Experiment: m.b. Rifampicin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0429 and B158DRAFT_0430 are separated by 11 nucleotides B158DRAFT_0430 and B158DRAFT_0431 are separated by 1 nucleotides B158DRAFT_0431 and B158DRAFT_0432 are separated by 9 nucleotides B158DRAFT_0432 and B158DRAFT_0433 overlap by 1 nucleotides B158DRAFT_0433 and B158DRAFT_0434 overlap by 1 nucleotides
B158DRAFT_0429: B158DRAFT_0429 - Predicted acyltransferase, at 433,003 to 434,736
_0429
B158DRAFT_0430: B158DRAFT_0430 - 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases, at 434,748 to 435,122
_0430
B158DRAFT_0431: B158DRAFT_0431 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 435,124 to 436,470
_0431
B158DRAFT_0432: B158DRAFT_0432 - Predicted membrane protein, at 436,480 to 437,046
_0432
B158DRAFT_0433: B158DRAFT_0433 - Acyl carrier protein, at 437,046 to 437,303
_0433
B158DRAFT_0434: B158DRAFT_0434 - Acyl carrier protein, at 437,303 to 437,566
_0434
Position (kb) 435
436
437 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 434.146 kb on + strand, within B158DRAFT_0429 at 434.164 kb on + strand, within B158DRAFT_0429 at 434.291 kb on + strand, within B158DRAFT_0429 at 434.311 kb on - strand, within B158DRAFT_0429 at 434.315 kb on + strand, within B158DRAFT_0429 at 434.323 kb on - strand, within B158DRAFT_0429 at 434.392 kb on - strand, within B158DRAFT_0429 at 434.412 kb on + strand, within B158DRAFT_0429 at 434.412 kb on + strand, within B158DRAFT_0429 at 434.415 kb on - strand, within B158DRAFT_0429 at 434.420 kb on - strand, within B158DRAFT_0429 at 434.444 kb on + strand, within B158DRAFT_0429 at 434.469 kb on + strand, within B158DRAFT_0429 at 434.469 kb on + strand, within B158DRAFT_0429 at 434.470 kb on - strand, within B158DRAFT_0429 at 434.470 kb on - strand, within B158DRAFT_0429 at 434.481 kb on + strand, within B158DRAFT_0429 at 434.490 kb on - strand, within B158DRAFT_0429 at 434.524 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.525 kb on + strand, within B158DRAFT_0429 at 434.533 kb on - strand, within B158DRAFT_0429 at 434.533 kb on - strand, within B158DRAFT_0429 at 434.533 kb on - strand, within B158DRAFT_0429 at 434.561 kb on - strand, within B158DRAFT_0429 at 434.579 kb on - strand at 434.589 kb on - strand at 434.877 kb on - strand, within B158DRAFT_0430 at 434.905 kb on + strand, within B158DRAFT_0430 at 434.993 kb on + strand, within B158DRAFT_0430 at 434.993 kb on + strand, within B158DRAFT_0430 at 435.001 kb on - strand, within B158DRAFT_0430 at 435.018 kb on - strand, within B158DRAFT_0430 at 435.076 kb on + strand, within B158DRAFT_0430 at 435.076 kb on + strand, within B158DRAFT_0430 at 435.086 kb on - strand at 435.150 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.183 kb on + strand at 435.191 kb on - strand at 435.191 kb on - strand at 435.191 kb on - strand at 435.191 kb on - strand at 435.191 kb on - strand at 435.218 kb on + strand at 435.218 kb on + strand at 435.218 kb on + strand at 435.325 kb on + strand, within B158DRAFT_0431 at 435.340 