Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2340

Experiment: m.b. Rifampicin 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2338 and B158DRAFT_2339 are separated by 157 nucleotidesB158DRAFT_2339 and B158DRAFT_2340 are separated by 92 nucleotidesB158DRAFT_2340 and B158DRAFT_2341 are separated by 123 nucleotides B158DRAFT_2338: B158DRAFT_2338 - Universal stress protein UspA and related nucleotide-binding proteins, at 503,406 to 504,257 _2338 B158DRAFT_2339: B158DRAFT_2339 - tRNA_Asn_GTT, at 504,415 to 504,490 _2339 B158DRAFT_2340: B158DRAFT_2340 - Aspartate/tyrosine/aromatic aminotransferase, at 504,583 to 505,761 _2340 B158DRAFT_2341: B158DRAFT_2341 - Excinuclease ABC subunit B, at 505,885 to 507,873 _2341 Position (kb) 504 505 506Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 503.669 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.823 kb on - strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.880 kb on - strand, within B158DRAFT_2338at 503.970 kb on - strand, within B158DRAFT_2338at 503.977 kb on + strand, within B158DRAFT_2338at 503.985 kb on - strand, within B158DRAFT_2338at 504.000 kb on - strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.073 kb on + strand, within B158DRAFT_2338at 504.075 kb on + strand, within B158DRAFT_2338at 504.083 kb on - strand, within B158DRAFT_2338at 504.093 kb on - strand, within B158DRAFT_2338at 504.135 kb on - strand, within B158DRAFT_2338at 504.160 kb on - strand, within B158DRAFT_2338at 504.215 kb on - strandat 504.273 kb on + strandat 504.282 kb on - strandat 504.353 kb on + strandat 504.403 kb on - strandat 504.643 kb on + strandat 504.651 kb on - strandat 504.845 kb on + strand, within B158DRAFT_2340at 505.012 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.092 kb on + strand, within B158DRAFT_2340at 505.116 kb on + strand, within B158DRAFT_2340at 505.128 kb on + strand, within B158DRAFT_2340at 505.192 kb on - strand, within B158DRAFT_2340at 505.226 kb on - strand, within B158DRAFT_2340at 505.236 kb on + strand, within B158DRAFT_2340at 505.268 kb on - strand, within B158DRAFT_2340at 505.298 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.395 kb on - strand, within B158DRAFT_2340at 505.395 kb on - strand, within B158DRAFT_2340at 505.397 kb on + strand, within B158DRAFT_2340at 505.428 kb on - strand, within B158DRAFT_2340at 505.519 kb on - strand, within B158DRAFT_2340at 505.530 kb on + strand, within B158DRAFT_2340at 505.538 kb on - strand, within B158DRAFT_2340at 505.617 kb on + strand, within B158DRAFT_2340at 505.617 kb on + strand, within B158DRAFT_2340at 505.669 kb on + strandat 505.669 kb on + strandat 505.669 kb on + strandat 505.669 kb on + strandat 505.676 kb on + strandat 505.676 kb on + strandat 505.676 kb on + strandat 505.677 kb on - strandat 505.677 kb on - strandat 505.677 kb on - strandat 505.684 kb on - strandat 505.684 kb on - strandat 505.786 kb on + strandat 505.850 kb on - strandat 505.914 kb on + strandat 505.933 kb on - strandat 505.943 kb on - strandat 506.014 kb on + strandat 506.014 kb on + strandat 506.014 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.019 kb on + strandat 506.022 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.027 kb on - strandat 506.103 kb on - strand, within B158DRAFT_2341at 506.108 kb on - strand, within B158DRAFT_2341at 506.197 kb on + strand, within B158DRAFT_2341at 506.237 kb on + strand, within B158DRAFT_2341at 506.247 kb on + strand, within B158DRAFT_2341at 506.299 kb on - strand, within B158DRAFT_2341at 506.317 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.334 kb on + strand, within B158DRAFT_2341at 506.342 kb on - strand, within B158DRAFT_2341at 506.342 kb on - strand, within B158DRAFT_2341at 506.342 kb on - strand, within B158DRAFT_2341at 506.342 kb on - strand, within B158DRAFT_2341at 506.342 kb on - strand, within B158DRAFT_2341at 506.349 kb on - strand, within B158DRAFT_2341at 506.349 kb on - strand, within B158DRAFT_2341at 506.349 kb on - strand, within B158DRAFT_2341at 506.354 kb on + strand, within B158DRAFT_2341at 506.364 kb on + strand, within B158DRAFT_2341at 506.364 kb on + strand, within B158DRAFT_2341at 506.376 kb on + strand, within B158DRAFT_2341at 506.419 kb on + strand, within B158DRAFT_2341at 506.427 kb on - strand, within B158DRAFT_2341at 506.443 kb on + strand, within B158DRAFT_2341at 506.451 kb on + strand, within B158DRAFT_2341at 506.561 kb on + strand, within B158DRAFT_2341at 506.561 kb on + strand, within B158DRAFT_2341at 506.606 kb on - strand, within B158DRAFT_2341at 506.658 kb on - strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.660 kb on + strand, within B158DRAFT_2341at 506.668 kb on - strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.670 kb on + strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.678 kb on - strand, within B158DRAFT_2341at 506.683 kb on - strand, within B158DRAFT_2341at 506.683 kb on - strand, within B158DRAFT_2341at 506.683 kb on - strand, within B158DRAFT_2341at 506.724 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.738 kb on + strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341at 506.746 kb on - strand, within B158DRAFT_2341

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml
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503,669 + B158DRAFT_2338 0.31 -0.1
503,813 + B158DRAFT_2338 0.48 -0.0
503,813 + B158DRAFT_2338 0.48 +0.2
503,813 + B158DRAFT_2338 0.48 -0.1
503,813 + B158DRAFT_2338 0.48 +0.2
503,813 + B158DRAFT_2338 0.48 -0.3
503,821 - B158DRAFT_2338 0.49 -0.5
503,821 - B158DRAFT_2338 0.49 +0.6
503,823 - B158DRAFT_2338 0.49 -0.1
503,872 + B158DRAFT_2338 0.55 -0.8
