Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1191

Experiment: m.b. Rifampicin 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1190 and B158DRAFT_1191 are separated by 310 nucleotidesB158DRAFT_1191 and B158DRAFT_1192 are separated by 131 nucleotides B158DRAFT_1190: B158DRAFT_1190 - hypothetical protein, at 1,228,223 to 1,230,346 _1190 B158DRAFT_1191: B158DRAFT_1191 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 1,230,657 to 1,231,277 _1191 B158DRAFT_1192: B158DRAFT_1192 - DNA recombination-dependent growth factor C, at 1,231,409 to 1,232,377 _1192 Position (kb) 1230 1231 1232Strain fitness (log2 ratio) -1 0 1 2 3at 1229.662 kb on - strand, within B158DRAFT_1190at 1229.662 kb on - strand, within B158DRAFT_1190at 1229.662 kb on - strand, within B158DRAFT_1190at 1229.662 kb on - strand, within B158DRAFT_1190at 1229.695 kb on + strand, within B158DRAFT_1190at 1229.696 kb on + strand, within B158DRAFT_1190at 1229.704 kb on - strand, within B158DRAFT_1190at 1229.724 kb on + strand, within B158DRAFT_1190at 1229.807 kb on + strand, within B158DRAFT_1190at 1229.832 kb on + strand, within B158DRAFT_1190at 1229.912 kb on - strand, within B158DRAFT_1190at 1229.973 kb on - strand, within B158DRAFT_1190at 1229.998 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.016 kb on + strand, within B158DRAFT_1190at 1230.021 kb on + strand, within B158DRAFT_1190at 1230.024 kb on - strand, within B158DRAFT_1190at 1230.024 kb on - strand, within B158DRAFT_1190at 1230.024 kb on - strand, within B158DRAFT_1190at 1230.024 kb on - strand, within B158DRAFT_1190at 1230.024 kb on - strand, within B158DRAFT_1190at 1230.045 kb on + strand, within B158DRAFT_1190at 1230.046 kb on + strand, within B158DRAFT_1190at 1230.046 kb on + strand, within B158DRAFT_1190at 1230.046 kb on + strand, within B158DRAFT_1190at 1230.046 kb on + strand, within B158DRAFT_1190at 1230.052 kb on + strand, within B158DRAFT_1190at 1230.054 kb on - strand, within B158DRAFT_1190at 1230.054 kb on - strand, within B158DRAFT_1190at 1230.084 kb on + strand, within B158DRAFT_1190at 1230.089 kb on + strand, within B158DRAFT_1190at 1230.092 kb on - strand, within B158DRAFT_1190at 1230.097 kb on - strand, within B158DRAFT_1190at 1230.097 kb on - strand, within B158DRAFT_1190at 1230.149 kb on + strandat 1230.149 kb on + strandat 1230.150 kb on + strandat 1230.150 kb on + strandat 1230.165 kb on + strandat 1230.279 kb on + strandat 1230.283 kb on - strandat 1230.340 kb on + strandat 1230.340 kb on + strandat 1230.348 kb on - strandat 1230.348 kb on - strandat 1230.406 kb on + strandat 1230.414 kb on - strandat 1230.416 kb on + strandat 1230.498 kb on + strandat 1230.508 kb on - strandat 1230.525 kb on + strandat 1230.542 kb on + strandat 1230.601 kb on - strandat 