Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0432

Experiment: m.b. Rifampicin 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0431 and B158DRAFT_0432 are separated by 9 nucleotidesB158DRAFT_0432 and B158DRAFT_0433 overlap by 1 nucleotidesB158DRAFT_0433 and B158DRAFT_0434 overlap by 1 nucleotidesB158DRAFT_0434 and B158DRAFT_0435 overlap by 26 nucleotides B158DRAFT_0431: B158DRAFT_0431 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 435,124 to 436,470 _0431 B158DRAFT_0432: B158DRAFT_0432 - Predicted membrane protein, at 436,480 to 437,046 _0432 B158DRAFT_0433: B158DRAFT_0433 - Acyl carrier protein, at 437,046 to 437,303 _0433 B158DRAFT_0434: B158DRAFT_0434 - Acyl carrier protein, at 437,303 to 437,566 _0434 B158DRAFT_0435: B158DRAFT_0435 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 437,541 to 438,341 _0435 Position (kb) 436 437 438Strain fitness (log2 ratio) -1 0 1 2 3 4at 435.540 kb on + strand, within B158DRAFT_0431at 435.548 kb on - strand, within B158DRAFT_0431at 435.595 kb on + strand, within B158DRAFT_0431at 435.670 kb on + strand, within B158DRAFT_0431at 435.678 kb on + strand, within B158DRAFT_0431at 435.749 kb on + strand, within B158DRAFT_0431at 435.827 kb on + strand, within B158DRAFT_0431at 435.837 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.885 kb on - strand, within B158DRAFT_0431at 435.960 kb on + strand, within B158DRAFT_0431at 436.028 kb on + strand, within B158DRAFT_0431at 436.089 kb on - strand, within B158DRAFT_0431at 436.103 kb on + strand, within B158DRAFT_0431at 436.103 kb on + strand, within B158DRAFT_0431at 436.177 kb on + strand, within B158DRAFT_0431at 436.204 kb on + strand, within B158DRAFT_0431at 436.212 kb on - strand, within B158DRAFT_0431at 436.212 kb on - strand, within B158DRAFT_0431at 436.217 kb on - strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.223 kb on + strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.231 kb on - strand, within B158DRAFT_0431at 436.298 kb on - strand, within B158DRAFT_0431at 436.355 kb on + strandat 436.355 kb on + strandat 436.360 kb on + strandat 436.360 kb on + strandat 436.363 kb on - strandat 436.368 kb on - strandat 436.368 kb on - strandat 436.368 kb on - strandat 436.446 kb on + strandat 436.454 kb on - strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.478 kb on + strandat 436.486 kb on - strandat 436.496 kb on - strandat 436.536 kb on - strandat 436.561 kb on + strand, within B158DRAFT_0432at 436.561 kb on + strand, within B158DRAFT_0432at 436.569 kb on - strand, within B158DRAFT_0432at 436.664 kb on - strand, within B158DRAFT_0432at 436.664 kb on - strand, within B158DRAFT_0432at 436.664 kb on - strand, within B158DRAFT_0432at 436.689 kb on + strand, within B158DRAFT_0432at 436.743 kb on + strand, within B158DRAFT_0432at 436.751 kb on - strand, within B158DRAFT_0432at 436.833 kb on - strand, within B158DRAFT_0432at 436.852 kb on + strand, within B158DRAFT_0432at 