Experiment: m.b. Rifampicin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2016 and B158DRAFT_2017 are separated by 56 nucleotides B158DRAFT_2017 and B158DRAFT_2018 are separated by 181 nucleotides B158DRAFT_2018 and B158DRAFT_2019 overlap by 35 nucleotides
B158DRAFT_2016: B158DRAFT_2016 - Zn-dependent protease with chaperone function, at 145,744 to 146,640
_2016
B158DRAFT_2017: B158DRAFT_2017 - Protein of unknown function (DUF2799)., at 146,697 to 147,239
_2017
B158DRAFT_2018: B158DRAFT_2018 - tRNA dihydrouridine synthase A, at 147,421 to 148,380
_2018
B158DRAFT_2019: B158DRAFT_2019 - hypothetical protein, at 148,346 to 149,326
_2019
Position (kb) 147
148
149 Strain fitness (log2 ratio) -1
0
1 at 146.423 kb on - strand, within B158DRAFT_2016 at 146.435 kb on + strand, within B158DRAFT_2016 at 146.435 kb on + strand, within B158DRAFT_2016 at 146.443 kb on - strand, within B158DRAFT_2016 at 146.445 kb on + strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.453 kb on - strand, within B158DRAFT_2016 at 146.523 kb on - strand, within B158DRAFT_2016 at 146.582 kb on - strand at 146.692 kb on - strand at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.777 kb on + strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.785 kb on - strand, within B158DRAFT_2017 at 146.851 kb on + strand, within B158DRAFT_2017 at 146.874 kb on - strand, within B158DRAFT_2017 at 146.881 kb on + strand, within B158DRAFT_2017 at 146.941 kb on + strand, within B158DRAFT_2017 at 146.946 kb on + strand, within B158DRAFT_2017 at 146.985 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.988 kb on + strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.996 kb on - strand, within B158DRAFT_2017 at 146.998 kb on + strand, within B158DRAFT_2017 at 147.006 kb on - strand, within B158DRAFT_2017 at 147.008 kb on - strand, within B158DRAFT_2017 at 147.095 kb on - strand, within B158DRAFT_2017 at 147.224 kb on + strand at 147.232 kb on - strand at 147.233 kb on - strand at 147.248 kb on - strand at 147.285 kb on - strand at 147.340 kb on - strand at 147.340 kb on - strand at 147.391 kb on + strand at 147.391 kb on + strand at 147.392 kb on - strand at 147.399 kb on - strand at 147.399 kb on - strand at 147.399 kb on - strand at 147.424 kb on - strand at 147.424 kb on - strand at 147.426 kb on + strand at 147.426 kb on + strand at 147.431 kb on + strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.434 kb on - strand at 147.440 kb on + strand at 147.475 kb on - strand at 147.475 kb on - strand at 147.482 kb on - strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.483 kb on + strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.491 kb on - strand at 147.522 kb on + strand, within B158DRAFT_2018 at 147.574 kb on + strand, within B158DRAFT_2018 at 147.574 kb on + strand, within B158DRAFT_2018 at 147.624 kb on - strand, within B158DRAFT_2018 at 147.668 kb on + strand, within B158DRAFT_2018 at 147.682 kb on + strand, within B158DRAFT_2018 at 147.738 kb on + strand, within B158DRAFT_2018 at 147.738 