503,872 + B158DRAFT_2338 0.55 -0.4
503,880 - B158DRAFT_2338 0.56 +0.4
503,970 - B158DRAFT_2338 0.66 -0.8
503,977 + B158DRAFT_2338 0.67 +1.0
503,985 - B158DRAFT_2338 0.68 +0.2
504,000 - B158DRAFT_2338 0.70 -0.1
504,061 + B158DRAFT_2338 0.77 +0.2
504,061 + B158DRAFT_2338 0.77 -0.2
504,069 - B158DRAFT_2338 0.78 -0.5
504,069 - B158DRAFT_2338 0.78 -0.1
504,073 + B158DRAFT_2338 0.78 -0.7
504,075 + B158DRAFT_2338 0.79 +0.1
504,083 - B158DRAFT_2338 0.79 +0.0
504,093 - B158DRAFT_2338 0.81 +0.1
504,135 - B158DRAFT_2338 0.86 -0.2
504,160 - B158DRAFT_2338 0.88 +0.4
504,215 - -0.5
504,273 + -0.2
504,282 - -0.1
504,353 + -0.6
504,403 - +0.1
504,643 + +0.7
504,651 - +1.3
504,845 + B158DRAFT_2340 0.22 -1.2
505,012 + B158DRAFT_2340 0.36 +0.8
505,080 + B158DRAFT_2340 0.42 +0.6
505,080 + B158DRAFT_2340 0.42 +0.1
505,080 + B158DRAFT_2340 0.42 -0.2
505,080 + B158DRAFT_2340 0.42 -0.1
505,080 + B158DRAFT_2340 0.42 +0.4
505,088 - B158DRAFT_2340 0.43 +1.3
505,088 - B158DRAFT_2340 0.43 +1.3
505,088 - B158DRAFT_2340 0.43 +0.5
505,092 + B158DRAFT_2340 0.43 +0.2
505,116 + B158DRAFT_2340 0.45 +0.4
505,128 + B158DRAFT_2340 0.46 +0.2
505,192 - B158DRAFT_2340 0.52 +0.1
505,226 - B158DRAFT_2340 0.55 +0.1
505,236 + B158DRAFT_2340 0.55 +0.7
505,268 - B158DRAFT_2340 0.58 -0.2
505,298 + B158DRAFT_2340 0.61 +0.8
505,387 + B158DRAFT_2340 0.68 +0.4
505,387 + B158DRAFT_2340 0.68 +0.0
505,387 + B158DRAFT_2340 0.68 +0.5
505,387 + B158DRAFT_2340 0.68 -0.0
505,387 + B158DRAFT_2340 0.68 +0.7
505,387 + B158DRAFT_2340 0.68 +0.3
505,395 - B158DRAFT_2340 0.69 +0.6
505,395 - B158DRAFT_2340 0.69 +0.1
505,397 + B158DRAFT_2340 0.69 +0.3
505,428 - B158DRAFT_2340 0.72 +0.3
505,519 - B158DRAFT_2340 0.79 -0.2
505,530 + B158DRAFT_2340 0.80 +0.5
505,538 - B158DRAFT_2340 0.81 -1.1
505,617 + B158DRAFT_2340 0.88 -0.3
505,617 + B158DRAFT_2340 0.88 +0.3
505,669 + +0.6
505,669 + +0.3
505,669 + +0.5
505,669 + +0.1
505,676 + +0.4
505,676 + +0.0
505,676 + +0.1
505,677 - -1.1
505,677 - +0.1
505,677 - -0.9
505,684 - -0.8
505,684 - +0.1
505,786 + +0.9
505,850 - -2.9
505,914 + -2.1
505,933 - -2.2
505,943 - -2.5
506,014 + -3.1
506,014 + -2.2
506,014 + -2.0
506,019 + -3.2
506,019 + -2.5
506,019 + -2.6
506,019 + -2.6
506,019 + -4.4
506,019 + -3.2
506,019 + -2.9
506,022 - -3.2
506,027 - -3.1
506,027 - -3.1
506,027 - -0.0
506,027 - -2.8
506,027 - -2.5
506,027 - -1.3
506,027 - -2.5
506,027 - -1.7
506,103 - B158DRAFT_2341 0.11 -3.1
506,108 - B158DRAFT_2341 0.11 -2.8
506,197 + B158DRAFT_2341 0.16 -2.7
506,237 + B158DRAFT_2341 0.18 -2.7
506,247 + B158DRAFT_2341 0.18 -3.7
506,299 - B158DRAFT_2341 0.21 -2.3
506,317 + B158DRAFT_2341 0.22 -2.9
506,334 + B158DRAFT_2341 0.23 -1.7
506,334 + B158DRAFT_2341 0.23 -3.2
506,334 + B158DRAFT_2341 0.23 -2.4
506,334 + B158DRAFT_2341 0.23 -2.4
506,334 + B158DRAFT_2341 0.23 -2.8
506,334 + B158DRAFT_2341 0.23 -0.8
