Experiment: m.b. Rifampicin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1043 and B158DRAFT_1044 overlap by 1 nucleotides B158DRAFT_1044 and B158DRAFT_1045 are separated by 4 nucleotides B158DRAFT_1045 and B158DRAFT_1046 overlap by 4 nucleotides B158DRAFT_1046 and B158DRAFT_1047 overlap by 1 nucleotides
B158DRAFT_1043: B158DRAFT_1043 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 1,082,145 to 1,082,933
_1043
B158DRAFT_1044: B158DRAFT_1044 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 1,082,933 to 1,083,913
_1044
B158DRAFT_1045: B158DRAFT_1045 - ABC-type antimicrobial peptide transport system, permease component, at 1,083,918 to 1,084,781
_1045
B158DRAFT_1046: B158DRAFT_1046 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 1,084,778 to 1,085,737
_1046
B158DRAFT_1047: B158DRAFT_1047 - ABC-type dipeptide transport system, periplasmic component, at 1,085,737 to 1,087,395
_1047
Position (kb)
1083
1084
1085 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6 at 1082.974 kb on + strand at 1082.998 kb on + strand at 1082.998 kb on + strand at 1083.006 kb on - strand at 1083.006 kb on - strand at 1083.035 kb on - strand, within B158DRAFT_1044 at 1083.043 kb on + strand, within B158DRAFT_1044 at 1083.051 kb on - strand, within B158DRAFT_1044 at 1083.068 kb on - strand, within B158DRAFT_1044 at 1083.095 kb on - strand, within B158DRAFT_1044 at 1083.097 kb on + strand, within B158DRAFT_1044 at 1083.182 kb on - strand, within B158DRAFT_1044 at 1083.202 kb on - strand, within B158DRAFT_1044 at 1083.275 kb on + strand, within B158DRAFT_1044 at 1083.298 kb on - strand, within B158DRAFT_1044 at 1083.298 kb on - strand, within B158DRAFT_1044 at 1083.377 kb on - strand, within B158DRAFT_1044 at 1083.397 kb on - strand, within B158DRAFT_1044 at 1083.407 kb on + strand, within B158DRAFT_1044 at 1083.529 kb on + strand, within B158DRAFT_1044 at 1083.691 kb on + strand, within B158DRAFT_1044 at 1083.699 kb on - strand, within B158DRAFT_1044 at 1083.766 kb on + strand, within B158DRAFT_1044 at 1083.766 kb on - strand, within B158DRAFT_1044 at 1083.773 kb on + strand, within B158DRAFT_1044 at 1083.781 kb on - strand, within B158DRAFT_1044 at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.849 kb on + strand at 1083.857 kb on - strand at 1083.857 kb on - strand at 1083.857 kb on - strand at 1083.857 kb on - strand at 1083.857 kb on - strand at 1083.857 kb on - strand at 1083.862 kb on - strand at 1083.862 kb on - strand at 1083.862 kb on - strand at 1083.878 kb on - strand at 1083.917 kb on - strand at 1083.932 kb on - strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.935 kb on + strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.943 kb on - strand at 1083.958 kb on + strand at 1084.012 kb on + strand, within