kb on + strand, within B158DRAFT_2018 at 147.746 kb on - strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.815 kb on + strand, within B158DRAFT_2018 at 147.870 kb on - strand, within B158DRAFT_2018 at 147.937 kb on - strand, within B158DRAFT_2018 at 148.016 kb on + strand, within B158DRAFT_2018 at 148.019 kb on - strand, within B158DRAFT_2018 at 148.024 kb on - strand, within B158DRAFT_2018 at 148.034 kb on - strand, within B158DRAFT_2018 at 148.080 kb on + strand, within B158DRAFT_2018 at 148.307 kb on + strand at 148.312 kb on + strand at 148.313 kb on + strand at 148.321 kb on - strand at 148.321 kb on - strand at 148.395 kb on - strand at 148.397 kb on + strand at 148.397 kb on + strand at 148.407 kb on - strand at 148.501 kb on + strand, within B158DRAFT_2019 at 148.611 kb on + strand, within B158DRAFT_2019 at 148.651 kb on - strand, within B158DRAFT_2019 at 148.658 kb on - strand, within B158DRAFT_2019 at 148.658 kb on - strand, within B158DRAFT_2019 at 148.670 kb on - strand, within B158DRAFT_2019 at 148.680 kb on - strand, within B158DRAFT_2019 at 148.804 kb on + strand, within B158DRAFT_2019 at 148.812 kb on - strand, within B158DRAFT_2019 at 148.816 kb on - strand, within B158DRAFT_2019 at 148.830 kb on + strand, within B158DRAFT_2019 at 148.914 kb on - strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.134 kb on + strand, within B158DRAFT_2019 at 149.142 kb on - strand, within B158DRAFT_2019 at 149.142 kb on - strand, within B158DRAFT_2019 at 149.142 kb on - strand, within B158DRAFT_2019 at 149.225 kb on + strand, within B158DRAFT_2019 at 149.247 kb on - strand at 149.247 kb on - strand at 149.269 kb on + strand at 149.288 kb on - strand at 149.336 kb on + strand at 149.336 kb on + strand at 149.336 kb on + strand at 149.336 kb on + strand at 149.344 kb on - strand at 149.344 kb on - strand at 149.344 kb on - strand at 149.344 kb on - strand at 149.344 kb on - strand at 149.344 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml remove 146,423 - B158DRAFT_2016 0.76 -0.1 146,435 + B158DRAFT_2016 0.77 -0.1 146,435 + B158DRAFT_2016 0.77 -0.5 146,443 - B158DRAFT_2016 0.78 -0.4 146,445 + B158DRAFT_2016 0.78 +1.1 146,453 - B158DRAFT_2016 0.79 -0.3 146,453 - B158DRAFT_2016 0.79 +0.1 146,453 - B158DRAFT_2016 0.79 +0.5 146,453 - B158DRAFT_2016 0.79 -0.6 146,453 - B158DRAFT_2016 0.79 -0.5 146,453 - B158DRAFT_2016 0.79 -0.4 146,453 - B158DRAFT_2016 0.79 +0.3 146,453 - B158DRAFT_2016 0.79 +0.2 146,453 - B158DRAFT_2016 0.79 -0.6 146,523 - B158DRAFT_2016 0.87 -0.0 146,582 - +0.3 146,692 - -0.5 146,777 + B158DRAFT_2017 0.15 -0.2 146,777 + B158DRAFT_2017 0.15 -0.3 146,777 + B158DRAFT_2017 0.15 +0.0 146,777 + B158DRAFT_2017 0.15 +0.1 146,777 + B158DRAFT_2017 0.15 +0.1 146,785 - B158DRAFT_2017 0.16 -0.8 146,785 - B158DRAFT_2017 0.16 -0.7 146,785 - B158DRAFT_2017 0.16 +0.0 146,851 + B158DRAFT_2017 0.28 -0.6 146,874 - B158DRAFT_2017 0.33 +0.2 146,881 + B158DRAFT_2017 0.34 -1.0 146,941 + B158DRAFT_2017 0.45 -0.3 146,946 + B158DRAFT_2017 0.46 -0.2 146,985 + B158DRAFT_2017 0.53 -0.1 146,988 + B158DRAFT_2017 0.54 -0.1 146,988 + B158DRAFT_2017 0.54 +0.1 146,988 + B158DRAFT_2017 0.54 -0.6 146,988 + B158DRAFT_2017 0.54 -0.6 146,996 - B158DRAFT_2017 0.55 -0.1 146,996 - B158DRAFT_2017 0.55 -0.8 146,996 - B158DRAFT_2017 0.55 -0.1 146,996 - B158DRAFT_2017 0.55 +0.2 146,996 - B158DRAFT_2017 0.55 -0.3 146,996 - B158DRAFT_2017 0.55 -0.4 146,996 - B158DRAFT_2017 0.55 +0.4 146,996 - B158DRAFT_2017 0.55 -0.4 146,996 - B158DRAFT_2017 0.55 -0.0 146,996 - B158DRAFT_2017 0.55 +0.2 146,998 + B158DRAFT_2017 0.55 -0.0 147,006 - B158DRAFT_2017 0.57 +0.2 147,008 - B158DRAFT_2017 0.57 +0.0 147,095 - B158DRAFT_2017 0.73 +0.7 147,224 + -0.2 147,232 - -0.4 147,233 - -0.2 147,248 - -1.1 147,285 - +0.1 147,340 - -0.4 147,340 - +0.1 147,391 + -0.0 147,391 + +0.7 147,392 - +0.6 147,399 - +0.5 147,399 - -0.0 147,399 - +0.2 147,424 - +0.2 147,424 - +0.4 147,426 + -0.3 147,426 + -0.1 147,431 + +0.6 147,434 - -0.2 147,434 - -0.1 147,434 - +0.1 147,434 - +0.4 147,434 - -0.5 147,434 - +0.4 147,440 + +0.7 147,475 - +0.6 147,475 - -0.2 147,482 - +0.2 147,483 + +0.3 147,483 + +0.1 147,483 + +0.1 147,483 + +0.5 147,483 + +0.2 147,483 + +0.2 147,491 - +0.2 147,491 - +0.1 147,491 - +0.5 147,491 - +0.1 147,491 - +0.1 147,522 + B158DRAFT_2018 0.11 +0.3 147,574 + B158DRAFT_2018 0.16 +0.0 147,574 + B158DRAFT_2018 0.16 +0.2 147,624 - B158DRAFT_2018 0.21 +0.6 147,668 + B158DRAFT_2018 0.26 +0.4 147,682 + B158DRAFT_2018 0.27 +0.3 147,738 + B158DRAFT_2018 0.33 +0.2 147,738 + B158DRAFT_2018 0.33 +0.1 147,746 - B158DRAFT_2018 0.34 +0.3 147,815 + B158DRAFT_2018 0.41 +0.1 147,815 + B158DRAFT_2018 0.41 +0.7 147,815 + B158DRAFT_2018 0.41 +0.4 147,870 - B158DRAFT_2018 0.47 +0.2 147,937 - B158DRAFT_2018 0.54 +0.3 148,016 + B158DRAFT_2018 0.62 +0.1 148,019 - B158DRAFT_2018 0.62 +0.4 148,024 - B158DRAFT_2018 0.63 +0.0 148,034 - B158DRAFT_2018 0.64 -0.0 148,080 + B158DRAFT_2018 0.69 -0.0 148,307 + -0.2 148,312 + -0.1 148,313 + -0.0 148,321 - -0.1 148,321 - +0.1 148,395 - -0.3 148,397 + -1.1 148,397 + -0.3 148,407 - -0.7 148,501 + B158DRAFT_2019 0.16 -1.0 148,611 + B158DRAFT_2019 0.27 -0.2 148,651 - B158DRAFT_2019 0.31 +0.0 148,658 - B158DRAFT_2019 0.32 -0.7 148,658 - B158DRAFT_2019 0.32 -0.2 148,670 - B158DRAFT_2019 0.33 -0.5 148,680 - B158DRAFT_2019 0.34 -0.6 148,804 + B158DRAFT_2019 0.47 -0.4 148,812 - B158DRAFT_2019 0.48 -0.2 148,816 - B158DRAFT_2019 0.48 -0.0 148,830 + B158DRAFT_2019 0.49 -1.3 148,914 - B158DRAFT_2019 0.58 +0.1 149,134 + B158DRAFT_2019 0.80 +0.0 149,134 + B158DRAFT_2019 0.80 -0.3 149,134 + B158DRAFT_2019 0.80 -0.3 149,134 + B158DRAFT_2019 0.80 -0.2 149,134 + B158DRAFT_2019 0.80 -0.0 149,134 + B158DRAFT_2019 0.80 +0.5 149,142 - B158DRAFT_2019 0.81 -0.4 149,142 - B158DRAFT_2019 0.81 -0.5 149,142 - B158DRAFT_2019 0.81 +0.1 149,225 + B158DRAFT_2019 0.90 -0.1 149,247 - -0.2 149,247 - -0.5 149,269 + +1.0 149,288 - -0.4 149,336 + -0.1 149,336 + +0.2 149,336 + +0.1 149,336 + -0.3 149,344 - -0.2 149,344 - +0.0 149,344 - -0.3 149,344 - -0.2 149,344 - -0.2 149,344 - -1.1
Or see this region's nucleotide sequence