-				-1.0
4,969,542	-				+0.7
4,969,694	-		PfGW456L13_4446	0.29	+1.2
4,969,694	-		PfGW456L13_4446	0.29	+0.6
4,969,756	+		PfGW456L13_4446	0.37	+0.4
4,969,756	+		PfGW456L13_4446	0.37	-1.6
4,969,756	+		PfGW456L13_4446	0.37	-1.9
4,969,757	-		PfGW456L13_4446	0.37	+0.6
4,969,757	-		PfGW456L13_4446	0.37	-0.0
4,969,757	-		PfGW456L13_4446	0.37	-0.9
4,969,757	-		PfGW456L13_4446	0.37	+0.0
4,969,757	-		PfGW456L13_4446	0.37	-1.7
4,969,757	-		PfGW456L13_4446	0.37	+0.4
4,969,757	-		PfGW456L13_4446	0.37	+0.2
4,969,767	+		PfGW456L13_4446	0.39	-0.5
4,969,767	+		PfGW456L13_4446	0.39	-0.3
4,969,768	-		PfGW456L13_4446	0.39	-0.1
4,969,768	-		PfGW456L13_4446	0.39	+0.3
4,969,816	+		PfGW456L13_4446	0.46	+1.5
4,969,823	-		PfGW456L13_4446	0.47	+2.7
4,969,823	-		PfGW456L13_4446	0.47	+0.1
4,969,987	+		PfGW456L13_4446	0.69	-0.6
4,969,987	+		PfGW456L13_4446	0.69	-0.1
4,969,987	+		PfGW456L13_4446	0.69	+0.9
4,969,987	+		PfGW456L13_4446	0.69	-0.5
4,969,987	+		PfGW456L13_4446	0.69	-0.2
4,969,987	+		PfGW456L13_4446	0.69	-0.4
4,969,987	+		PfGW456L13_4446	0.69	-0.3
4,969,988	-		PfGW456L13_4446	0.69	+0.2
4,969,988	-		PfGW456L13_4446	0.69	-1.1
4,969,988	-		PfGW456L13_4446	0.69	-0.5
4,969,988	-		PfGW456L13_4446	0.69	+0.6
4,970,008	-		PfGW456L13_4446	0.72	-0.5
4,970,033	-		PfGW456L13_4446	0.76	-0.3
4,970,033	-		PfGW456L13_4446	0.76	+1.5
4,970,036	+		PfGW456L13_4446	0.76	+0.3
4,970,036	+		PfGW456L13_4446	0.76	+0.2
4,970,036	+		PfGW456L13_4446	0.76	+0.1
4,970,036	+		PfGW456L13_4446	0.76	-0.6
4,970,036	+		PfGW456L13_4446	0.76	+0.6
4,970,036	+		PfGW456L13_4446	0.76	+0.2
4,970,036	+		PfGW456L13_4446	0.76	+0.9
4,970,036	+		PfGW456L13_4446	0.76	+2.2
4,970,037	-		PfGW456L13_4446	0.76	+0.1
4,970,037	-		PfGW456L13_4446	0.76	-0.2
4,970,037	-		PfGW456L13_4446	0.76	+0.3
4,970,037	-		PfGW456L13_4446	0.76	-0.2
4,970,037	-		PfGW456L13_4446	0.76	-1.3
4,970,037	-		PfGW456L13_4446	0.76	-0.6
4,970,037	-		PfGW456L13_4446	0.76	+0.8
4,970,046	+		PfGW456L13_4446	0.77	-0.2
4,970,104	+		PfGW456L13_4446	0.85	-0.3
4,970,105	-		PfGW456L13_4446	0.86	-1.0
4,970,143	+				-1.1
4,970,143	+				-0.3
4,970,144	-				+0.8
4,970,203	+				+0.0
4,970,203	+				-1.3
4,970,204	-				+1.5
4,970,204	-				+2.5
4,970,306	+				+0.7
4,970,306	+				+0.4
4,970,307	-				+0.0
4,970,368	-				-0.5
4,970,499	+		PfGW456L13_4447	0.24	-1.1
4,970,718	+		PfGW456L13_4447	0.50	+0.2
4,970,719	-		PfGW456L13_4447	0.50	-0.9
4,970,719	-		PfGW456L13_4447	0.50	-1.1
4,970,719	-		PfGW456L13_4447	0.50	-0.5
4,970,719	-		PfGW456L13_4447	0.50	-1.1
4,970,991	+		PfGW456L13_4447	0.81	-0.4
4,971,005	+		PfGW456L13_4447	0.83	-0.7
4,971,005	+		PfGW456L13_4447	0.83	-0.5
4,971,006	-		PfGW456L13_4447	0.83	-0.8
