Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4403

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
4,918,109	+				+0.7
4,918,110	-				-1.4
4,918,719	-		PfGW456L13_4402	0.61	+1.4
4,918,719	-		PfGW456L13_4402	0.61	+0.2
4,918,819	+		PfGW456L13_4402	0.72	-0.1
4,918,820	-		PfGW456L13_4402	0.72	+0.9
4,919,517	+		PfGW456L13_4403	0.50	+0.1
4,919,517	+		PfGW456L13_4403	0.50	-1.1
4,919,682	+		PfGW456L13_4403	0.70	+0.8
4,919,683	-		PfGW456L13_4403	0.71	-0.5
4,919,683	-		PfGW456L13_4403	0.71	+0.0
4,919,691	+		PfGW456L13_4403	0.72	+0.1
4,919,691	+		PfGW456L13_4403	0.72	+1.8
4,919,691	+		PfGW456L13_4403	0.72	+0.3
4,919,754	+		PfGW456L13_4403	0.79	-0.9
4,919,755	-		PfGW456L13_4403	0.79	+0.2
4,919,820	+		PfGW456L13_4403	0.87	+0.0
4,919,820	+		PfGW456L13_4403	0.87	-0.7
4,919,820	+		PfGW456L13_4403	0.87	+0.6
4,919,820	+		PfGW456L13_4403	0.87	-0.1
4,919,820	+		PfGW456L13_4403	0.87	+0.7
4,919,820	+		PfGW456L13_4403	0.87	-0.1
4,919,820	+		PfGW456L13_4403	0.87	+0.6
4,919,820	+		PfGW456L13_4403	0.87	+0.1
4,919,820	+		PfGW456L13_4403	0.87	-0.4
4,919,820	+		PfGW456L13_4403	0.87	+0.9
4,919,820	+		PfGW456L13_4403	0.87	+0.2
4,919,820	+		PfGW456L13_4403	0.87	-0.2
4,919,820	+		PfGW456L13_4403	0.87	+0.9
4,919,820	+		PfGW456L13_4403	0.87	+0.2
4,919,821	-		PfGW456L13_4403	0.87	+0.7
4,919,821	-		PfGW456L13_4403	0.87	+1.9
4,919,821	-		PfGW456L13_4403	0.87	-0.1
4,919,821	-		PfGW456L13_4403	0.87	+0.4
4,919,821	-		PfGW456L13_4403	0.87	+0.7
4,919,821	-		PfGW456L13_4403	0.87	+0.0
4,919,821	-		PfGW456L13_4403	0.87	-0.2
4,919,821	-		PfGW456L13_4403	0.87	+0.4
4,919,821	-		PfGW456L13_4403	0.87	+0.7
4,919,821	-		PfGW456L13_4403	0.87	-2.1
4,919,821	-		PfGW456L13_4403	0.87	+0.2
4,919,821	-		PfGW456L13_4403	0.87	+0.1
4,919,821	-		PfGW456L13_4403	0.87	-0.4
4,919,821	-		PfGW456L13_4403	0.87	+0.5
4,919,821	-		PfGW456L13_4403	0.87	-0.3
4,919,821	-		PfGW456L13_4403	0.87	-0.4
4,919,821	-		PfGW456L13_4403	0.87	+0.6
4,919,856	+				+0.2
4,919,856	+				-0.5
4,919,856	+				+0.3
4,919,857	-				+0.7
4,919,857	-				+1.2
4,919,857	-				+0.3
4,919,857	-				+0.0
4,919,912	+				+0.1
4,919,912	+				-1.2
4,919,912	+				+0.1
4,919,913	-				+0.0
4,919,925	+				-0.4
4,919,925	+				-1.2
4,919,925	+				-1.0
4,919,925	+				+1.5
4,919,925	+				+1.3
4,919,925	+				+0.7