B158DRAFT_1045 at 1084.020 kb on - strand, within B158DRAFT_1045 at 1084.042 kb on - strand, within B158DRAFT_1045 at 1084.093 kb on - strand, within B158DRAFT_1045 at 1084.130 kb on - strand, within B158DRAFT_1045 at 1084.130 kb on - strand, within B158DRAFT_1045 at 1084.180 kb on - strand, within B158DRAFT_1045 at 1084.217 kb on - strand, within B158DRAFT_1045 at 1084.242 kb on + strand, within B158DRAFT_1045 at 1084.330 kb on + strand, within B158DRAFT_1045 at 1084.330 kb on + strand, within B158DRAFT_1045 at 1084.330 kb on + strand, within B158DRAFT_1045 at 1084.330 kb on + strand, within B158DRAFT_1045 at 1084.335 kb on + strand, within B158DRAFT_1045 at 1084.335 kb on + strand, within B158DRAFT_1045 at 1084.335 kb on + strand, within B158DRAFT_1045 at 1084.335 kb on + strand, within B158DRAFT_1045 at 1084.335 kb on + strand, within B158DRAFT_1045 at 1084.340 kb on + strand, within B158DRAFT_1045 at 1084.343 kb on - strand, within B158DRAFT_1045 at 1084.343 kb on - strand, within B158DRAFT_1045 at 1084.343 kb on - strand, within B158DRAFT_1045 at 1084.348 kb on - strand, within B158DRAFT_1045 at 1084.348 kb on - strand, within B158DRAFT_1045 at 1084.421 kb on + strand, within B158DRAFT_1045 at 1084.428 kb on + strand, within B158DRAFT_1045 at 1084.428 kb on + strand, within B158DRAFT_1045 at 1084.555 kb on + strand, within B158DRAFT_1045 at 1084.555 kb on + strand, within B158DRAFT_1045 at 1084.651 kb on + strand, within B158DRAFT_1045 at 1084.765 kb on + strand at 1084.765 kb on + strand at 1084.765 kb on + strand at 1084.765 kb on + strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.773 kb on - strand at 1084.938 kb on - strand, within B158DRAFT_1046 at 1084.964 kb on - strand, within B158DRAFT_1046 at 1084.966 kb on + strand, within B158DRAFT_1046 at 1084.966 kb on + strand, within B158DRAFT_1046 at 1084.974 kb on - strand, within B158DRAFT_1046 at 1084.980 kb on + strand, within B158DRAFT_1046 at 1084.988 kb on - strand, within B158DRAFT_1046 at 1085.035 kb on + strand, within B158DRAFT_1046 at 1085.082 kb on + strand, within B158DRAFT_1046 at 1085.090 kb on - strand, within B158DRAFT_1046 at 1085.097 kb on + strand, within B158DRAFT_1046 at 1085.098 kb on - strand, within B158DRAFT_1046 at 1085.105 kb on - strand, within B158DRAFT_1046 at 1085.109 kb on + strand, within B158DRAFT_1046 at 1085.179 kb on + strand, within B158DRAFT_1046 at 1085.179 kb on + strand, within B158DRAFT_1046 at 1085.187 kb on - strand, within B158DRAFT_1046 at 1085.192 kb on - strand, within B158DRAFT_1046 at 1085.380 kb on - strand, within B158DRAFT_1046 at 1085.386 kb on + strand, within B158DRAFT_1046 at 1085.394 kb on - strand, within B158DRAFT_1046 at 1085.401 kb on + strand, within B158DRAFT_1046 at 1085.474 kb on + strand, within