Experiment: m.b. Rifampicin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2341 and B158DRAFT_2342 are separated by 335 nucleotides B158DRAFT_2342 and B158DRAFT_2343 overlap by 4 nucleotides B158DRAFT_2343 and B158DRAFT_2344 are separated by 131 nucleotides
B158DRAFT_2341: B158DRAFT_2341 - Excinuclease ABC subunit B, at 505,885 to 507,873
_2341
B158DRAFT_2342: B158DRAFT_2342 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 508,209 to 508,850
_2342
B158DRAFT_2343: B158DRAFT_2343 - transcriptional activator RfaH, at 508,847 to 509,350
_2343
B158DRAFT_2344: B158DRAFT_2344 - 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7), at 509,482 to 510,339
_2344
Position (kb) 508
509 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 507.324 kb on - strand, within B158DRAFT_2341 at 507.334 kb on - strand, within B158DRAFT_2341 at 507.386 kb on + strand, within B158DRAFT_2341 at 507.386 kb on + strand, within B158DRAFT_2341 at 507.386 kb on + strand, within B158DRAFT_2341 at 507.394 kb on - strand, within B158DRAFT_2341 at 507.404 kb on - strand, within B158DRAFT_2341 at 507.404 kb on - strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.406 kb on + strand, within B158DRAFT_2341 at 507.407 kb on + strand, within B158DRAFT_2341 at 507.409 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.414 kb on - strand, within B158DRAFT_2341 at 507.440 kb on + strand, within B158DRAFT_2341 at 507.459 kb on + strand, within B158DRAFT_2341 at 507.459 kb on - strand, within B158DRAFT_2341 at 507.468 kb on - strand, within B158DRAFT_2341 at 507.509 kb on + strand, within B158DRAFT_2341 at 507.557 kb on - strand, within B158DRAFT_2341 at 507.629 kb on + strand, within B158DRAFT_2341 at 507.629 kb on + strand, within B158DRAFT_2341 at 507.637 kb on - strand, within B158DRAFT_2341 at 507.637 kb on - strand, within B158DRAFT_2341 at 507.682 kb on - strand at 507.729 kb on + strand at 507.737 kb on - strand at 507.737 kb on - strand at 507.759 kb on - strand at 507.869 kb on + strand at 507.869 kb on + strand at 507.869 kb on + strand at 507.877 kb on - strand at 507.877 kb on - strand at 507.877 kb on - strand at 507.893 kb on + strand at 507.893 kb on + strand at 507.893 kb on + strand at 507.900 kb on - strand at 507.900 kb on - strand at 507.901 kb on - strand at 507.901 kb on - strand at 507.904 kb on + strand at 507.904 kb on + strand at 507.907 kb on - strand at 507.907 kb on - strand at 507.907 kb on - strand at 507.912 kb on - strand at 507.912 kb on - strand at 507.916 kb on - strand at 507.916 kb on - strand at 507.949 kb on + strand at 507.949 kb on + strand at 507.949 kb on + strand at 507.957 kb on - strand at 507.959 kb on + strand at 507.959 kb on + strand at 507.971 kb on + strand at 507.972 kb on + strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.980 kb on - strand at 508.023 kb on - strand at 508.058 kb on - strand at 508.067 kb on - strand at 508.071 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.099 kb on + strand at 508.105 kb on - strand at 508.109 kb on + strand at 508.121 kb on + strand at 508.135 kb on + strand at 508.155 kb on + strand at 508.155 kb on + strand at 508.155 kb on + strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.202 kb on - strand at 508.202 kb on - strand at 508.202 kb on - strand at 508.310 kb on + strand, within B158DRAFT_2342 at 508.318 kb on - strand, within B158DRAFT_2342 at 508.318 kb on - strand, within B158DRAFT_2342 at 