4,919,925	+				-1.3
4,919,925	+				-2.5
4,919,925	+				+0.1
4,919,926	-				-0.2
4,920,125	+		PfGW456L13_4404	0.32	+0.2
4,920,262	+		PfGW456L13_4404	0.54	-0.3
4,920,262	+		PfGW456L13_4404	0.54	+0.3
4,920,262	+		PfGW456L13_4404	0.54	+1.2
4,920,262	+		PfGW456L13_4404	0.54	+0.5
4,920,262	+		PfGW456L13_4404	0.54	-0.9
4,920,262	+		PfGW456L13_4404	0.54	+0.4
4,920,263	-		PfGW456L13_4404	0.54	-1.1
4,920,263	-				-0.1
4,920,263	-		PfGW456L13_4404	0.54	-0.1
4,920,263	-		PfGW456L13_4404	0.54	-0.8
4,920,263	-		PfGW456L13_4404	0.54	-0.2
4,920,265	-		PfGW456L13_4404	0.54	+0.7
4,920,265	-		PfGW456L13_4404	0.54	+0.6
4,920,265	-		PfGW456L13_4404	0.54	-0.8
4,920,265	-		PfGW456L13_4404	0.54	+0.4
4,920,410	+		PfGW456L13_4404	0.77	-1.5
4,920,411	-		PfGW456L13_4404	0.77	+0.5
4,920,434	+		PfGW456L13_4404	0.81	+1.9
4,920,434	+		PfGW456L13_4404	0.81	-0.4
4,920,434	+		PfGW456L13_4404	0.81	+0.6
4,920,434	+		PfGW456L13_4404	0.81	-1.0
4,920,434	+		PfGW456L13_4404	0.81	+0.5
4,920,434	+		PfGW456L13_4404	0.81	+3.2
4,920,434	+		PfGW456L13_4404	0.81	+1.9
4,920,434	+		PfGW456L13_4404	0.81	-0.2
4,920,434	+		PfGW456L13_4404	0.81	-0.4
4,920,435	-		PfGW456L13_4404	0.81	-0.3
4,920,435	-		PfGW456L13_4404	0.81	-1.0
4,920,435	-		PfGW456L13_4404	0.81	+0.6
4,920,441	+		PfGW456L13_4404	0.82	+1.4
4,920,441	+		PfGW456L13_4404	0.82	+0.2
4,920,441	+		PfGW456L13_4404	0.82	-1.9
4,920,442	-		PfGW456L13_4404	0.82	+1.5
4,920,459	+		PfGW456L13_4404	0.85	-0.2
4,920,560	+				-0.0
4,920,560	+				-0.3
4,920,561	-				-0.1
4,920,581	+				-0.4
4,920,581	+				-1.2
4,920,581	+				-1.4
4,920,581	+				-0.1
4,920,582	-				-2.1
4,920,582	-				+1.9
4,920,609	+				+0.8
4,920,755	-		PfGW456L13_4405	0.22	+0.4
4,920,794	+		PfGW456L13_4405	0.26	+0.6
4,920,794	+		PfGW456L13_4405	0.26	-0.2
4,920,794	+		PfGW456L13_4405	0.26	-0.7
4,920,795	-		PfGW456L13_4405	0.26	-0.1
4,920,795	-		PfGW456L13_4405	0.26	+0.2
4,920,795	-		PfGW456L13_4405	0.26	-0.2
4,920,795	-		PfGW456L13_4405	0.26	-0.8
4,920,796	+		PfGW456L13_4405	0.27	-0.3
4,920,797	-		PfGW456L13_4405	0.27	-0.1
4,920,797	-		PfGW456L13_4405	0.27	-1.1
4,920,797	-		PfGW456L13_4405	0.27	+0.4
4,920,797	-		PfGW456L13_4405	0.27	+0.5
4,920,797	-		PfGW456L13_4405	0.27	-0.8
4,920,797	-		PfGW456L13_4405	0.27	+0.3
4,920,839	-		PfGW456L13_4405	0.31	-2.4