B158DRAFT_1046 at 1085.494 kb on + strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.502 kb on - strand, within B158DRAFT_1046 at 1085.513 kb on - strand, within B158DRAFT_1046 at 1085.525 kb on + strand, within B158DRAFT_1046 at 1085.538 kb on + strand, within B158DRAFT_1046 at 1085.538 kb on + strand, within B158DRAFT_1046 at 1085.543 kb on + strand, within B158DRAFT_1046 at 1085.543 kb on + strand, within B158DRAFT_1046 at 1085.551 kb on - strand, within B158DRAFT_1046 at 1085.572 kb on - strand, within B158DRAFT_1046 at 1085.600 kb on + strand, within B158DRAFT_1046 at 1085.623 kb on - strand, within B158DRAFT_1046 at 1085.662 kb on + strand at 1085.670 kb on - strand at 1085.670 kb on - strand at 1085.670 kb on - strand at 1085.714 kb on - strand at 1085.751 kb on + strand at 1085.762 kb on + strand at 1085.770 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml remove 1,082,974 + +4.6 1,082,998 + +3.6 1,082,998 + +4.6 1,083,006 - +4.9 1,083,006 - +4.9 1,083,035 - B158DRAFT_1044 0.10 +4.9 1,083,043 + B158DRAFT_1044 0.11 +4.6 1,083,051 - B158DRAFT_1044 0.12 +4.6 1,083,068 - B158DRAFT_1044 0.14 +4.8 1,083,095 - B158DRAFT_1044 0.17 +3.9 1,083,097 + B158DRAFT_1044 0.17 +4.6 1,083,182 - B158DRAFT_1044 0.25 +4.9 1,083,202 - B158DRAFT_1044 0.27 +4.3 1,083,275 + B158DRAFT_1044 0.35 +4.2 1,083,298 - B158DRAFT_1044 0.37 +4.4 1,083,298 - B158DRAFT_1044 0.37 +4.4 1,083,377 - B158DRAFT_1044 0.45 +4.4 1,083,397 - B158DRAFT_1044 0.47 +5.0 1,083,407 + B158DRAFT_1044 0.48 +4.4 1,083,529 + B158DRAFT_1044 0.61 +4.9 1,083,691 + B158DRAFT_1044 0.77 +3.8 1,083,699 - B158DRAFT_1044 0.78 +4.1 1,083,766 + B158DRAFT_1044 0.85 +4.7 1,083,766 - B158DRAFT_1044 0.85 +5.1 1,083,773 + B158DRAFT_1044 0.86 +5.7 1,083,781 - B158DRAFT_1044 0.86 +5.2 1,083,849 + +4.7 1,083,849 + +5.1 1,083,849 + +4.5 1,083,849 + +5.4 1,083,849 + +4.7 1,083,849 + +4.5 1,083,849 + +4.1 1,083,849 + +3.9 1,083,857 - +4.4 1,083,857 - +4.6 1,083,857 - +4.6 1,083,857 - +6.3 1,083,857 - +4.9 1,083,857 - +4.9 1,083,862 - +5.0 1,083,862 - +4.8 1,083,862 - +4.5 1,083,878 - +4.4 1,083,917 - +0.0 1,083,932 - +2.1 1,083,935 + +4.9 1,083,935 + +4.8 1,083,935 + +5.1 1,083,935 + +4.3 1,083,935 + +4.2 1,083,935 + +5.3 1,083,935 + +4.9 1,083,935 + +5.1 1,083,943 - +1.2 1,083,943 - +1.0 1,083,943 - +1.3 1,083,943 - +0.9 1,083,943 - +1.1 1,083,943 - +1.1 1,083,943 - +1.2 1,083,943 - +1.1 1,083,943 - +0.9 1,083,943 - +0.9 1,083,943 - +1.5 1,083,943 - +1.3 1,083,943 - +1.0 1,083,943 - +1.2 1,083,943 - +1.0 1,083,943 - +1.0 1,083,958 + +4.5 1,084,012 + B158DRAFT_1045 0.11 +5.2 1,084,020 - B158DRAFT_1045 0.12 +3.7 1,084,042 - B158DRAFT_1045 0.14 +3.5 1,084,093 - B158DRAFT_1045 0.20 +4.2 1,084,130 - B158DRAFT_1045 0.25 +5.0 1,084,130 - B158DRAFT_1045 0.25 +5.1 1,084,180 - B158DRAFT_1045 