508.322 kb on - strand, within B158DRAFT_2342 at 508.377 kb on + strand, within B158DRAFT_2342 at 508.409 kb on - strand, within B158DRAFT_2342 at 508.419 kb on - strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.453 kb on - strand, within B158DRAFT_2342 at 508.453 kb on - strand, within B158DRAFT_2342 at 508.462 kb on + strand, within B158DRAFT_2342 at 508.462 kb on + strand, within B158DRAFT_2342 at 508.470 kb on - strand, within B158DRAFT_2342 at 508.470 kb on - strand, within B158DRAFT_2342 at 508.486 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.540 kb on - strand, within B158DRAFT_2342 at 508.540 kb on - strand, within B158DRAFT_2342 at 508.601 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.621 kb on - strand, within B158DRAFT_2342 at 508.623 kb on + strand, within B158DRAFT_2342 at 508.631 kb on - strand, within B158DRAFT_2342 at 508.655 kb on - strand, within B158DRAFT_2342 at 508.695 kb on + strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.781 kb on - strand, within B158DRAFT_2342 at 508.793 kb on - strand at 508.896 kb on - strand at 509.038 kb on + strand, within B158DRAFT_2343 at 509.040 kb on + strand, within B158DRAFT_2343 at 509.040 kb on - strand, within B158DRAFT_2343 at 509.055 kb on + strand, within B158DRAFT_2343 at 509.058 kb on - strand, within B158DRAFT_2343 at 509.063 kb on - strand, within B158DRAFT_2343 at 509.108 kb on + strand, within B158DRAFT_2343 at 509.108 kb on + strand, within B158DRAFT_2343 at 509.116 kb on - strand, within B158DRAFT_2343 at 509.120 kb on + strand, within B158DRAFT_2343 at 509.128 kb on - strand, within B158DRAFT_2343 at 509.128 kb on - strand, within B158DRAFT_2343 at 509.140 kb on - strand, within B158DRAFT_2343 at 509.353 kb on - strand at 509.391 kb on - strand at 509.406 kb on + strand at 509.514 kb on + strand at 509.522 kb on - strand at 509.784 kb on - strand, within B158DRAFT_2344
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml remove 507,324 - B158DRAFT_2341 0.72 -2.8 507,334 - B158DRAFT_2341 0.73 -2.2 507,386 + B158DRAFT_2341 0.75 -2.4 507,386 + B158DRAFT_2341 0.75 -2.7 507,386 + B158DRAFT_2341 0.75 -2.9 507,394 - B158DRAFT_2341 0.76 -3.9 507,404 - B158DRAFT_2341 0.76 -2.9 507,404 - B158DRAFT_2341 0.76 -3.1 507,406 + B158DRAFT_2341 0.76 -1.7 507,406 + B158DRAFT_2341 0.76 -2.2 507,406 + B158DRAFT_2341 0.76 -3.2 507,406 + B158DRAFT_2341 0.76 -2.4 507,406 + B158DRAFT_2341 0.76 -3.2 507,406 + B158DRAFT_2341 0.76 -2.6 507,406 + B158DRAFT_2341 0.76 -2.8 507,406 + B158DRAFT_2341 0.76 -2.9 507,406 + B158DRAFT_2341 0.76 -2.3 507,406 + B158DRAFT_2341 0.76 -2.6 507,406 + B158DRAFT_2341 0.76 -2.6 507,406 + B158DRAFT_2341 0.76 -0.4 507,406 + B158DRAFT_2341 0.76 -3.4 507,406 + B158DRAFT_2341 0.76 -2.0 507,406 + B158DRAFT_2341 0.76 -2.9 507,407 + B158DRAFT_2341 0.77 -1.8 507,409 - B158DRAFT_2341 0.77 -4.6 507,414 - B158DRAFT_2341 0.77 -2.7 507,414 - B158DRAFT_2341 0.77 -3.7 507,414 - B158DRAFT_2341 0.77 -2.7 507,414 - B158DRAFT_2341 0.77 -4.3 507,414 - B158DRAFT_2341 0.77 -3.6 507,414 - B158DRAFT_2341 0.77 -2.9 507,414 - B158DRAFT_2341 0.77 -3.1 507,414 - B158DRAFT_2341 0.77 -2.3 507,440 + B158DRAFT_2341 0.78 -1.6 507,459 + B158DRAFT_2341 0.79 -1.3 507,459 - B158DRAFT_2341 0.79 -3.7 507,468 - B158DRAFT_2341 0.80 -2.7 507,509 + B158DRAFT_2341 0.82 -2.4 507,557 - B158DRAFT_2341 0.84 -2.0 507,629 + B158DRAFT_2341 0.88 -1.8 507,629 + B158DRAFT_2341 0.88 -2.6 507,637 - B158DRAFT_2341 0.88 -3.2 507,637 - B158DRAFT_2341 