Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2097

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
2,304,120	-				+0.4
2,304,120	-				+0.4
2,304,233	-				+1.6
2,304,233	-				-2.0
2,304,303	-				-0.9
2,304,324	-				-1.1
2,304,324	-				-1.1
2,304,436	-				-2.3
2,304,438	-				-0.9
2,304,451	-				-0.9
2,304,522	+				-1.7
2,304,522	+				+0.2
2,304,569	-				-0.7
2,304,569	-				-0.2
2,304,934	+		PfGW456L13_2097	0.46	-1.0
2,304,935	-		PfGW456L13_2097	0.46	+0.9
2,304,935	-		PfGW456L13_2097	0.46	-2.1
2,305,022	+		PfGW456L13_2097	0.55	+0.3
2,305,022	+		PfGW456L13_2097	0.55	+0.3
2,305,022	+		PfGW456L13_2097	0.55	+3.1
2,305,022	+		PfGW456L13_2097	0.55	-1.2
2,305,023	-		PfGW456L13_2097	0.55	+0.2
2,305,244	-		PfGW456L13_2097	0.78	-2.4
2,305,283	+		PfGW456L13_2097	0.82	+0.7
2,305,283	+		PfGW456L13_2097	0.82	+1.0
2,305,284	-		PfGW456L13_2097	0.82	-1.8
2,305,349	+		PfGW456L13_2097	0.89	+0.6
2,305,349	+		PfGW456L13_2097	0.89	-1.7
2,305,350	-		PfGW456L13_2097	0.89	-1.7
2,305,350	-		PfGW456L13_2097	0.89	-0.1
2,305,350	-		PfGW456L13_2097	0.89	-2.6
2,305,350	-		PfGW456L13_2097	0.89	-0.9
2,305,350	-		PfGW456L13_2097	0.89	-1.1
2,305,350	-		PfGW456L13_2097	0.89	-2.1
2,305,350	-		PfGW456L13_2097	0.89	-0.1
2,305,350	-		PfGW456L13_2097	0.89	-2.1
2,305,350	-		PfGW456L13_2097	0.89	+0.5
2,305,350	-		PfGW456L13_2097	0.89	+1.5
2,305,350	-		PfGW456L13_2097	0.89	-2.1
2,305,455	+				+0.5
2,305,455	+				+0.7
2,305,456	-				+0.6
2,305,665	+		PfGW456L13_2098	0.34	+0.7
2,305,665	+		PfGW456L13_2098	0.34	+0.0
2,305,666	-		PfGW456L13_2098	0.34	+0.3
2,305,666	-		PfGW456L13_2098	0.34	+0.5
2,305,677	+		PfGW456L13_2098	0.36	-1.7
2,305,677	+		PfGW456L13_2098	0.36	-1.2
2,305,677	+		PfGW456L13_2098	0.36	-1.3
2,305,677	+		PfGW456L13_2098	0.36	+0.7
2,305,677	+		PfGW456L13_2098	0.36	+0.0
2,305,677	+		PfGW456L13_2098	0.36	+0.5
2,305,677	+		PfGW456L13_2098	0.36	-0.1
2,305,677	+		PfGW456L13_2098	0.36	+0.3
2,305,677	+		PfGW456L13_2098	0.36	+0.3
2,305,677	+		PfGW456L13_2098	0.36	+0.6
2,305,677	+		PfGW456L13_2098	0.36	-0.1
2,305,677	+		PfGW456L13_2098	0.36	+0.0
2,305,678	-		PfGW456L13_2098	0.36	+0.9
2,305,678	-		PfGW456L13_2098	0.36	+0.9
2,305,678	-		PfGW456L13_2098	0.36	+1.0
2,305,678	-		PfGW456L13_2098	0.36	-0.3
2,305,678	-		PfGW456L13_2098	0.36	-1.0
2,305,678	-		PfGW456L13_2098	0.36	+0.9
2,305,678	-		PfGW456L13_2098	0.36	+0.5
2,305,678	-		PfGW456L13_2098	0.36	+2.3
2,305,678	-		PfGW456L13_2098	0.36	+0.2
2,305,678	-		PfGW456L13_2098	0.36	+0.5
2,305,678	-		PfGW456L13_2098	0.36	+0.2
2,305,678	-		PfGW456L13_2098	0.36	+0.7
2,305,755	+		PfGW456L13_2098	0.48	+0.2
2,305,755	+		PfGW456L13_2098	0.48	+0.3
2,305,830	+		PfGW456L13_2098	0.59	+0.9
2,305,830	+		PfGW456L13_2098	0.59	-0.4
2,305,831	-		PfGW456L13_2098	0.59	-2.4
2,306,004	+		PfGW456L13_2098	0.85	-0.4
2,306,004	+		PfGW456L13_2098	0.85	+0.5
2,306,005	-		PfGW456L13_2098	0.85	-1.9
2,306,005	-		PfGW456L13_2098	0.85	-0.3
2,306,005	-		PfGW456L13_2098	0.85	+0.5
2,306,037	+				+0.2
2,306,037	+				+0.8
2,306,037	+				+0.2
2,306,037	+				-1.2
2,306,038	-				-0.4
2,306,038	-				+1.6
2,306,221	+				+1.6
2,306,221	+				+0.4
2,306,222	-				-1.9
2,306,222	-				-0.1
2,306,222	-				-0.7
2,306,254	+		PfGW456L13_2099	0.13	+0.9
2,306,254	+		PfGW456L13_2099	0.13	-0.1
2,306,280	+		PfGW456L13_2099	0.15	-0.1
2,306,281	-		PfGW456L13_2099	0.16	-1.7
2,306,281	-		PfGW456L13_2099	0.16	+1.9
2,306,281	-		PfGW456L13_2099	0.16	+0.0
2,306,352	+		PfGW456L13_2099	0.23	+0.2
2,306,352	+		PfGW456L13_2099	0.23	-0.1
2,306,353	-		PfGW456L13_2099	0.23	+2.7
2,306,353	-		PfGW456L13_2099	0.23	-0.8
2,306,353	-		PfGW456L13_2099	0.23	+0.4
2,306,353	-		PfGW456L13_2099	0.23	-0.1
2,306,353	-		PfGW456L13_2099	0.23	-0.7
2,306,353	-		PfGW456L13_2099	0.23	+0.0
2,306,353	-		PfGW456L13_2099	0.23	-1.0
2,306,353	-		PfGW456L13_2099	0.23	-0.6
2,306,353	-		PfGW456L13_2099	0.23	+1.6
2,306,414	+		PfGW456L13_2099	0.29	+0.3
2,306,415	-		PfGW456L13_2099	0.29	-0.2