kb on - strand, within B158DRAFT_0431 at 435.370 kb on + strand, within B158DRAFT_0431 at 435.373 kb on - strand, within B158DRAFT_0431 at 435.388 kb on - strand, within B158DRAFT_0431 at 435.388 kb on - strand, within B158DRAFT_0431 at 435.390 kb on - strand, within B158DRAFT_0431 at 435.405 kb on + strand, within B158DRAFT_0431 at 435.540 kb on + strand, within B158DRAFT_0431 at 435.548 kb on - strand, within B158DRAFT_0431 at 435.595 kb on + strand, within B158DRAFT_0431 at 435.670 kb on + strand, within B158DRAFT_0431 at 435.678 kb on + strand, within B158DRAFT_0431 at 435.749 kb on + strand, within B158DRAFT_0431 at 435.827 kb on + strand, within B158DRAFT_0431 at 435.837 kb on - strand, within B158DRAFT_0431 at 435.845 kb on - strand, within B158DRAFT_0431 at 435.845 kb on - strand, within B158DRAFT_0431 at 435.845 kb on - strand, within B158DRAFT_0431 at 435.885 kb on - strand, within B158DRAFT_0431 at 435.960 kb on + strand, within B158DRAFT_0431 at 436.028 kb on + strand, within B158DRAFT_0431 at 436.089 kb on - strand, within B158DRAFT_0431 at 436.103 kb on + strand, within B158DRAFT_0431 at 436.103 kb on + strand, within B158DRAFT_0431 at 436.177 kb on + strand, within B158DRAFT_0431 at 436.204 kb on + strand, within B158DRAFT_0431 at 436.212 kb on - strand, within B158DRAFT_0431 at 436.212 kb on - strand, within B158DRAFT_0431 at 436.217 kb on - strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.223 kb on + strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.231 kb on - strand, within B158DRAFT_0431 at 436.298 kb on - strand, within B158DRAFT_0431 at 436.355 kb on + strand at 436.355 kb on + strand at 436.360 kb on + strand at 436.360 kb on + strand at 436.363 kb on - strand at 436.368 kb on - strand at 436.368 kb on - strand at 436.368 kb on - strand at 436.446 kb on + strand at 436.454 kb on - strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.478 kb on + strand at 436.486 kb on - strand at 436.496 kb on - strand at 436.536 kb on - strand at 436.561 kb on + strand, within B158DRAFT_0432 at 436.561 kb on + strand, within B158DRAFT_0432 at 436.569 kb on - strand, within B158DRAFT_0432 at 436.664 kb on - strand, within B158DRAFT_0432 at 436.664 kb on - strand, within B158DRAFT_0432 at 436.664 kb on - strand, within B158DRAFT_0432 at 436.689 kb on + strand, within B158DRAFT_0432 at 436.743 kb on + strand, within B158DRAFT_0432 at 436.751 kb on - strand, within B158DRAFT_0432 at 436.833 kb on - strand, within B158DRAFT_0432 at 436.852 kb on + strand, within B158DRAFT_0432 at 436.875 kb on + strand, within B158DRAFT_0432 at 436.883 kb on + strand, within B158DRAFT_0432 at 436.891 kb on - strand, within B158DRAFT_0432 at 436.905 kb on + strand, within B158DRAFT_0432 at 436.905 kb on + strand, within B158DRAFT_0432 at 436.952 kb on + strand, within B158DRAFT_0432 at 437.049 kb on + strand at 437.099 kb on - strand, within B158DRAFT_0433 at 437.194 kb on + strand, within B158DRAFT_0433 at 437.194 kb on + strand, within B158DRAFT_0433 at 437.194 kb on + strand, within