Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3674

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
4,130,925	+				+0.6
4,130,925	+				-0.5
4,130,926	-				-1.7
4,130,926	-				+0.1
4,131,021	+		PfGW456L13_3672	0.25	+0.0
4,131,021	+		PfGW456L13_3672	0.25	-0.9
4,131,021	+		PfGW456L13_3672	0.25	+0.5
4,131,021	+		PfGW456L13_3672	0.25	+0.9
4,131,022	-		PfGW456L13_3672	0.26	-0.3
4,131,022	-		PfGW456L13_3672	0.26	+0.3
4,131,050	+		PfGW456L13_3672	0.38	+0.6
4,131,051	-		PfGW456L13_3672	0.38	-0.5
4,131,138	-		PfGW456L13_3672	0.75	-0.7
4,131,221	+				+0.5
4,131,222	-				-0.2
4,131,222	-				-0.1
4,131,223	+				-0.5
4,131,223	+				+0.4
4,131,265	+				+0.3
4,131,265	+				-0.3
4,131,266	-				-0.3
4,131,340	+				+0.5
4,131,340	+				-0.8
4,131,340	+				-0.4
4,131,340	+				+1.2
4,131,341	-				-0.4
4,131,341	-				-0.4
4,131,343	+				-1.4
4,131,343	+				+0.3
4,131,343	+				-0.4
4,131,343	+				-0.2
4,131,343	+				-0.3
4,131,343	+				+0.1
4,131,343	+				-0.4
4,131,343	+				-2.0
4,131,343	+				+1.0
4,131,343	+				+0.5
4,131,343	+				+0.2
4,131,343	+				-0.9
4,131,343	+				-1.5
4,131,344	-				-1.3
4,131,344	-				+0.2
4,131,344	-				-0.5
4,131,344	-				+1.0
4,131,344	-				-1.2
4,131,344	-				+0.9
4,131,344	-				+0.5
4,131,344	-				+0.3
4,131,344	-				-0.4
4,131,382	+				-2.4
4,131,383	-				+0.5
4,131,383	-				+0.6
4,131,383	-				-0.6
4,131,425	+		PfGW456L13_3673	0.17	-0.5
4,131,425	+		PfGW456L13_3673	0.17	-1.4
4,131,425	+		PfGW456L13_3673	0.17	-1.1
4,131,426	-		PfGW456L13_3673	0.17	+0.7
4,131,426	-		PfGW456L13_3673	0.17	-0.4
4,131,426	-		PfGW456L13_3673	0.17	+0.9
4,131,449	+		PfGW456L13_3673	0.22	+0.2
4,131,449	+		PfGW456L13_3673	0.22	-2.1
4,131,449	+		PfGW456L13_3673	0.22	-1.5
4,131,449	+		PfGW456L13_3673	0.22	+0.1
4,131,449	+		PfGW456L13_3673	0.22	+0.1
4,131,449	+		PfGW456L13_3673	0.22	-0.2
4,131,449	+		PfGW456L13_3673	0.22	+0.1
4,131,450	-		PfGW456L13_3673	0.22	-0.2
4,131,450	-		PfGW456L13_3673	0.22	+1.3
4,131,566	-		PfGW456L13_3673	0.42	-0.5
4,131,609	+		PfGW456L13_3673	0.50	+2.9
4,131,609	+		PfGW456L13_3673	0.50	-0.5
4,131,609	+		PfGW456L13_3673	0.50	-1.8
4,131,629	+		PfGW456L13_3673	0.54	+0.7
4,131,629	+		PfGW456L13_3673	0.54	+0.9
4,131,629	+		PfGW456L13_3673	0.54	-0.7
4,131,630	-		PfGW456L13_3673	0.54	+1.4
4,131,630	-		PfGW456L13_3673	0.54	-0.5
4,131,726	+		PfGW456L13_3673	0.71	-0.6
4,131,726	+		PfGW456L13_3673	0.71	-0.2
4,131,726	+				-2.0
4,131,726	+		PfGW456L13_3673	0.71	+1.5
4,131,726	+		PfGW456L13_3673	0.71	-1.2
4,131,726	+		PfGW456L13_3673	0.71	-0.4
4,131,727	-		PfGW456L13_3673	0.71	-0.5
4,131,727	-		PfGW456L13_3673	0.71	-1.4
4,131,927	-				+0.2
4,131,960	+		PfGW456L13_3674	0.20	-1.7
4,131,960	+		PfGW456L13_3674	0.20	-1.2
4,131,960	+		PfGW456L13_3674	0.20	-0.2
4,131,960	+		PfGW456L13_3674	0.20	+0.4
4,131,961	-		PfGW456L13_3674	0.21	-0.5
4,131,961	-		PfGW456L13_3674	0.21	-0.9
4,131,962	+		PfGW456L13_3674	0.21	-0.6
4,131,962	+		PfGW456L13_3674	0.21	-1.0
4,131,962	+		PfGW456L13_3674	0.21	-2.5
4,131,962	+		PfGW456L13_3674	0.21	-0.2
4,131,963	-		PfGW456L13_3674	0.22	-0.0
4,131,963	-		PfGW456L13_3674	0.22	-0.8
4,131,963	-		PfGW456L13_3674	0.22	-1.4
4,131,994	+		PfGW456L13_3674	0.40	+2.4
4,132,127	+				+1.2
4,132,157	+				+0.2
4,132,157	+				+0.1
4,132,197	+				-1.0
