Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2314

Experiment: m.b. Rifampicin 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2313 and B158DRAFT_2314 are separated by 19 nucleotidesB158DRAFT_2314 and B158DRAFT_2315 are separated by 105 nucleotidesB158DRAFT_2315 and B158DRAFT_2316 overlap by 1 nucleotides B158DRAFT_2313: B158DRAFT_2313 - Exopolyphosphatase, at 474,409 to 475,956 _2313 B158DRAFT_2314: B158DRAFT_2314 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 475,976 to 476,725 _2314 B158DRAFT_2315: B158DRAFT_2315 - proteobacterial dedicated sortase system response regulator, at 476,831 to 477,523 _2315 B158DRAFT_2316: B158DRAFT_2316 - Signal transduction histidine kinase, at 477,523 to 479,535 _2316 Position (kb) 475 476 477Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 474.976 kb on - strand, within B158DRAFT_2313at 474.997 kb on - strand, within B158DRAFT_2313at 475.025 kb on - strand, within B158DRAFT_2313at 475.054 kb on - strand, within B158DRAFT_2313at 475.093 kb on + strand, within B158DRAFT_2313at 475.210 kb on + strand, within B158DRAFT_2313at 475.210 kb on + strand, within B158DRAFT_2313at 475.217 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.224 kb on - strand, within B158DRAFT_2313at 475.236 kb on - strand, within B158DRAFT_2313at 475.238 kb on + strand, within B158DRAFT_2313at 475.283 kb on - strand, within B158DRAFT_2313at 475.283 kb on - strand, within B158DRAFT_2313at 475.297 kb on + strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.429 kb on + strand, within B158DRAFT_2313at 475.450 kb on - strand, within B158DRAFT_2313at 475.513 kb on - strand, within B158DRAFT_2313at 475.535 kb on + strand, within B158DRAFT_2313at 475.535 kb on - strand, within B158DRAFT_2313at 475.597 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.769 kb on + strand, within B158DRAFT_2313at 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on - strandat 475.817 kb on - strandat 475.853 kb on - strandat 475.889 kb on + strandat 475.889 kb on + strandat 475.897 kb on - strandat 475.897 kb on - strandat 475.907 kb on + strandat 475.907 kb on - strandat 475.915 kb on - strandat 475.915 kb on - strandat 475.998 kb on + strandat 476.013 kb on + strandat 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.098 kb on - strand, within B158DRAFT_2314at 476.169 kb on - strand, within B158DRAFT_2314at 476.177 kb on - strand, within B158DRAFT_2314at 476.192 kb on - strand, within B158DRAFT_2314at 476.216 kb on + strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.349 kb on + strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.429 kb on + strand, within B158DRAFT_2314at 476.437 kb on - strand, within B158DRAFT_2314at 476.439 kb on + strand, within B158DRAFT_2314at 476.505 kb on - strand, within B158DRAFT_2314at 476.644 kb on - strand, within B158DRAFT_2314at 476.755 kb on - strandat 476.806 kb on - strandat 476.819 kb on + strandat 476.913 kb on + strand, within B158DRAFT_2315at 476.928 kb on - strand, within B158DRAFT_2315at 476.951 kb on + strand, within B158DRAFT_2315at 476.972 kb on + strand, within B158DRAFT_2315at 