436.875 kb on + strand, within B158DRAFT_0432at 436.883 kb on + strand, within B158DRAFT_0432at 436.891 kb on - strand, within B158DRAFT_0432at 436.905 kb on + strand, within B158DRAFT_0432at 436.905 kb on + strand, within B158DRAFT_0432at 436.952 kb on + strand, within B158DRAFT_0432at 437.049 kb on + strandat 437.099 kb on - strand, within B158DRAFT_0433at 437.194 kb on + strand, within B158DRAFT_0433at 437.194 kb on + strand, within B158DRAFT_0433at 437.194 kb on + strand, within B158DRAFT_0433at 437.194 kb on + strand, within B158DRAFT_0433at 437.202 kb on - strand, within B158DRAFT_0433at 437.202 kb on - strand, within B158DRAFT_0433at 437.202 kb on - strand, within B158DRAFT_0433at 437.202 kb on - strand, within B158DRAFT_0433at 437.202 kb on - strand, within B158DRAFT_0433at 437.221 kb on - strand, within B158DRAFT_0433at 437.314 kb on - strandat 437.335 kb on + strand, within B158DRAFT_0434at 437.348 kb on - strand, within B158DRAFT_0434at 437.447 kb on + strand, within B158DRAFT_0434at 437.453 kb on + strand, within B158DRAFT_0434at 437.455 kb on - strand, within B158DRAFT_0434at 437.455 kb on - strand, within B158DRAFT_0434at 437.455 kb on - strand, within B158DRAFT_0434at 437.753 kb on - strand, within B158DRAFT_0435at 437.786 kb on + strand, within B158DRAFT_0435at 437.835 kb on + strand, within B158DRAFT_0435at 437.835 kb on + strand, within B158DRAFT_0435at 437.835 kb on + strand, within B158DRAFT_0435at 437.835 kb on + strand, within B158DRAFT_0435at 437.835 kb on + strand, within B158DRAFT_0435at 437.843 kb on - strand, within B158DRAFT_0435at 437.843 kb on - strand, within B158DRAFT_0435at 437.843 kb on - strand, within B158DRAFT_0435at 437.843 kb on - strand, within B158DRAFT_0435at 437.853 kb on - strand, within B158DRAFT_0435at 437.874 kb on + strand, within B158DRAFT_0435at 437.881 kb on - strand, within B158DRAFT_0435at 437.998 kb on - strand, within B158DRAFT_0435

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml
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435,540 + B158DRAFT_0431 0.31 +0.7
435,548 - B158DRAFT_0431 0.31 +0.6
435,595 + B158DRAFT_0431 0.35 +0.8
435,670 + B158DRAFT_0431 0.41 +1.1
435,678 + B158DRAFT_0431 0.41 +0.3
435,749 + B158DRAFT_0431 0.46 +0.6
435,827 + B158DRAFT_0431 0.52 +0.7
435,837 - B158DRAFT_0431 0.53 +0.5
435,845 - B158DRAFT_0431 0.54 -0.5
435,845 - B158DRAFT_0431 0.54 +0.8
435,845 - B158DRAFT_0431 0.54 +0.4
435,885 - B158DRAFT_0431 0.56 +0.7
435,960 + B158DRAFT_0431 0.62 +1.2
436,028 + B158DRAFT_0431 0.67 +0.4
436,089 - B158DRAFT_0431 0.72 +0.4
436,103 + B158DRAFT_0431 0.73 +1.3
436,103 + B158DRAFT_0431 0.73 +0.2
436,177 + B158DRAFT_0431 0.78 +0.5
436,204 + B158DRAFT_0431 0.80 +0.7
436,212 - B158DRAFT_0431 0.81 +0.7
436,212 - B158DRAFT_0431 0.81 +0.6
436,217 - B158DRAFT_0431 0.81 +0.4
436,223 + B158DRAFT_0431 0.82 +0.7
436,223 + B158DRAFT_0431 0.82 +0.7
436,223 + B158DRAFT_0431 0.82 +0.3
436,223 + B158DRAFT_0431 0.82 +0.6