1230.645 kb on + strandat 1230.653 kb on - strandat 1230.653 kb on - strandat 1230.653 kb on - strandat 1230.680 kb on - strandat 1230.698 kb on - strandat 1230.792 kb on + strand, within B158DRAFT_1191at 1230.818 kb on - strand, within B158DRAFT_1191at 1230.865 kb on - strand, within B158DRAFT_1191at 1230.865 kb on - strand, within B158DRAFT_1191at 1230.865 kb on - strand, within B158DRAFT_1191at 1230.888 kb on - strand, within B158DRAFT_1191at 1230.915 kb on - strand, within B158DRAFT_1191at 1230.922 kb on - strand, within B158DRAFT_1191at 1231.078 kb on - strand, within B158DRAFT_1191at 1231.102 kb on + strand, within B158DRAFT_1191at 1231.110 kb on - strand, within B158DRAFT_1191at 1231.110 kb on - strand, within B158DRAFT_1191at 1231.110 kb on - strand, within B158DRAFT_1191at 1231.110 kb on - strand, within B158DRAFT_1191at 1231.131 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.198 kb on + strand, within B158DRAFT_1191at 1231.205 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.206 kb on - strand, within B158DRAFT_1191at 1231.223 kb on + strandat 1231.223 kb on + strandat 1231.223 kb on + strandat 1231.263 kb on + strandat 1231.263 kb on + strandat 1231.398 kb on - strandat 1231.398 kb on - strandat 1231.400 kb on + strandat 1231.400 kb on + strandat 1231.400 kb on + strandat 1231.400 kb on + strandat 1231.400 kb on + strandat 1231.408 kb on - strandat 1231.408 kb on - strandat 1231.408 kb on - strandat 1231.408 kb on - strandat 1231.408 kb on - strandat 1231.408 kb on - strandat 1231.466 kb on + strandat 1231.501 kb on + strandat 1231.509 kb on - strand, within B158DRAFT_1192at 1231.509 kb on - strand, within B158DRAFT_1192at 1231.509 kb on - strand, within B158DRAFT_1192at 1231.512 kb on - strand, within B158DRAFT_1192at 1231.522 kb on - strand, within B158DRAFT_1192at 1231.522 kb on - strand, within B158DRAFT_1192at 1231.524 kb on + strand, within B158DRAFT_1192at 1231.524 kb on + strand, within B158DRAFT_1192at 1231.524 kb on + strand, within B158DRAFT_1192at 1231.524 kb on + strand, within B158DRAFT_1192at 1231.524 kb on + strand, within B158DRAFT_1192at 1231.532 kb on - strand, within B158DRAFT_1192at 1231.532 kb on - strand, within B158DRAFT_1192at 1231.534 kb on - strand, within B158DRAFT_1192at 1231.534 kb on - strand, within B158DRAFT_1192at 1231.582 kb on + strand, within B158DRAFT_1192at 1231.593 kb on + strand, within B158DRAFT_1192at 1231.601 kb on - strand, within B158DRAFT_1192at 1231.631 kb on + strand, within B158DRAFT_1192at 1231.639 kb on - strand, within B158DRAFT_1192at 1231.639 kb on - strand, within B158DRAFT_1192at 1231.654 kb on - strand, within B158DRAFT_1192at 1231.654 kb on - strand, within B158DRAFT_1192at 1231.658 kb on + strand, within B158DRAFT_1192at 1231.658 kb on + strand, within B158DRAFT_1192at 1231.666 kb on - strand, within B158DRAFT_1192at 1231.716 kb on + strand, within B158DRAFT_1192at 1231.716 kb on + strand, within B158DRAFT_1192at 1231.724 kb on - strand, within B158DRAFT_1192at 1231.724 kb on - strand, within B158DRAFT_1192at 1231.744 kb on + strand, within B158DRAFT_1192at 1231.744 kb on + strand, within B158DRAFT_1192at 1231.763 kb on + strand, within B158DRAFT_1192at 1231.774 kb on + strand, within B158DRAFT_1192at 1231.787 kb on - strand, within B158DRAFT_1192at 1231.807 kb on - strand, within B158DRAFT_1192at 1231.810 kb on + strand, within B158DRAFT_1192at 1231.816 kb on + strand, within B158DRAFT_1192at 1231.831 kb on - strand, within B158DRAFT_1192at 1231.833 kb on + strand, within B158DRAFT_1192at 1231.852 kb on - strand, within B158DRAFT_1192at 1231.863 kb on - strand, within B158DRAFT_1192at 1231.892 kb on + strand, within B158DRAFT_1192at 1231.914 kb on + strand, within B158DRAFT_1192at 1231.914 kb on + strand, within B158DRAFT_1192at 1231.914 kb on + strand, within B158DRAFT_1192at 1231.922 kb on - strand, within B158DRAFT_1192at 1231.922 kb on - strand, within B158DRAFT_1192at 1231.938 kb on - strand, within B158DRAFT_1192at 1231.961 kb on + strand, within B158DRAFT_1192at 1231.970 kb on + strand, within B158DRAFT_1192at 1231.978 kb on - strand, within B158DRAFT_1192at 1231.983 kb on - strand, within B158DRAFT_1192at 1231.999 kb on - strand, within B158DRAFT_1192at 1232.004 kb on + strand, within B158DRAFT_1192at 1232.014 kb on + strand, within B158DRAFT_1192at 1232.014 kb on + strand, within B158DRAFT_1192at 1232.022 kb on - strand, within B158DRAFT_1192at 1232.040 kb on - strand, within B158DRAFT_1192at 1232.103 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.104 kb on + strand, within B158DRAFT_1192at 1232.111 kb on + strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.112 kb on - strand, within B158DRAFT_1192at 1232.173 kb on + strand, within B158DRAFT_1192at 1232.207 kb on - strand, within B158DRAFT_1192

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml
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1,229,662 - B158DRAFT_1190 0.68 -0.0
1,229,662 - B158DRAFT_1190 0.68 -0.3
1,229,662 - B158DRAFT_1190 0.68 -0.4
1,229,662 - B158DRAFT_1190 0.68 -0.4
1,229,695 + B158DRAFT_1190 0.69 +0.5
1,229,696 + B158DRAFT_1190 0.69 +1.1
1,229,704 - B158DRAFT_1190 0.70 -0.0
1,229,724 + B158DRAFT_1190 0.71 -0.3
1,229,807 + B158DRAFT_1190 0.75 -0.3
1,229,832 + B158DRAFT_1190 0.76 +0.1
1,229,912 - B158DRAFT_1190 0.80 -0.6
1,229,973 - B158DRAFT_1190 0.82 -0.2
1,229,998 + B158DRAFT_1190 0.84 -0.2
1,230,016 + B158DRAFT_1190 0.84 -0.6
1,230,016 + B158DRAFT_1190 0.84 -0.0
1,230,016 + B158DRAFT_1190 0.84 -0.1
1,230,016 + B158DRAFT_1190 0.84 -0.4