4,971,175	+				-0.6
4,971,175	+				+0.5
4,971,175	+				-0.2
4,971,175	+				+1.0
4,971,176	-				-2.4
4,971,176	-				-1.9
4,971,176	-				+1.3
4,971,220	+				+1.2
4,971,220	+				-0.6
4,971,221	-				+0.7
4,971,302	+				+0.7
4,971,379	+		PfGW456L13_4448	0.26	-0.3
4,971,379	+		PfGW456L13_4448	0.26	-0.2
4,971,380	-		PfGW456L13_4448	0.26	-0.0
4,971,380	-		PfGW456L13_4448	0.26	+0.2
4,971,429	+		PfGW456L13_4448	0.38	+0.6
4,971,429	+		PfGW456L13_4448	0.38	-0.1
4,971,429	+		PfGW456L13_4448	0.38	-0.0
4,971,429	+		PfGW456L13_4448	0.38	+0.3
4,971,429	+		PfGW456L13_4448	0.38	-2.7
4,971,429	+		PfGW456L13_4448	0.38	-0.0
4,971,430	-		PfGW456L13_4448	0.39	-0.8
4,971,430	-		PfGW456L13_4448	0.39	+0.5
4,971,430	-		PfGW456L13_4448	0.39	-0.5
4,971,430	-		PfGW456L13_4448	0.39	-0.4
4,971,430	-		PfGW456L13_4448	0.39	+0.8
4,971,430	-		PfGW456L13_4448	0.39	+0.7
4,971,430	-		PfGW456L13_4448	0.39	+0.2
4,971,473	-		PfGW456L13_4448	0.50	+1.1
4,971,474	+		PfGW456L13_4448	0.50	-0.2
4,971,474	+		PfGW456L13_4448	0.50	-3.6
4,971,474	+		PfGW456L13_4448	0.50	-1.5
4,971,474	+		PfGW456L13_4448	0.50	+0.2
4,971,474	+		PfGW456L13_4448	0.50	-0.3
4,971,474	+		PfGW456L13_4448	0.50	-0.0
4,971,474	+		PfGW456L13_4448	0.50	-0.1
4,971,475	-		PfGW456L13_4448	0.50	+0.6
4,971,475	-		PfGW456L13_4448	0.50	+0.0
4,971,475	-		PfGW456L13_4448	0.50	-3.1
4,971,491	+		PfGW456L13_4448	0.54	+0.7
4,971,492	-		PfGW456L13_4448	0.54	+0.5
4,971,501	+		PfGW456L13_4448	0.57	+0.2
4,971,660	+				+1.9
4,971,660	+				-1.1
4,971,660	+				-0.3
4,971,660	+				-0.9
4,971,660	+				-0.5
4,971,661	-				-1.4
4,971,661	-				+0.0
4,971,661	-				-0.1
4,971,661	-				-0.3
4,971,661	-				+0.3
4,971,661	-				+0.2
4,971,661	-				-0.4
4,971,661	-				+0.0
4,971,727	-				-2.0
4,971,820	+				+0.2
4,971,820	+				-0.7
4,971,820	+				-0.5
4,971,821	-				+0.8
4,971,821	-				-1.2
4,971,829	+				-1.3
4,971,829	+				-0.6
4,971,829	+				+0.4
4,971,829	+				-0.3
4,971,830	-				+1.3
4,971,830	-				-0.7
4,971,830	-				-1.2
4,971,830	-				-0.2
4,971,830	-				+0.3
4,971,830	-				-1.4
4,971,830	-				-1.1
4,971,830	-				+0.0
4,972,015	+		PfGW456L13_4449	0.20	+0.7
4,972,015	+		PfGW456L13_4449	0.20	+0.2
4,972,015	+		PfGW456L13_4449	0.20	-0.0
4,972,015	+		PfGW456L13_4449	0.20	+0.7
4,972,016	-		PfGW456L13_4449	0.21	-0.2
4,972,016	-		PfGW456L13_4449	0.21	+0.0
4,972,087	+		PfGW456L13_4449	0.30	-1.1
4,972,087	+		PfGW456L13_4449	0.30	+0.1
4,972,087	+		PfGW456L13_4449	0.30	-0.3
4,972,088	-		PfGW456L13_4449	0.30	-1.0
4,972,088	-		PfGW456L13_4449	0.30	+0.7
4,972,088	-		PfGW456L13_4449	0.30	-0.5
4,972,088	-		PfGW456L13_4449	0.30	-0.0
4,972,088	-		PfGW456L13_4449	0.30	+0.2
4,972,138	+		PfGW456L13_4449	0.37	-0.7