436,223 + B158DRAFT_0431 0.82 +0.9
436,223 + B158DRAFT_0431 0.82 +1.4
436,223 + B158DRAFT_0431 0.82 -0.3
436,223 + B158DRAFT_0431 0.82 +0.6
436,223 + B158DRAFT_0431 0.82 +0.6
436,223 + B158DRAFT_0431 0.82 +0.4
436,223 + B158DRAFT_0431 0.82 +0.3
436,223 + B158DRAFT_0431 0.82 +0.1
436,231 - B158DRAFT_0431 0.82 +1.1
436,231 - B158DRAFT_0431 0.82 +0.9
436,231 - B158DRAFT_0431 0.82 +0.4
436,231 - B158DRAFT_0431 0.82 +0.5
436,231 - B158DRAFT_0431 0.82 +0.2
436,231 - B158DRAFT_0431 0.82 +0.4
436,231 - B158DRAFT_0431 0.82 +0.2
436,231 - B158DRAFT_0431 0.82 +0.9
436,231 - B158DRAFT_0431 0.82 +0.7
436,231 - B158DRAFT_0431 0.82 +0.6
436,231 - B158DRAFT_0431 0.82 +0.6
436,231 - B158DRAFT_0431 0.82 +0.4
436,231 - B158DRAFT_0431 0.82 +0.5
436,231 - B158DRAFT_0431 0.82 +0.5
436,298 - B158DRAFT_0431 0.87 +0.7
436,355 + +0.6
436,355 + +0.5
436,360 + +0.7
436,360 + +0.6
436,363 - +0.3
436,368 - +0.7
436,368 - +0.1
436,368 - +0.6
436,446 + +0.5
436,454 - +0.9
436,478 + +1.7
436,478 + +0.7
436,478 + +0.6
436,478 + +0.5
436,478 + +0.2
436,478 + +0.6
436,478 + -0.4
436,486 - +0.1
436,496 - -0.7
436,536 - +4.6
436,561 + B158DRAFT_0432 0.14 +0.4
436,561 + B158DRAFT_0432 0.14 +0.4
436,569 - B158DRAFT_0432 0.16 +4.1
436,664 - B158DRAFT_0432 0.32 +4.3
436,664 - B158DRAFT_0432 0.32 +4.2
436,664 - B158DRAFT_0432 0.32 +4.2
436,689 + B158DRAFT_0432 0.37 +0.7
436,743 + B158DRAFT_0432 0.46 +0.9
436,751 - B158DRAFT_0432 0.48 +1.1
436,833 - B158DRAFT_0432 0.62 +2.8
436,852 + B158DRAFT_0432 0.66 +0.3
436,875 + B158DRAFT_0432 0.70 +0.4
436,883 + B158DRAFT_0432 0.71 +0.6
436,891 - B158DRAFT_0432 0.72 +4.5
436,905 + B158DRAFT_0432 0.75 +0.7
436,905 + B158DRAFT_0432 0.75 +1.0
436,952 + B158DRAFT_0432 0.83 +0.7
437,049 + +0.4
437,099 - B158DRAFT_0433 0.21 +0.3
437,194 + B158DRAFT_0433 0.57 +0.4
437,194 + B158DRAFT_0433 0.57 +0.3
437,194 + B158DRAFT_0433 0.57 +0.6
437,194 + B158DRAFT_0433 0.57 +0.3
437,202 - B158DRAFT_0433 0.60 +0.6
437,202 - B158DRAFT_0433 0.60 +0.3
437,202 - B158DRAFT_0433 0.60 +0.8
437,202 - B158DRAFT_0433 0.60 +0.6
437,202 - B158DRAFT_0433 0.60 +0.6
437,221 - B158DRAFT_0433 0.68 +0.6
437,314 - +0.3
437,335 + B158DRAFT_0434 0.12 +0.7
437,348 - B158DRAFT_0434 0.17 +0.5
437,447 + B158DRAFT_0434 0.55 +0.2
437,453 + B158DRAFT_0434 0.57 +0.3
437,455 - B158DRAFT_0434 0.58 +1.8
437,455 - B158DRAFT_0434 0.58 +0.1
437,455 - B158DRAFT_0434 0.58 +0.5
437,753 - B158DRAFT_0435 0.26 +0.8
437,786 + B158DRAFT_0435 0.31 +0.3
437,835 + B158DRAFT_0435 0.37 +0.8
437,835 + B158DRAFT_0435 0.37 +0.8
437,835 + B158DRAFT_0435 0.37 +0.3
437,835 + B158DRAFT_0435 0.37 +0.6
437,835 + B158DRAFT_0435 0.37 -0.1
437,843 - B158DRAFT_0435 0.38 +0.2
437,843 - B158DRAFT_0435 0.38 +0.8
437,843 - B158DRAFT_0435 0.38 +0.4
437,843 - B158DRAFT_0435 0.38 +0.5
437,853 - B158DRAFT_0435 0.39 +0.4
437,874 + B158DRAFT_0435 0.42 +1.0
437,881 - B158DRAFT_0435 0.42 +0.6
437,998 - B158DRAFT_0435 0.57 +0.6

Or see this region's nucleotide sequence