1,230,016 + B158DRAFT_1190 0.84 -0.1
1,230,016 + B158DRAFT_1190 0.84 -0.3
1,230,016 + B158DRAFT_1190 0.84 -0.4
1,230,021 + B158DRAFT_1190 0.85 -0.2
1,230,024 - B158DRAFT_1190 0.85 -0.1
1,230,024 - B158DRAFT_1190 0.85 -0.1
1,230,024 - B158DRAFT_1190 0.85 -0.4
1,230,024 - B158DRAFT_1190 0.85 -0.3
1,230,024 - B158DRAFT_1190 0.85 -0.2
1,230,045 + B158DRAFT_1190 0.86 +0.3
1,230,046 + B158DRAFT_1190 0.86 -0.4
1,230,046 + B158DRAFT_1190 0.86 -0.2
1,230,046 + B158DRAFT_1190 0.86 +0.0
1,230,046 + B158DRAFT_1190 0.86 -0.1
1,230,052 + B158DRAFT_1190 0.86 +0.4
1,230,054 - B158DRAFT_1190 0.86 -0.6
1,230,054 - B158DRAFT_1190 0.86 +0.3
1,230,084 + B158DRAFT_1190 0.88 -0.2
1,230,089 + B158DRAFT_1190 0.88 +0.6
1,230,092 - B158DRAFT_1190 0.88 -0.5
1,230,097 - B158DRAFT_1190 0.88 +0.7
1,230,097 - B158DRAFT_1190 0.88 -0.3
1,230,149 + -0.1
1,230,149 + +0.8
1,230,150 + -0.2
1,230,150 + -0.6
1,230,165 + +0.0
1,230,279 + +0.4
1,230,283 - -0.3
1,230,340 + -0.3
1,230,340 + -0.7
1,230,348 - -0.1
1,230,348 - -0.4
1,230,406 + -0.9
1,230,414 - +0.3
1,230,416 + -0.1
1,230,498 + -0.3
1,230,508 - -0.6
1,230,525 + +0.5
1,230,542 + -0.4
1,230,601 - -0.0
1,230,645 + -0.5
1,230,653 - -0.1
1,230,653 - -0.2
1,230,653 - -0.2
1,230,680 - +0.6
1,230,698 - -0.2
1,230,792 + B158DRAFT_1191 0.22 -0.0
1,230,818 - B158DRAFT_1191 0.26 +0.1
1,230,865 - B158DRAFT_1191 0.33 -0.1
1,230,865 - B158DRAFT_1191 0.33 -0.4
1,230,865 - B158DRAFT_1191 0.33 +0.1
1,230,888 - B158DRAFT_1191 0.37 +0.2
1,230,915 - B158DRAFT_1191 0.42 -0.3
1,230,922 - B158DRAFT_1191 0.43 -0.2
1,231,078 - B158DRAFT_1191 0.68 -0.4
1,231,102 + B158DRAFT_1191 0.72 -0.3
1,231,110 - B158DRAFT_1191 0.73 -0.1
1,231,110 - B158DRAFT_1191 0.73 -0.4
1,231,110 - B158DRAFT_1191 0.73 +0.3
1,231,110 - B158DRAFT_1191 0.73 -0.7
1,231,131 + B158DRAFT_1191 0.76 -0.3
1,231,198 + B158DRAFT_1191 0.87 -0.3
1,231,198 + B158DRAFT_1191 0.87 -0.4
1,231,198 + B158DRAFT_1191 0.87 -0.3
1,231,198 + B158DRAFT_1191 0.87 -0.2
1,231,198 + B158DRAFT_1191 0.87 -0.6
1,231,198 + B158DRAFT_1191 0.87 -0.2
1,231,205 - B158DRAFT_1191 0.88 -0.1
1,231,206 - B158DRAFT_1191 0.88 -0.3
1,231,206 - B158DRAFT_1191 0.88 -0.3
1,231,206 - B158DRAFT_1191 0.88 -0.3
1,231,206 - B158DRAFT_1191 0.88 -0.5
1,231,206 - B158DRAFT_1191 0.88 -0.3
1,231,206 - B158DRAFT_1191 0.88 -0.4
1,231,223 + -0.0
1,231,223 + -0.1
1,231,223 + -0.2
1,231,263 + +0.0
1,231,263 + -0.2
1,231,398 - -0.4
1,231,398 - -0.2
1,231,400 + -0.5
1,231,400 + -0.0
1,231,400 + +0.5
1,231,400 + +0.3
1,231,400 + -0.5
1,231,408 - +0.4
1,231,408 - +0.0
1,231,408 - -1.0
1,231,408 - -0.2
1,231,408 - -0.4
1,231,408 - -0.5
1,231,466 + -0.2
1,231,501 + +0.6
1,231,509 - B158DRAFT_1192 0.10 +0.6
1,231,509 - B158DRAFT_1192 0.10 +0.3
1,231,509 - B158DRAFT_1192 0.10 +0.8
1,231,512 - B158DRAFT_1192 0.11 +0.9