506,342 - B158DRAFT_2341 0.23 -3.3
506,342 - B158DRAFT_2341 0.23 -4.1
506,342 - B158DRAFT_2341 0.23 -2.3
506,342 - B158DRAFT_2341 0.23 -3.1
506,342 - B158DRAFT_2341 0.23 -2.9
506,349 - B158DRAFT_2341 0.23 -2.5
506,349 - B158DRAFT_2341 0.23 -3.2
506,349 - B158DRAFT_2341 0.23 -2.5
506,354 + B158DRAFT_2341 0.24 -2.9
506,364 + B158DRAFT_2341 0.24 -2.1
506,364 + B158DRAFT_2341 0.24 -1.5
506,376 + B158DRAFT_2341 0.25 -3.2
506,419 + B158DRAFT_2341 0.27 -2.4
506,427 - B158DRAFT_2341 0.27 -1.8
506,443 + B158DRAFT_2341 0.28 -3.0
506,451 + B158DRAFT_2341 0.28 -2.2
506,561 + B158DRAFT_2341 0.34 -1.8
506,561 + B158DRAFT_2341 0.34 -2.9
506,606 - B158DRAFT_2341 0.36 -3.4
506,658 - B158DRAFT_2341 0.39 -3.4
506,660 + B158DRAFT_2341 0.39 -2.0
506,660 + B158DRAFT_2341 0.39 -2.9
506,660 + B158DRAFT_2341 0.39 -3.3
506,660 + B158DRAFT_2341 0.39 -0.3
506,660 + B158DRAFT_2341 0.39 -2.4
506,660 + B158DRAFT_2341 0.39 +3.3
506,660 + B158DRAFT_2341 0.39 -2.6
506,660 + B158DRAFT_2341 0.39 -2.6
506,660 + B158DRAFT_2341 0.39 -2.9
506,660 + B158DRAFT_2341 0.39 -2.3
506,668 - B158DRAFT_2341 0.39 -3.2
506,670 + B158DRAFT_2341 0.39 -2.6
506,670 + B158DRAFT_2341 0.39 -2.7
506,670 + B158DRAFT_2341 0.39 -2.3
506,670 + B158DRAFT_2341 0.39 -1.4
506,670 + B158DRAFT_2341 0.39 -2.0
506,670 + B158DRAFT_2341 0.39 -2.7
506,670 + B158DRAFT_2341 0.39 -2.1
506,670 + B158DRAFT_2341 0.39 -2.2
506,670 + B158DRAFT_2341 0.39 -3.2
506,670 + B158DRAFT_2341 0.39 -3.2
506,670 + B158DRAFT_2341 0.39 -2.4
506,670 + B158DRAFT_2341 0.39 -2.1
506,670 + B158DRAFT_2341 0.39 -2.3
506,670 + B158DRAFT_2341 0.39 -2.4
506,678 - B158DRAFT_2341 0.40 -2.5
506,678 - B158DRAFT_2341 0.40 -2.8
506,678 - B158DRAFT_2341 0.40 -2.5
506,678 - B158DRAFT_2341 0.40 -2.0
506,678 - B158DRAFT_2341 0.40 -2.4
506,678 - B158DRAFT_2341 0.40 -2.9
506,678 - B158DRAFT_2341 0.40 -2.4
506,678 - B158DRAFT_2341 0.40 -1.8
506,678 - B158DRAFT_2341 0.40 -3.7
506,678 - B158DRAFT_2341 0.40 -2.7
506,678 - B158DRAFT_2341 0.40 -3.5
506,678 - B158DRAFT_2341 0.40 -4.1
506,683 - B158DRAFT_2341 0.40 -3.7
506,683 - B158DRAFT_2341 0.40 -2.9
506,683 - B158DRAFT_2341 0.40 -3.0
506,724 + B158DRAFT_2341 0.42 -2.7
506,738 + B158DRAFT_2341 0.43 -4.4
506,738 + B158DRAFT_2341 0.43 -1.5
506,738 + B158DRAFT_2341 0.43 -2.9
506,738 + B158DRAFT_2341 0.43 -2.6
506,738 + B158DRAFT_2341 0.43 -3.8
506,738 + B158DRAFT_2341 0.43 -1.8
506,738 + B158DRAFT_2341 0.43 -1.2
506,738 + B158DRAFT_2341 0.43 -1.3
506,738 + B158DRAFT_2341 0.43 -2.5
506,738 + B158DRAFT_2341 0.43 -2.0
506,738 + B158DRAFT_2341 0.43 -1.7
506,746 - B158DRAFT_2341 0.43 -2.4
506,746 - B158DRAFT_2341 0.43 -3.0
506,746 - B158DRAFT_2341 0.43 -3.9
506,746 - B158DRAFT_2341 0.43 -2.1
506,746 - B158DRAFT_2341 0.43 -2.9
506,746 - B158DRAFT_2341 0.43 -2.8
506,746 - B158DRAFT_2341 0.43 -2.0

Or see this region's nucleotide sequence