Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2649

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
2,949,360	-				+0.1
2,949,365	-				-0.3
2,949,365	-				+1.1
2,949,365	-				+0.6
2,949,420	-				-0.2
2,949,420	-				+0.6
2,949,420	-				-0.3
2,949,549	-		PfGW456L13_2648	0.25	+0.7
2,949,549	-		PfGW456L13_2648	0.25	+0.4
2,949,549	-		PfGW456L13_2648	0.25	-0.6
2,949,558	-				+0.4
2,949,558	-		PfGW456L13_2648	0.27	+0.5
2,949,633	-		PfGW456L13_2648	0.37	-0.3
2,949,695	+		PfGW456L13_2648	0.45	-2.6
2,949,696	-		PfGW456L13_2648	0.45	-0.6
2,949,728	+		PfGW456L13_2648	0.49	-0.2
2,949,728	+		PfGW456L13_2648	0.49	+0.7
2,949,728	+		PfGW456L13_2648	0.49	-1.1
2,949,728	+		PfGW456L13_2648	0.49	-0.6
2,949,738	-		PfGW456L13_2648	0.51	+0.1
2,949,749	+		PfGW456L13_2648	0.52	-0.3
2,949,749	+		PfGW456L13_2648	0.52	+0.7
2,949,749	+		PfGW456L13_2648	0.52	+0.2
2,949,749	+		PfGW456L13_2648	0.52	-0.3
2,949,750	-		PfGW456L13_2648	0.52	-2.1
2,949,750	-		PfGW456L13_2648	0.52	-1.3
2,949,781	+		PfGW456L13_2648	0.56	+0.2
2,949,782	-		PfGW456L13_2648	0.57	+1.4
2,949,782	-		PfGW456L13_2648	0.57	-0.4
2,949,782	-		PfGW456L13_2648	0.57	-1.3
2,949,944	+		PfGW456L13_2648	0.78	+0.2
2,949,945	-		PfGW456L13_2648	0.78	-1.1
2,949,945	-		PfGW456L13_2648	0.78	-0.4
2,949,945	-		PfGW456L13_2648	0.78	-0.9
2,950,010	+		PfGW456L13_2648	0.87	-0.4
2,950,011	-		PfGW456L13_2648	0.87	-2.7
2,950,037	+				-1.0
2,950,038	-				-0.8
2,950,038	-				-0.4
2,950,038	-				-0.3
2,950,038	-				+1.9
2,950,094	+				-0.7
2,950,094	+				+0.5
2,950,095	-				-0.6
2,950,095	-				-1.1
2,950,095	-				-0.9
2,950,095	-				+0.3
2,950,100	+				+0.3
2,950,100	+				-0.1
2,950,100	+				-0.3
2,950,101	-				-1.5
2,950,101	-				-2.2
2,950,172	+				+0.7
2,950,172	+				+0.4
2,950,172	+				-0.6
2,950,172	+				+0.4
2,950,172	+				-0.6
2,950,173	-				-0.2
2,950,195	+		PfGW456L13_2649	0.11	+0.0
2,950,253	-		PfGW456L13_2649	0.19	-1.9
2,950,442	+		PfGW456L13_2649	0.47	+0.7
2,950,547	+		PfGW456L13_2649	0.62	-1.3
2,950,548	-		PfGW456L13_2649	0.62	-0.9
2,950,561	+		PfGW456L13_2649	0.64	-0.4
2,950,779	+				+0.1
2,950,779	+				+0.6
2,950,779	+				+0.3
2,950,780	-				+0.7
2,950,780	-				+1.0
2,950,780	-				-0.9
2,950,780	-				-0.3
2,950,780	-				+1.7
2,950,780	-				+0.6
2,950,780	-				-0.2
2,950,789	+				+2.1
2,950,789	+				+1.3
2,950,789	+				+0.8
2,950,789	+				+1.9
2,950,789	+				+0.3
2,950,789	+				+0.4
2,950,789	+				-1.0
2,950,790	-				-1.3
2,950,790	-				-0.8
2,950,790	-				+0.7
2,950,790	-				-0.5
2,950,790	-				+0.1
2,950,854	+				-2.3
2,950,937	+				-0.3
2,950,937	+				+1.0
2,950,937	+				-0.5
2,950,937	+				-0.1
2,950,937	+				+0.3
2,950,938	-				-0.3
2,951,035	-		PfGW456L13_2650	0.18	+0.1
2,951,041	+		PfGW456L13_2650	0.18	-0.6
2,951,335	+		PfGW456L13_2650	0.49	-0.7
2,951,336	-		PfGW456L13_2650	0.49	-0.6
2,951,336	-		PfGW456L13_2650	0.49	+0.9
2,951,470	+		PfGW456L13_2650	0.63	-0.9
2,951,515	+		PfGW456L13_2650	0.68	-0.9
2,951,515	+		PfGW456L13_2650	0.68	-0.2
2,951,515	+		PfGW456L13_2650	0.68	-0.7
2,951,516	-		PfGW456L13_2650	0.68	-0.4
2,951,516	-		PfGW456L13_2650	0.68	-0.7
2,951,516	-		PfGW456L13_2650	0.68	-0.5
2,951,516	-		PfGW456L13_2650	0.68	-1.9
2,951,581	+		PfGW456L13_2650	0.74	+0.2
2,951,756	-				-2.5
2,951,770	+				-1.3