1,231,522 - B158DRAFT_1192 0.12 +0.1
1,231,522 - B158DRAFT_1192 0.12 +0.7
1,231,524 + B158DRAFT_1192 0.12 -1.1
1,231,524 + B158DRAFT_1192 0.12 -0.6
1,231,524 + B158DRAFT_1192 0.12 -0.5
1,231,524 + B158DRAFT_1192 0.12 -0.7
1,231,524 + B158DRAFT_1192 0.12 -0.5
1,231,532 - B158DRAFT_1192 0.13 +0.4
1,231,532 - B158DRAFT_1192 0.13 +1.0
1,231,534 - B158DRAFT_1192 0.13 +0.3
1,231,534 - B158DRAFT_1192 0.13 +0.4
1,231,582 + B158DRAFT_1192 0.18 +0.2
1,231,593 + B158DRAFT_1192 0.19 -0.4
1,231,601 - B158DRAFT_1192 0.20 +0.1
1,231,631 + B158DRAFT_1192 0.23 +0.4
1,231,639 - B158DRAFT_1192 0.24 +0.9
1,231,639 - B158DRAFT_1192 0.24 +0.4
1,231,654 - B158DRAFT_1192 0.25 -0.1
1,231,654 - B158DRAFT_1192 0.25 +0.0
1,231,658 + B158DRAFT_1192 0.26 -0.6
1,231,658 + B158DRAFT_1192 0.26 -0.9
1,231,666 - B158DRAFT_1192 0.27 +0.2
1,231,716 + B158DRAFT_1192 0.32 -0.4
1,231,716 + B158DRAFT_1192 0.32 +0.1
1,231,724 - B158DRAFT_1192 0.33 +0.5
1,231,724 - B158DRAFT_1192 0.33 +0.4
1,231,744 + B158DRAFT_1192 0.35 -0.4
1,231,744 + B158DRAFT_1192 0.35 -0.4
1,231,763 + B158DRAFT_1192 0.37 -0.3
1,231,774 + B158DRAFT_1192 0.38 -0.5
1,231,787 - B158DRAFT_1192 0.39 -0.0
1,231,807 - B158DRAFT_1192 0.41 +0.7
1,231,810 + B158DRAFT_1192 0.41 -0.5
1,231,816 + B158DRAFT_1192 0.42 -0.4
1,231,831 - B158DRAFT_1192 0.44 +0.4
1,231,833 + B158DRAFT_1192 0.44 +0.6
1,231,852 - B158DRAFT_1192 0.46 +0.3
1,231,863 - B158DRAFT_1192 0.47 +0.2
1,231,892 + B158DRAFT_1192 0.50 -0.7
1,231,914 + B158DRAFT_1192 0.52 +0.0
1,231,914 + B158DRAFT_1192 0.52 -0.3
1,231,914 + B158DRAFT_1192 0.52 +0.3
1,231,922 - B158DRAFT_1192 0.53 +0.4
1,231,922 - B158DRAFT_1192 0.53 +0.3
1,231,938 - B158DRAFT_1192 0.55 +1.1
1,231,961 + B158DRAFT_1192 0.57 +0.1
1,231,970 + B158DRAFT_1192 0.58 -0.1
1,231,978 - B158DRAFT_1192 0.59 +0.5
1,231,983 - B158DRAFT_1192 0.59 +0.8
1,231,999 - B158DRAFT_1192 0.61 +0.3
1,232,004 + B158DRAFT_1192 0.61 -0.0
1,232,014 + B158DRAFT_1192 0.62 +1.6
1,232,014 + B158DRAFT_1192 0.62 -0.1
1,232,022 - B158DRAFT_1192 0.63 +0.3
1,232,040 - B158DRAFT_1192 0.65 +1.1
1,232,103 + B158DRAFT_1192 0.72 -0.1
1,232,104 + B158DRAFT_1192 0.72 -0.3
1,232,104 + B158DRAFT_1192 0.72 -1.2
1,232,104 + B158DRAFT_1192 0.72 -0.1
1,232,104 + B158DRAFT_1192 0.72 -0.2
1,232,104 + B158DRAFT_1192 0.72 +0.1
1,232,104 + B158DRAFT_1192 0.72 -0.2
1,232,111 + B158DRAFT_1192 0.72 +0.1
1,232,112 - B158DRAFT_1192 0.73 +0.3
1,232,112 - B158DRAFT_1192 0.73 +0.4
1,232,112 - B158DRAFT_1192 0.73 +0.3
1,232,112 - B158DRAFT_1192 0.73 +0.9
1,232,112 - B158DRAFT_1192 0.73 +0.3
1,232,112 - B158DRAFT_1192 0.73 +0.1
1,232,112 - B158DRAFT_1192 0.73 +0.2
1,232,112 - B158DRAFT_1192 0.73 +0.5
1,232,112 - B158DRAFT_1192 0.73 +0.9
1,232,173 + B158DRAFT_1192 0.79 -0.3
1,232,207 - B158DRAFT_1192 0.82 +2.9

Or see this region's nucleotide sequence