0.30 +4.1 1,084,217 - B158DRAFT_1045 0.35 +3.8 1,084,242 + B158DRAFT_1045 0.38 +5.0 1,084,330 + B158DRAFT_1045 0.48 +4.2 1,084,330 + B158DRAFT_1045 0.48 +4.9 1,084,330 + B158DRAFT_1045 0.48 +3.9 1,084,330 + B158DRAFT_1045 0.48 +4.8 1,084,335 + B158DRAFT_1045 0.48 +4.2 1,084,335 + B158DRAFT_1045 0.48 +5.0 1,084,335 + B158DRAFT_1045 0.48 +5.0 1,084,335 + B158DRAFT_1045 0.48 +4.1 1,084,335 + B158DRAFT_1045 0.48 +5.1 1,084,340 + B158DRAFT_1045 0.49 +5.1 1,084,343 - B158DRAFT_1045 0.49 +5.0 1,084,343 - B158DRAFT_1045 0.49 +4.7 1,084,343 - B158DRAFT_1045 0.49 +5.1 1,084,348 - B158DRAFT_1045 0.50 +4.2 1,084,348 - B158DRAFT_1045 0.50 +4.9 1,084,421 + B158DRAFT_1045 0.58 +4.4 1,084,428 + B158DRAFT_1045 0.59 +4.6 1,084,428 + B158DRAFT_1045 0.59 +5.0 1,084,555 + B158DRAFT_1045 0.74 +4.6 1,084,555 + B158DRAFT_1045 0.74 +4.5 1,084,651 + B158DRAFT_1045 0.85 +5.4 1,084,765 + +4.6 1,084,765 + +4.8 1,084,765 + +4.4 1,084,765 + +4.3 1,084,773 - +1.5 1,084,773 - +1.9 1,084,773 - +2.0 1,084,773 - +1.3 1,084,773 - +1.0 1,084,773 - +1.0 1,084,773 - +2.4 1,084,773 - +4.6 1,084,773 - +1.5 1,084,938 - B158DRAFT_1046 0.17 +5.2 1,084,964 - B158DRAFT_1046 0.19 +4.8 1,084,966 + B158DRAFT_1046 0.20 +5.6 1,084,966 + B158DRAFT_1046 0.20 +5.2 1,084,974 - B158DRAFT_1046 0.20 +4.8 1,084,980 + B158DRAFT_1046 0.21 +5.0 1,084,988 - B158DRAFT_1046 0.22 +5.3 1,085,035 + B158DRAFT_1046 0.27 +4.8 1,085,082 + B158DRAFT_1046 0.32 +5.1 1,085,090 - B158DRAFT_1046 0.33 +6.1 1,085,097 + B158DRAFT_1046 0.33 +4.2 1,085,098 - B158DRAFT_1046 0.33 +4.7 1,085,105 - B158DRAFT_1046 0.34 +5.2 1,085,109 + B158DRAFT_1046 0.34 +4.6 1,085,179 + B158DRAFT_1046 0.42 +4.7 1,085,179 + B158DRAFT_1046 0.42 +4.7 1,085,187 - B158DRAFT_1046 0.43 +4.7 1,085,192 - B158DRAFT_1046 0.43 +5.6 1,085,380 - B158DRAFT_1046 0.63 +3.9 1,085,386 + B158DRAFT_1046 0.63 +4.4 1,085,394 - B158DRAFT_1046 0.64 +5.0 1,085,401 + B158DRAFT_1046 0.65 +4.5 1,085,474 + B158DRAFT_1046 0.72 +4.8 1,085,494 + B158DRAFT_1046 0.75 +4.1 1,085,502 - B158DRAFT_1046 0.75 +4.6 1,085,502 - B158DRAFT_1046 0.75 +4.8 1,085,502 - B158DRAFT_1046 0.75 +4.8 1,085,502 - B158DRAFT_1046 0.75 +4.5 1,085,502 - B158DRAFT_1046 0.75 +4.4 1,085,502 - B158DRAFT_1046 0.75 +4.4 1,085,502 - B158DRAFT_1046 0.75 +5.5 1,085,513 - B158DRAFT_1046 0.77 +4.3 1,085,525 + B158DRAFT_1046 0.78 +3.6 1,085,538 + B158DRAFT_1046 0.79 +6.6 1,085,538 + B158DRAFT_1046 0.79 +5.3 1,085,543 + B158DRAFT_1046 0.80 +4.3 1,085,543 + B158DRAFT_1046 0.80 +4.4 1,085,551 - B158DRAFT_1046 0.81 +3.6 1,085,572 - B158DRAFT_1046 0.83 +3.7 1,085,600 + B158DRAFT_1046 0.86 +5.1 1,085,623 - B158DRAFT_1046 0.88 +1.9 1,085,662 + +4.2 1,085,670 - +2.4 1,085,670 - +2.3 1,085,670 - +1.9 1,085,714 - +1.2 1,085,751 + +4.8 1,085,762 + +4.7 1,085,770 - +0.2
Or see this region's nucleotide sequence