476.998 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.080 kb on + strand, within B158DRAFT_2315at 477.086 kb on + strand, within B158DRAFT_2315at 477.088 kb on - strand, within B158DRAFT_2315at 477.088 kb on - strand, within B158DRAFT_2315at 477.088 kb on - strand, within B158DRAFT_2315at 477.088 kb on - strand, within B158DRAFT_2315at 477.088 kb on - strand, within B158DRAFT_2315at 477.177 kb on - strand, within B158DRAFT_2315at 477.185 kb on - strand, within B158DRAFT_2315at 477.269 kb on + strand, within B158DRAFT_2315at 477.270 kb on + strand, within B158DRAFT_2315at 477.278 kb on - strand, within B158DRAFT_2315at 477.298 kb on - strand, within B158DRAFT_2315at 477.298 kb on - strand, within B158DRAFT_2315at 477.303 kb on + strand, within B158DRAFT_2315at 477.303 kb on + strand, within B158DRAFT_2315at 477.311 kb on - strand, within B158DRAFT_2315at 477.401 kb on + strand, within B158DRAFT_2315at 477.630 kb on + strandat 477.630 kb on - strandat 477.642 kb on + strandat 477.650 kb on + strandat 477.658 kb on - strandat 477.718 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml
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474,976 - B158DRAFT_2313 0.37 +0.6
474,997 - B158DRAFT_2313 0.38 +1.1
475,025 - B158DRAFT_2313 0.40 +0.7
475,054 - B158DRAFT_2313 0.42 +0.7
475,093 + B158DRAFT_2313 0.44 +0.5
475,210 + B158DRAFT_2313 0.52 +0.8
475,210 + B158DRAFT_2313 0.52 +0.8
475,217 - B158DRAFT_2313 0.52 +0.8
475,218 - B158DRAFT_2313 0.52 +1.0
475,218 - B158DRAFT_2313 0.52 +1.2
475,218 - B158DRAFT_2313 0.52 +0.8
475,218 - B158DRAFT_2313 0.52 +0.6
475,218 - B158DRAFT_2313 0.52 +1.4
475,224 - B158DRAFT_2313 0.53 +0.9
475,236 - B158DRAFT_2313 0.53 +0.8
475,238 + B158DRAFT_2313 0.54 +0.5
475,283 - B158DRAFT_2313 0.56 +1.4
475,283 - B158DRAFT_2313 0.56 +0.7
475,297 + B158DRAFT_2313 0.57 +0.9
475,305 - B158DRAFT_2313 0.58 +0.5
475,305 - B158DRAFT_2313 0.58 +0.3
475,305 - B158DRAFT_2313 0.58 +0.6
475,429 + B158DRAFT_2313 0.66 +1.0
475,450 - B158DRAFT_2313 0.67 +1.4
475,513 - B158DRAFT_2313 0.71 +0.8
475,535 + B158DRAFT_2313 0.73 +0.3
475,535 - B158DRAFT_2313 0.73 +0.4
475,597 + B158DRAFT_2313 0.77 +0.8
475,644 + B158DRAFT_2313 0.80 +0.9
475,644 + B158DRAFT_2313 0.80 +1.0
475,644 + B158DRAFT_2313 0.80 +0.6
475,644 + B158DRAFT_2313 0.80 +0.8
475,644 + B158DRAFT_2313 0.80 +0.4
475,644 + B158DRAFT_2313 0.80 +0.5
475,644 + B158DRAFT_2313 0.80 +1.2
475,644 + B158DRAFT_2313 0.80 +0.8
475,644 + B158DRAFT_2313 0.80 +0.0
475,644 + B158DRAFT_2313 0.80 +1.0
475,644 + B158DRAFT_2313 0.80 +0.7
475,644 + B158DRAFT_2313 0.80 +0.5
475,644 + B158DRAFT_2313 0.80 +0.5
475,644 + B158DRAFT_2313 0.80 +0.6
475,644 + B158DRAFT_2313 0.80 +0.8
475,644 + B158DRAFT_2313 0.80 +0.5
475,644 + B158DRAFT_2313 0.80 -0.7
475,644 + B158DRAFT_2313 0.80 +1.3
475,644 + B158DRAFT_2313 0.80 +0.6
475,644 + B158DRAFT_2313 0.80 +0.8
475,644 + B158DRAFT_2313 0.80 +0.6
475,644 + B158DRAFT_2313 0.80 +1.4
475,644 + B158DRAFT_2313 0.80 +0.9
475,652 - B158DRAFT_2313 0.80 +0.7
475,652 - B158DRAFT_2313 0.80 +0.6
475,652 - B158DRAFT_2313 0.80 +1.1
475,652 - B158DRAFT_2313 0.80 +0.6
475,652 - B158DRAFT_2313 0.80 +0.5
