Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1808

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
1,990,111	+		PfGW456L13_1807	0.65	-0.3
1,990,112	-		PfGW456L13_1807	0.65	-0.3
1,990,247	+		PfGW456L13_1807	0.73	+0.4
1,990,280	+		PfGW456L13_1807	0.74	+0.0
1,990,280	+		PfGW456L13_1807	0.74	+0.0
1,990,320	-		PfGW456L13_1807	0.77	-1.6
1,990,320	-		PfGW456L13_1807	0.77	+0.0
1,990,320	-		PfGW456L13_1807	0.77	-0.9
1,990,334	+		PfGW456L13_1807	0.77	+0.6
1,990,334	+		PfGW456L13_1807	0.77	+0.8
1,990,334	+		PfGW456L13_1807	0.77	+0.8
1,990,335	-		PfGW456L13_1807	0.78	-0.1
1,990,349	+		PfGW456L13_1807	0.78	+2.3
1,990,349	+		PfGW456L13_1807	0.78	+1.1
1,990,349	+		PfGW456L13_1807	0.78	+0.0
1,990,350	-		PfGW456L13_1807	0.78	-0.2
1,990,350	-		PfGW456L13_1807	0.78	-0.3
1,990,350	-		PfGW456L13_1807	0.78	+0.6
1,990,350	-		PfGW456L13_1807	0.78	+0.5
1,990,350	-		PfGW456L13_1807	0.78	-0.1
1,990,350	-		PfGW456L13_1807	0.78	+0.6
1,990,350	-		PfGW456L13_1807	0.78	+0.3
1,990,350	-		PfGW456L13_1807	0.78	+1.9
1,990,350	-		PfGW456L13_1807	0.78	-0.3
1,990,564	-				+0.8
1,990,580	+				+0.2
1,990,580	+				-0.5
1,990,694	+				+0.2
1,990,694	+				+0.9
1,990,694	+				+0.2
1,990,694	+				+0.5
1,990,694	+				+0.1
1,990,694	+				+0.2
1,990,695	-				-0.7
1,990,695	-				+1.0
1,990,695	-				+1.6
1,990,695	-				+0.0
1,990,695	-				-1.9
1,990,695	-				-0.1
1,990,695	-				-1.0
1,990,695	-				+0.0
1,990,695	-				-0.1
1,990,695	-				-0.1
1,990,696	+				-1.5
1,990,696	+				-2.0
1,990,696	+				+0.6
1,990,696	+				+1.3
1,990,696	+				+0.3
1,990,740	+				+0.3
1,990,740	+				+0.4
1,990,741	-				+1.4
1,990,741	-				-2.6
1,990,741	-				+0.0
1,990,741	-				+1.3
1,990,751	+				-0.2
1,990,751	+				-0.9
1,990,769	+				-0.2
1,990,769	+				+0.1
1,990,770	-				+1.6
1,990,792	+				-0.5
1,990,792	+				-1.1
1,990,792	+				+0.7
1,990,793	-				+0.1
1,990,793	-				-0.4
1,990,793	-				-0.1
1,990,907	+				-0.1
1,990,961	+				+0.2
1,990,962	-				+0.3
1,990,972	+				-1.0
1,990,973	-				+0.1
1,992,519	-				+0.4
1,992,519	-				-0.2
1,992,519	-				-0.8
1,992,611	-		PfGW456L13_1809	0.21	+0.2
1,992,611	-		PfGW456L13_1809	0.21	+0.3
1,992,611	-		PfGW456L13_1809	0.21	-1.0
1,992,611	-		PfGW456L13_1809	0.21	-0.2
1,992,611	-		PfGW456L13_1809	0.21	+0.2
1,992,663	+		PfGW456L13_1809	0.34	-0.2
1,992,663	+		PfGW456L13_1809	0.34	-1.5
1,992,663	+		PfGW456L13_1809	0.34	+0.5
1,992,663	+		PfGW456L13_1809	0.34	+0.5
1,992,663	+		PfGW456L13_1809	0.34	-0.9