4,132,197	+				-1.0
4,132,202	+				+0.9
4,132,203	-				+1.4
4,132,203	-				-0.7
4,132,257	+				+1.2
4,132,257	+				-1.0
4,132,258	-				+0.4
4,132,262	+				+0.6
4,132,262	+				-1.1
4,132,262	+				+0.6
4,132,263	-				+1.4
4,132,266	+				-0.7
4,132,267	-				-0.2
4,132,283	-				+0.9
4,132,286	+				-0.4
4,132,295	+				-0.1
4,132,295	+				+0.1
4,132,315	-				+0.5
4,132,341	+		PfGW456L13_3675	0.12	+0.0
4,132,341	+		PfGW456L13_3675	0.12	-0.4
4,132,341	+		PfGW456L13_3675	0.12	-0.1
4,132,342	-		PfGW456L13_3675	0.12	-1.1
4,132,359	+		PfGW456L13_3675	0.14	-0.6
4,132,359	+		PfGW456L13_3675	0.14	-0.5
4,132,360	-		PfGW456L13_3675	0.15	+2.0
4,132,374	-		PfGW456L13_3675	0.17	-0.8
4,132,374	-		PfGW456L13_3675	0.17	+0.6
4,132,398	+		PfGW456L13_3675	0.20	-0.4
4,132,399	-		PfGW456L13_3675	0.20	+0.3
4,132,399	-		PfGW456L13_3675	0.20	-0.7
4,132,415	+		PfGW456L13_3675	0.22	+0.6
4,132,415	+		PfGW456L13_3675	0.22	+0.8
4,132,416	-		PfGW456L13_3675	0.22	-1.4
4,132,416	-		PfGW456L13_3675	0.22	-1.2
4,132,416	-		PfGW456L13_3675	0.22	+0.2
4,132,416	-		PfGW456L13_3675	0.22	-0.0
4,132,416	-				+1.4
4,132,416	-		PfGW456L13_3675	0.22	-0.5
4,132,600	+		PfGW456L13_3675	0.48	+0.6
4,132,645	+		PfGW456L13_3675	0.54	+1.4
4,132,646	-		PfGW456L13_3675	0.55	-0.4
4,132,682	-		PfGW456L13_3675	0.60	-0.1
4,132,682	-		PfGW456L13_3675	0.60	+1.2
4,132,770	+		PfGW456L13_3675	0.72	-0.2
4,132,770	+		PfGW456L13_3675	0.72	+0.6
4,132,770	+		PfGW456L13_3675	0.72	-1.0
4,132,770	+		PfGW456L13_3675	0.72	+1.0
4,132,771	-		PfGW456L13_3675	0.72	-2.5
4,132,771	-		PfGW456L13_3675	0.72	+0.1
4,132,793	+		PfGW456L13_3675	0.75	-0.5
4,132,793	+		PfGW456L13_3675	0.75	+0.5
4,132,793	+		PfGW456L13_3675	0.75	+1.6
4,132,793	+		PfGW456L13_3675	0.75	+0.1
4,132,793	+		PfGW456L13_3675	0.75	-0.1
4,132,793	+		PfGW456L13_3675	0.75	+0.1
4,132,794	-		PfGW456L13_3675	0.75	-0.6
4,132,794	-		PfGW456L13_3675	0.75	+0.7
4,132,794	-		PfGW456L13_3675	0.75	+0.5
4,132,795	+		PfGW456L13_3675	0.75	-0.0
4,132,795	+		PfGW456L13_3675	0.75	-1.2
4,132,795	+		PfGW456L13_3675	0.75	+0.2
4,132,795	+		PfGW456L13_3675	0.75	+1.4
4,132,795	+		PfGW456L13_3675	0.75	+0.1
4,132,796	-		PfGW456L13_3675	0.76	-1.1
4,132,796	-		PfGW456L13_3675	0.76	+1.2
4,132,796	-		PfGW456L13_3675	0.76	+0.4
4,132,796	-		PfGW456L13_3675	0.76	-0.1
4,132,796	-		PfGW456L13_3675	0.76	-0.1
4,132,796	-		PfGW456L13_3675	0.76	+0.4
4,132,817	+		PfGW456L13_3675	0.79	+0.0
4,132,818	-		PfGW456L13_3675	0.79	+1.0
4,132,977	+				-0.3
4,132,978	-				+0.8
4,132,978	-				-0.8
4,132,978	-				-0.2
4,133,010	+				+1.1
4,133,010	+				-0.4
4,133,011	-				-0.8
4,133,011	-				-0.6
4,133,011	-				-0.9
4,133,067	+		PfGW456L13_3676	0.13	+0.6
4,133,067	+		PfGW456L13_3676	0.13	+0.3
4,133,067	+		PfGW456L13_3676	0.13	-1.0
4,133,067	+		PfGW456L13_3676	0.13	+0.9
4,133,067	+		PfGW456L13_3676	0.13	+0.8
4,133,068	-		PfGW456L13_3676	0.13	+0.6
4,133,068	-		PfGW456L13_3676	0.13	+0.8
4,133,068	-		PfGW456L13_3676	0.13	+0.2
4,133,076	+		PfGW456L13_3676	0.14	+0.4
4,133,076	+		PfGW456L13_3676	0.14	+0.6
4,133,077	-		PfGW456L13_3676	0.15	-0.4
4,133,077	-		PfGW456L13_3676	0.15	+0.5
4,133,077	-		PfGW456L13_3676	0.15	+0.4
4,133,077	-		PfGW456L13_3676	0.15	+0.2
4,133,093	+		PfGW456L13_3676	0.17	+0.4
4,133,094	-		PfGW456L13_3676	0.17	-0.6