0.88 -2.2 507,682 - -0.1 507,729 + -2.0 507,737 - -1.1 507,737 - -2.3 507,759 - -1.7 507,869 + -0.1 507,869 + -0.3 507,869 + -0.6 507,877 - -0.1 507,877 - -0.1 507,877 - -0.4 507,893 + -0.1 507,893 + -0.3 507,893 + -0.8 507,900 - +0.4 507,900 - +0.1 507,901 - -0.1 507,901 - -0.4 507,904 + -0.4 507,904 + +0.2 507,907 - -0.5 507,907 - +0.4 507,907 - -0.0 507,912 - -0.1 507,912 - +1.7 507,916 - -0.1 507,916 - +0.4 507,949 + -0.3 507,949 + +0.2 507,949 + -0.5 507,957 - -0.5 507,959 + -0.2 507,959 + +0.0 507,971 + -0.2 507,972 + -0.2 507,979 - -0.1 507,979 - +0.1 507,979 - -0.3 507,979 - +0.2 507,980 - +0.0 508,023 - -0.6 508,058 - +0.6 508,067 - +0.4 508,071 + -0.7 508,078 + +0.1 508,078 + +0.2 508,078 + -0.0 508,078 + +0.1 508,078 + +0.1 508,078 + +0.1 508,078 + -0.3 508,078 + +0.1 508,086 - +1.1 508,086 - +1.3 508,086 - +0.6 508,086 - +0.7 508,086 - +1.0 508,086 - +1.1 508,086 - +1.4 508,086 - +1.2 508,086 - +1.1 508,086 - +1.3 508,099 + -0.2 508,105 - +1.2 508,109 + -0.1 508,121 + +0.1 508,135 + -0.3 508,155 + +0.1 508,155 + -0.3 508,155 + +0.0 508,163 - +1.4 508,163 - +1.0 508,163 - +0.9 508,163 - +1.0 508,202 - +0.9 508,202 - +0.8 508,202 - +1.1 508,310 + B158DRAFT_2342 0.16 +1.2 508,318 - B158DRAFT_2342 0.17 +1.3 508,318 - B158DRAFT_2342 0.17 +1.9 508,322 - B158DRAFT_2342 0.18 +0.8 508,377 + B158DRAFT_2342 0.26 +1.9 508,409 - B158DRAFT_2342 0.31 +0.5 508,419 - B158DRAFT_2342 0.33 +0.7 508,445 + B158DRAFT_2342 0.37 +1.1 508,445 + B158DRAFT_2342 0.37 +1.2 508,445 + B158DRAFT_2342 0.37 +1.0 508,445 + B158DRAFT_2342 0.37 +1.0 508,445 + B158DRAFT_2342 0.37 +1.1 508,445 + B158DRAFT_2342 0.37 +0.9 508,453 - B158DRAFT_2342 0.38 +0.4 508,453 - B158DRAFT_2342 0.38 +0.2 508,462 + B158DRAFT_2342 0.39 +0.6 508,462 + B158DRAFT_2342 0.39 +1.6 508,470 - B158DRAFT_2342 0.41 +0.1 508,470 - B158DRAFT_2342 0.41 +1.0 508,486 + B158DRAFT_2342 0.43 +1.4 508,532 + B158DRAFT_2342 0.50 +0.9 508,532 + B158DRAFT_2342 0.50 +0.6 508,532 + B158DRAFT_2342 0.50 +0.6 508,540 - B158DRAFT_2342 0.52 +0.5 508,540 - B158DRAFT_2342 0.52 +0.9 508,601 + B158DRAFT_2342 0.61 +1.4 508,612 + B158DRAFT_2342 0.63 +0.5 508,612 + B158DRAFT_2342 0.63 +0.9 508,612 + B158DRAFT_2342 0.63 +1.2 508,612 + B158DRAFT_2342 0.63 +1.0 508,612 + B158DRAFT_2342 0.63 +1.4 508,612 + B158DRAFT_2342 0.63 +1.2 508,612 + B158DRAFT_2342 0.63 +0.8 508,612 + B158DRAFT_2342 0.63 +2.7 508,620 - B158DRAFT_2342 0.64 +0.9 508,620 - B158DRAFT_2342 0.64 +0.4 508,620 - B158DRAFT_2342 0.64 +0.8 508,621 - B158DRAFT_2342 0.64 +0.9 508,623 + B158DRAFT_2342 0.64 +0.8 508,631 - B158DRAFT_2342 0.66 +0.8 508,655 - B158DRAFT_2342 0.69 +0.5 508,695 + B158DRAFT_2342 0.76 +0.9 508,703 - B158DRAFT_2342 0.77 +1.8 508,703 - B158DRAFT_2342 0.77 +0.3 508,703 - B158DRAFT_2342 0.77 +0.8 508,703 - B158DRAFT_2342 0.77 +0.6 508,781 - B158DRAFT_2342 0.89 +0.9 508,793 - +0.7 508,896 - +0.9 509,038 + B158DRAFT_2343 0.38 +1.5 509,040 + B158DRAFT_2343 0.38 +1.6 509,040 - B158DRAFT_2343 0.38 +2.1 509,055 + B158DRAFT_2343 0.41 +1.7 509,058 - B158DRAFT_2343 0.42 +1.7 509,063 - B158DRAFT_2343 0.43 +1.8 509,108 + B158DRAFT_2343 0.52 +1.5 509,108 + B158DRAFT_2343 0.52 +1.7 509,116 - B158DRAFT_2343 0.53 +1.4 509,120 + B158DRAFT_2343 0.54 +1.4 509,128 - B158DRAFT_2343 0.56 +1.6 509,128 - B158DRAFT_2343 0.56 +1.9 509,140 - B158DRAFT_2343 0.58 +2.2 509,353 - +0.6 509,391 - +1.1 509,406 + -0.3 509,514 + -0.1 509,522 - +1.8 509,784 - B158DRAFT_2344 0.35 -0.0
Or see this region's nucleotide sequence