475,652 - B158DRAFT_2313 0.80 +0.6
475,652 - B158DRAFT_2313 0.80 -0.0
475,652 - B158DRAFT_2313 0.80 +0.9
475,652 - B158DRAFT_2313 0.80 +0.8
475,652 - B158DRAFT_2313 0.80 +0.7
475,652 - B158DRAFT_2313 0.80 +1.0
475,652 - B158DRAFT_2313 0.80 +0.1
475,652 - B158DRAFT_2313 0.80 +1.1
475,652 - B158DRAFT_2313 0.80 -0.1
475,652 - B158DRAFT_2313 0.80 +0.7
475,652 - B158DRAFT_2313 0.80 +0.6
475,652 - B158DRAFT_2313 0.80 +0.9
475,652 - B158DRAFT_2313 0.80 +0.9
475,652 - B158DRAFT_2313 0.80 +0.6
475,652 - B158DRAFT_2313 0.80 +1.0
475,652 - B158DRAFT_2313 0.80 +0.8
475,769 + B158DRAFT_2313 0.88 +0.6
475,809 + +0.8
475,809 + +1.0
475,809 + +0.4
475,809 + +0.5
475,809 + +0.9
475,809 - +0.9
475,817 - +0.8
475,853 - +1.0
475,889 + +0.7
475,889 + +0.8
475,897 - +0.3
475,897 - +0.5
475,907 + +1.0
475,907 - +0.5
475,915 - +0.7
475,915 - +0.6
475,998 + +0.7
476,013 + +1.7
476,082 + B158DRAFT_2314 0.14 -0.9
476,082 + B158DRAFT_2314 0.14 +1.9
476,082 + B158DRAFT_2314 0.14 +1.8
476,082 + B158DRAFT_2314 0.14 +1.7
476,082 + B158DRAFT_2314 0.14 +2.3
476,082 + B158DRAFT_2314 0.14 +1.3
476,082 + B158DRAFT_2314 0.14 +2.2
476,090 + B158DRAFT_2314 0.15 +2.4
476,090 + B158DRAFT_2314 0.15 +1.8
476,090 + B158DRAFT_2314 0.15 +1.2
476,090 - B158DRAFT_2314 0.15 +0.7
476,090 - B158DRAFT_2314 0.15 +1.1
476,090 - B158DRAFT_2314 0.15 +1.4
476,090 - B158DRAFT_2314 0.15 +0.7
476,098 - B158DRAFT_2314 0.16 +1.1
476,169 - B158DRAFT_2314 0.26 +0.4
476,177 - B158DRAFT_2314 0.27 +1.4
476,192 - B158DRAFT_2314 0.29 +0.6
476,216 + B158DRAFT_2314 0.32 +1.5
476,224 - B158DRAFT_2314 0.33 +1.5
476,224 - B158DRAFT_2314 0.33 +1.6
476,224 - B158DRAFT_2314 0.33 +1.2
476,349 + B158DRAFT_2314 0.50 +0.9
476,357 - B158DRAFT_2314 0.51 -1.6
476,357 - B158DRAFT_2314 0.51 +0.8
476,357 - B158DRAFT_2314 0.51 +0.3
476,429 + B158DRAFT_2314 0.60 +1.5
476,437 - B158DRAFT_2314 0.61 +1.0
476,439 + B158DRAFT_2314 0.62 +2.0
476,505 - B158DRAFT_2314 0.71 +1.8
476,644 - B158DRAFT_2314 0.89 +2.1
476,755 - +0.1
476,806 - -1.4
476,819 + -0.2
476,913 + B158DRAFT_2315 0.12 -2.1
476,928 - B158DRAFT_2315 0.14 -0.9
476,951 + B158DRAFT_2315 0.17 -2.1
476,972 + B158DRAFT_2315 0.20 -2.6
476,998 + B158DRAFT_2315 0.24 -1.7
477,080 + B158DRAFT_2315 0.36 -2.9
477,080 + B158DRAFT_2315 0.36 -1.7
477,080 + B158DRAFT_2315 0.36 -2.3
477,080 + B158DRAFT_2315 0.36 -3.0
477,080 + B158DRAFT_2315 0.36 -2.1
477,080 + B158DRAFT_2315 0.36 -1.3
477,086 + B158DRAFT_2315 0.37 -2.0
477,088 - B158DRAFT_2315 0.37 -3.1
477,088 - B158DRAFT_2315 0.37 -2.3
477,088 - B158DRAFT_2315 0.37 -0.9
477,088 - B158DRAFT_2315 0.37 -2.0
477,088 - B158DRAFT_2315 0.37 -2.1
477,177 - B158DRAFT_2315 0.50 -2.5
477,185 - B158DRAFT_2315 0.51 +0.3
477,269 + B158DRAFT_2315 0.63 -0.9
477,270 + B158DRAFT_2315 0.63 -2.4
477,278 - B158DRAFT_2315 0.65 -2.1
477,298 - B158DRAFT_2315 0.67 -1.1
477,298 - B158DRAFT_2315 0.67 +0.2
477,303 + B158DRAFT_2315 0.68 +0.3
477,303 + B158DRAFT_2315 0.68 -3.8
477,311 - B158DRAFT_2315 0.69 -3.1
477,401 + B158DRAFT_2315 0.82 -1.7
477,630 + +2.4
477,630 - -0.2
477,642 + -0.6
477,650 + +1.0
477,658 - -2.6
477,718 - -0.7

Or see this region's nucleotide sequence