B158DRAFT_0433 at 437.194 kb on + strand, within B158DRAFT_0433 at 437.202 kb on - strand, within B158DRAFT_0433 at 437.202 kb on - strand, within B158DRAFT_0433 at 437.202 kb on - strand, within B158DRAFT_0433 at 437.202 kb on - strand, within B158DRAFT_0433 at 437.202 kb on - strand, within B158DRAFT_0433 at 437.221 kb on - strand, within B158DRAFT_0433 at 437.314 kb on - strand at 437.335 kb on + strand, within B158DRAFT_0434 at 437.348 kb on - strand, within B158DRAFT_0434 at 437.447 kb on + strand, within B158DRAFT_0434 at 437.453 kb on + strand, within B158DRAFT_0434 at 437.455 kb on - strand, within B158DRAFT_0434 at 437.455 kb on - strand, within B158DRAFT_0434 at 437.455 kb on - strand, within B158DRAFT_0434
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml remove 434,146 + B158DRAFT_0429 0.66 +0.7 434,164 + B158DRAFT_0429 0.67 +0.5 434,291 + B158DRAFT_0429 0.74 +0.4 434,311 - B158DRAFT_0429 0.75 +0.5 434,315 + B158DRAFT_0429 0.76 +0.7 434,323 - B158DRAFT_0429 0.76 +0.8 434,392 - B158DRAFT_0429 0.80 +0.4 434,412 + B158DRAFT_0429 0.81 +0.5 434,412 + B158DRAFT_0429 0.81 +1.1 434,415 - B158DRAFT_0429 0.81 +0.5 434,420 - B158DRAFT_0429 0.82 +0.6 434,444 + B158DRAFT_0429 0.83 +0.4 434,469 + B158DRAFT_0429 0.85 +0.5 434,469 + B158DRAFT_0429 0.85 +0.5 434,470 - B158DRAFT_0429 0.85 +0.5 434,470 - B158DRAFT_0429 0.85 +0.6 434,481 + B158DRAFT_0429 0.85 +0.5 434,490 - B158DRAFT_0429 0.86 +0.7 434,524 + B158DRAFT_0429 0.88 +0.5 434,525 + B158DRAFT_0429 0.88 +0.7 434,525 + B158DRAFT_0429 0.88 +0.6 434,525 + B158DRAFT_0429 0.88 +0.4 434,525 + B158DRAFT_0429 0.88 +0.6 434,525 + B158DRAFT_0429 0.88 +0.6 434,525 + B158DRAFT_0429 0.88 +0.8 434,525 + B158DRAFT_0429 0.88 +0.9 434,525 + B158DRAFT_0429 0.88 +0.3 434,533 - B158DRAFT_0429 0.88 -0.0 434,533 - B158DRAFT_0429 0.88 +0.5 434,533 - B158DRAFT_0429 0.88 +0.6 434,561 - B158DRAFT_0429 0.90 +0.4 434,579 - +0.1 434,589 - +0.5 434,877 - B158DRAFT_0430 0.34 +0.7 434,905 + B158DRAFT_0430 0.42 +0.6 434,993 + B158DRAFT_0430 0.65 +0.0 434,993 + B158DRAFT_0430 0.65 +0.9 435,001 - B158DRAFT_0430 0.67 +0.9 435,018 - B158DRAFT_0430 0.72 -1.5 435,076 + B158DRAFT_0430 0.87 +0.2 435,076 + B158DRAFT_0430 0.87 +0.7 435,086 - +0.7 435,150 + +0.5 435,183 + +0.7 435,183 + +0.7 435,183 + +0.6 435,183 + +0.8 435,183 + +0.8 435,183 + +1.1 435,183 + +0.6 435,183 + +0.8 435,183 + +0.4 435,183 + -0.2 435,191 - +0.4 435,191 - +0.9 435,191 - +0.5 435,191 - +0.7 435,191 - +0.7 435,218 + +0.7 435,218 + +0.9 435,218 + +0.6 435,325 + B158DRAFT_0431 0.15 +0.5 435,340 - B158DRAFT_0431 0.16 +0.8 435,370 + B158DRAFT_0431 0.18 +0.8 435,373 - B158DRAFT_0431 0.18 -0.1 435,388 - B158DRAFT_0431 0.20 +0.6 435,388 - B158DRAFT_0431 0.20 +0.9 435,390 - B158DRAFT_0431 0.20 +0.2 435,405 + B158DRAFT_0431 0.21 +0.6 435,540 + B158DRAFT_0431 0.31 +0.7 435,548 - B158DRAFT_0431 0.31 +0.6 435,595 + B158DRAFT_0431 0.35 +0.8 435,670 + B158DRAFT_0431 0.41 +1.1 435,678 + B158DRAFT_0431 0.41 +0.3 435,749 + B158DRAFT_0431 0.46 +0.6 435,827 + B158DRAFT_0431 0.52 +0.7 435,837 - B158DRAFT_0431 