Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1667

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
1,833,336	+		PfGW456L13_1666	0.47	-1.3
1,833,337	-		PfGW456L13_1666	0.47	+0.7
1,833,363	+		PfGW456L13_1666	0.50	-0.1
1,833,363	+		PfGW456L13_1666	0.50	-0.8
1,833,363	+		PfGW456L13_1666	0.50	-0.8
1,833,363	+		PfGW456L13_1666	0.50	-0.4
1,833,363	+		PfGW456L13_1666	0.50	-0.2
1,833,363	+		PfGW456L13_1666	0.50	-0.5
1,833,364	-		PfGW456L13_1666	0.50	+0.6
1,833,364	-		PfGW456L13_1666	0.50	+0.7
1,833,364	-		PfGW456L13_1666	0.50	+0.9
1,833,364	-		PfGW456L13_1666	0.50	+0.4
1,833,364	-		PfGW456L13_1666	0.50	+0.0
1,833,364	-		PfGW456L13_1666	0.50	+0.2
1,833,364	-		PfGW456L13_1666	0.50	-0.8
1,833,435	+		PfGW456L13_1666	0.57	-1.3
1,833,436	-		PfGW456L13_1666	0.57	-1.9
1,833,627	+		PfGW456L13_1666	0.77	+0.8
1,833,627	+		PfGW456L13_1666	0.77	-0.3
1,833,627	+		PfGW456L13_1666	0.77	+0.6
1,833,816	+				-0.5
1,833,816	+				-0.5
1,833,817	-				-1.5
1,833,817	-				-0.8
1,833,817	-				+0.3
1,833,817	-				+0.2
1,833,899	-				-1.4
1,833,902	+				+0.1
1,833,921	-				-0.3
1,833,921	-				-0.2
1,833,932	-				-1.5
1,833,932	-				-0.3
1,833,994	+				+0.7
1,833,994	+				+0.4
1,833,995	-				+0.0
1,833,995	-				-1.3
1,834,161	+				-1.3
1,834,161	+				-0.8
1,834,161	+				-0.6
1,834,161	+				-2.0
1,834,161	+				+0.0
1,834,162	-				-0.1
1,834,162	-				-0.7
1,834,172	-				-0.8
1,834,277	+				-0.3
1,834,278	-				-0.9
1,834,569	+		PfGW456L13_1667	0.25	-0.7
1,834,569	+		PfGW456L13_1667	0.25	-0.7
1,834,570	-		PfGW456L13_1667	0.25	+0.3
1,834,570	-		PfGW456L13_1667	0.25	-0.2
1,834,570	-		PfGW456L13_1667	0.25	-3.3
1,834,570	-		PfGW456L13_1667	0.25	-1.0
1,834,611	-		PfGW456L13_1667	0.28	-1.8
1,834,633	-		PfGW456L13_1667	0.29	-1.7
1,834,633	-		PfGW456L13_1667	0.29	+0.1
1,834,633	-		PfGW456L13_1667	0.29	+1.5
1,834,633	-		PfGW456L13_1667	0.29	-1.0
1,834,755	+		PfGW456L13_1667	0.38	+0.0
1,834,755	+		PfGW456L13_1667	0.38	+0.9
1,834,755	+		PfGW456L13_1667	0.38	-0.6
1,834,756	-		PfGW456L13_1667	0.38	-1.3
1,834,756	-		PfGW456L13_1667	0.38	-0.1
1,834,756	-		PfGW456L13_1667	0.38	+0.0
1,835,187	+		PfGW456L13_1667	0.66	+0.0
1,835,187	+		PfGW456L13_1667	0.66	-0.3
1,835,188	-		PfGW456L13_1667	0.66	-0.7
1,835,188	-		PfGW456L13_1667	0.66	-0.3
1,835,241	+		PfGW456L13_1667	0.70	-2.0
1,835,241	+		PfGW456L13_1667	0.70	+0.0
1,835,242	-		PfGW456L13_1667	0.70	-1.4
1,835,242	-		PfGW456L13_1667	0.70	-0.4
1,835,242	-		PfGW456L13_1667	0.70	-0.5
1,835,242	-		PfGW456L13_1667	0.70	-0.7
1,835,343	+		PfGW456L13_1667	0.77	+0.1
1,835,460	+		PfGW456L13_1667	0.85	-1.7
1,835,460	+		PfGW456L13_1667	0.85	+1.3
1,835,460	+		PfGW456L13_1667	0.85	-0.2
1,835,461	-		PfGW456L13_1667	0.85	-0.9
1,835,461	-		PfGW456L13_1667	0.85	-1.1
1,835,502	+		PfGW456L13_1667	0.87	-0.2
1,835,502	+		PfGW456L13_1667	0.87	-0.4
1,835,503	-		PfGW456L13_1667	0.87	-2.9
1,835,503	-		PfGW456L13_1667	0.87	+0.4
1,835,631	-				-0.2
1,835,721	+				-0.4
1,835,721	+				-0.2
1,835,776	+				+0.5
1,835,777	-				-0.8
1,835,840	-				+0.5
1,835,852	+				+0.6
1,835,852	+				-0.2
1,835,853	-				-0.4
1,835,853	-				-0.2
1,835,853	-				-0.5
1,835,853	-				-1.0
1,835,853	-				+0.2
1,835,876	+				-0.6
1,835,980	+		PfGW456L13_1668	0.11	+1.5
1,835,981	-		PfGW456L13_1668	0.11	-0.2
1,836,131	-		PfGW456L13_1668	0.18	+1.0
1,836,140	+		PfGW456L13_1668	0.18	-0.0
1,836,316	+		PfGW456L13_1668	0.26	-0.8
1,836,316	+		PfGW456L13_1668	0.26	-0.8
1,836,316	+		PfGW456L13_1668	0.26	+0.2
1,836,317	-		PfGW456L13_1668	0.26	+0.1
1,836,317	-		PfGW456L13_1668	0.26	+0.0
1,836,317	-		PfGW456L13_1668	0.26	-0.6