1,992,663	+		PfGW456L13_1809	0.34	-1.3
1,992,663	+		PfGW456L13_1809	0.34	-0.4
1,992,664	-		PfGW456L13_1809	0.34	-0.0
1,992,664	-		PfGW456L13_1809	0.34	+1.3
1,992,664	-		PfGW456L13_1809	0.34	+0.6
1,992,664	-		PfGW456L13_1809	0.34	-0.1
1,992,664	-		PfGW456L13_1809	0.34	-0.0
1,992,664	-		PfGW456L13_1809	0.34	-0.5
1,992,664	-		PfGW456L13_1809	0.34	-0.5
1,992,891	+				-1.8
1,992,892	-				+0.4
1,992,892	-				-0.8
1,992,906	+				+0.2
1,992,906	+				-2.7
1,992,907	-				-1.7
1,992,925	+				-0.4
1,992,925	+				+1.1
1,992,925	+				+0.7
1,992,925	+				-0.1
1,992,926	-				+1.0
1,992,930	+				-0.5
1,992,930	+				-0.5
1,992,930	+				+0.7
1,992,930	+				-0.3
1,992,931	-				+0.5
1,992,931	-				+1.0
1,992,931	-				-0.4
1,993,032	+				-0.6
1,993,032	+				+0.1
1,993,032	+				-1.6
1,993,032	+				-1.0
1,993,032	+				-0.1
1,993,032	+				-0.4
1,993,032	+				-0.4
1,993,032	+				-0.7
1,993,032	+				-0.5
1,993,033	-				+0.2
1,993,033	-				+1.0
1,993,033	-				-0.6
1,993,033	-				-1.0
1,993,033	-				+0.6
1,993,033	-				-0.2
1,993,033	-				-0.7
1,993,033	-				+0.0
1,993,033	-				+0.6
1,993,033	-				+0.3
1,993,045	+				-0.6
1,993,045	+				+0.8
1,993,046	-				+0.5
1,993,046	-				+0.6
1,993,046	-				+0.4
1,993,080	+				-0.8
1,993,080	+				+0.1
1,993,080	+				+1.7
1,993,081	-				-2.7
1,993,081	-				-0.1
1,993,123	+		PfGW456L13_1810	0.14	-0.2
1,993,123	+		PfGW456L13_1810	0.14	-0.7
1,993,124	-		PfGW456L13_1810	0.14	-0.8
1,993,158	+		PfGW456L13_1810	0.17	+0.2
1,993,158	+		PfGW456L13_1810	0.17	-0.7
1,993,158	+		PfGW456L13_1810	0.17	+0.4
1,993,159	-		PfGW456L13_1810	0.17	+0.6
1,993,284	+		PfGW456L13_1810	0.28	+1.7
1,993,284	+		PfGW456L13_1810	0.28	-0.1
1,993,284	+		PfGW456L13_1810	0.28	+0.2
1,993,284	+		PfGW456L13_1810	0.28	+2.0
1,993,284	+		PfGW456L13_1810	0.28	-0.4
1,993,285	-		PfGW456L13_1810	0.28	-0.2
1,993,334	-		PfGW456L13_1810	0.33	+0.3
1,993,334	-		PfGW456L13_1810	0.33	-1.0
1,993,334	-		PfGW456L13_1810	0.33	-1.1
1,993,334	-		PfGW456L13_1810	0.33	+0.7
1,993,336	+		PfGW456L13_1810	0.33	+1.2
1,993,336	+		PfGW456L13_1810	0.33	-0.2
1,993,336	+		PfGW456L13_1810	0.33	+1.0
1,993,337	-		PfGW456L13_1810	0.33	-0.1
1,993,392	+		PfGW456L13_1810	0.38	-1.3
1,993,473	+		PfGW456L13_1810	0.45	+2.6
1,993,473	+		PfGW456L13_1810	0.45	-0.3
1,993,474	-		PfGW456L13_1810	0.45	+1.0
1,993,474	-		PfGW456L13_1810	0.45	-0.9
1,993,474	-		PfGW456L13_1810	0.45	-1.7
1,993,483	-		PfGW456L13_1810	0.46	-0.0
1,993,483	-		PfGW456L13_1810	0.46	+0.3