0.53 +0.5 435,845 - B158DRAFT_0431 0.54 -0.5 435,845 - B158DRAFT_0431 0.54 +0.8 435,845 - B158DRAFT_0431 0.54 +0.4 435,885 - B158DRAFT_0431 0.56 +0.7 435,960 + B158DRAFT_0431 0.62 +1.2 436,028 + B158DRAFT_0431 0.67 +0.4 436,089 - B158DRAFT_0431 0.72 +0.4 436,103 + B158DRAFT_0431 0.73 +1.3 436,103 + B158DRAFT_0431 0.73 +0.2 436,177 + B158DRAFT_0431 0.78 +0.5 436,204 + B158DRAFT_0431 0.80 +0.7 436,212 - B158DRAFT_0431 0.81 +0.7 436,212 - B158DRAFT_0431 0.81 +0.6 436,217 - B158DRAFT_0431 0.81 +0.4 436,223 + B158DRAFT_0431 0.82 +0.7 436,223 + B158DRAFT_0431 0.82 +0.7 436,223 + B158DRAFT_0431 0.82 +0.3 436,223 + B158DRAFT_0431 0.82 +0.6 436,223 + B158DRAFT_0431 0.82 +0.9 436,223 + B158DRAFT_0431 0.82 +1.4 436,223 + B158DRAFT_0431 0.82 -0.3 436,223 + B158DRAFT_0431 0.82 +0.6 436,223 + B158DRAFT_0431 0.82 +0.6 436,223 + B158DRAFT_0431 0.82 +0.4 436,223 + B158DRAFT_0431 0.82 +0.3 436,223 + B158DRAFT_0431 0.82 +0.1 436,231 - B158DRAFT_0431 0.82 +1.1 436,231 - B158DRAFT_0431 0.82 +0.9 436,231 - B158DRAFT_0431 0.82 +0.4 436,231 - B158DRAFT_0431 0.82 +0.5 436,231 - B158DRAFT_0431 0.82 +0.2 436,231 - B158DRAFT_0431 0.82 +0.4 436,231 - B158DRAFT_0431 0.82 +0.2 436,231 - B158DRAFT_0431 0.82 +0.9 436,231 - B158DRAFT_0431 0.82 +0.7 436,231 - B158DRAFT_0431 0.82 +0.6 436,231 - B158DRAFT_0431 0.82 +0.6 436,231 - B158DRAFT_0431 0.82 +0.4 436,231 - B158DRAFT_0431 0.82 +0.5 436,231 - B158DRAFT_0431 0.82 +0.5 436,298 - B158DRAFT_0431 0.87 +0.7 436,355 + +0.6 436,355 + +0.5 436,360 + +0.7 436,360 + +0.6 436,363 - +0.3 436,368 - +0.7 436,368 - +0.1 436,368 - +0.6 436,446 + +0.5 436,454 - +0.9 436,478 + +1.7 436,478 + +0.7 436,478 + +0.6 436,478 + +0.5 436,478 + +0.2 436,478 + +0.6 436,478 + -0.4 436,486 - +0.1 436,496 - -0.7 436,536 - +4.6 436,561 + B158DRAFT_0432 0.14 +0.4 436,561 + B158DRAFT_0432 0.14 +0.4 436,569 - B158DRAFT_0432 0.16 +4.1 436,664 - B158DRAFT_0432 0.32 +4.3 436,664 - B158DRAFT_0432 0.32 +4.2 436,664 - B158DRAFT_0432 0.32 +4.2 436,689 + B158DRAFT_0432 0.37 +0.7 436,743 + B158DRAFT_0432 0.46 +0.9 436,751 - B158DRAFT_0432 0.48 +1.1 436,833 - B158DRAFT_0432 0.62 +2.8 436,852 + B158DRAFT_0432 0.66 +0.3 436,875 + B158DRAFT_0432 0.70 +0.4 436,883 + B158DRAFT_0432 0.71 +0.6 436,891 - B158DRAFT_0432 0.72 +4.5 436,905 + B158DRAFT_0432 0.75 +0.7 436,905 + B158DRAFT_0432 0.75 +1.0 436,952 + B158DRAFT_0432 0.83 +0.7 437,049 + +0.4 437,099 - B158DRAFT_0433 0.21 +0.3 437,194 + B158DRAFT_0433 0.57 +0.4 437,194 + B158DRAFT_0433 0.57 +0.3 437,194 + B158DRAFT_0433 0.57 +0.6 437,194 + B158DRAFT_0433 0.57 +0.3 437,202 - B158DRAFT_0433 0.60 +0.6 437,202 - B158DRAFT_0433 0.60 +0.3 437,202 - B158DRAFT_0433 0.60 +0.8 437,202 - B158DRAFT_0433 0.60 +0.6 437,202 - B158DRAFT_0433 0.60 +0.6 437,221 - B158DRAFT_0433 0.68 +0.6 437,314 - +0.3 437,335 + B158DRAFT_0434 0.12 +0.7 437,348 - B158DRAFT_0434 0.17 +0.5 437,447 + B158DRAFT_0434 0.55 +0.2 437,453 + B158DRAFT_0434 0.57 +0.3 437,455 - B158DRAFT_0434 0.58 +1.8 437,455 - B158DRAFT_0434 0.58 +0.1 437,455 - B158DRAFT_0434 0.58 +0.5
Or see this region's nucleotide sequence