Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0430

Experiment: m.b. Rifampicin 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0429 and B158DRAFT_0430 are separated by 11 nucleotidesB158DRAFT_0430 and B158DRAFT_0431 are separated by 1 nucleotides B158DRAFT_0429: B158DRAFT_0429 - Predicted acyltransferase, at 433,003 to 434,736 _0429 B158DRAFT_0430: B158DRAFT_0430 - 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases, at 434,748 to 435,122 _0430 B158DRAFT_0431: B158DRAFT_0431 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 435,124 to 436,470 _0431 Position (kb) 434 435 436Strain fitness (log2 ratio) -1 0 1at 433.772 kb on - strand, within B158DRAFT_0429at 433.793 kb on + strand, within B158DRAFT_0429at 433.793 kb on + strand, within B158DRAFT_0429at 433.824 kb on + strand, within B158DRAFT_0429at 433.922 kb on + strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.947 kb on + strand, within B158DRAFT_0429at 433.983 kb on - strand, within B158DRAFT_0429at 434.146 kb on + strand, within B158DRAFT_0429at 434.164 kb on + strand, within B158DRAFT_0429at 434.291 kb on + strand, within B158DRAFT_0429at 434.311 kb on - strand, within B158DRAFT_0429at 434.315 kb on + strand, within B158DRAFT_0429at 434.323 kb on - strand, within B158DRAFT_0429at 434.392 kb on - strand, within B158DRAFT_0429at 434.412 kb on + strand, within B158DRAFT_0429at 434.412 kb on + strand, within B158DRAFT_0429at 434.415 kb on - strand, within B158DRAFT_0429at 434.420 kb on - strand, within B158DRAFT_0429at 434.444 kb on + strand, within B158DRAFT_0429at 434.469 kb on + strand, within B158DRAFT_0429at 434.469 kb on + strand, within B158DRAFT_0429at 434.470 kb on - strand, within B158DRAFT_0429at 434.470 kb on - strand, within B158DRAFT_0429at 434.481 kb on + strand, within B158DRAFT_0429at 434.490 kb on - strand, within B158DRAFT_0429at 434.524 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.525 kb on + strand, within B158DRAFT_0429at 434.533 kb on - strand, within B158DRAFT_0429at 434.533 kb on - strand, within B158DRAFT_0429at 434.533 kb on - strand, within B158DRAFT_0429at 434.561 kb on - strand, within B158DRAFT_0429at 434.579 kb on - strandat 434.589 kb on - strandat 434.877 kb on - strand, within B158DRAFT_0430at 434.905 kb on + strand, within B158DRAFT_0430at 434.993 kb on + strand, within B158DRAFT_0430at 434.993 kb on + strand, within B158DRAFT_0430at 435.001 kb on - strand, within B158DRAFT_0430at 435.018 kb on - strand, within B158DRAFT_0430at 435.076 kb on + strand, within B158DRAFT_0430at 435.076 kb on + strand, within B158DRAFT_0430at 435.086 kb on - strandat 435.150 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.183 kb on + strandat 435.191 kb on - strandat 435.191 kb on - strandat 435.191 kb on - strandat 435.191 kb on - strandat 435.191 kb on - strandat 435.218 kb on + strandat 435.218 kb on + strandat 435.218 kb on + strandat 435.325 kb on + strand, within B158DRAFT_0431at 435.340 kb on - strand, within B158DRAFT_0431at 435.370 kb on + strand, within B158DRAFT_0431at 435.373 kb on - strand, within B158DRAFT_0431at 435.388 kb on - strand, within B158DRAFT_0431at 435.388 kb on - strand, within B158DRAFT_0431at 435.390 kb on - strand, within B158DRAFT_0431at 435.405 kb on + strand, within B158DRAFT_0431at 435.540 kb on + strand, within B158DRAFT_0431at 435.548 kb on - strand, within B158DRAFT_0431at 435.595 kb on + strand, within B158DRAFT_0431at 435.670 kb on + strand, within B158DRAFT_0431at 435.678 kb on + strand, within B158DRAFT_0431at 435.749 kb on + strand, within B158DRAFT_0431at 435.827 kb on + strand, within B158DRAFT_0431at 435.837 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.845 kb on - strand, within B158DRAFT_0431at 435.885 kb on - strand, within B158DRAFT_0431at 435.960 kb on + strand, within B158DRAFT_0431at 436.028 kb on + strand, within B158DRAFT_0431at 436.089 kb on - strand, within B158DRAFT_0431at 436.103 kb on + strand, within B158DRAFT_0431at 436.103 kb on + strand, within B158DRAFT_0431

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Rifampicin 0.0004 mg/ml
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433,772 - B158DRAFT_0429 0.44 +0.5
433,793 + B158DRAFT_0429 0.46 +0.8
433,793 + B158DRAFT_0429 0.46 +0.5
433,824 + B158DRAFT_0429 0.47 +0.8
433,922 + B158DRAFT_0429 0.53 +0.7
433,930 - B158DRAFT_0429 0.53 +0.9
433,930 - B158DRAFT_0429 0.53 -0.3
433,930 - B158DRAFT_0429 0.53 +1.1
433,930 - B158DRAFT_0429 0.53 +0.6
433,947 + B158DRAFT_0429 0.54 +0.4
433,983 - B158DRAFT_0429 0.57 +0.4
434,146 + B158DRAFT_0429 0.66 +0.7
434,164 + B158DRAFT_0429 0.67 +0.5
434,291 + B158DRAFT_0429 0.74 +0.4
434,311 - B158DRAFT_0429 0.75 +0.5
434,315 + B158DRAFT_0429 0.76 +0.7
434,323 - B158DRAFT_0429 0.76 +0.8
434,392 - B158DRAFT_0429 0.80 +0.4
434,412 + B158DRAFT_0429 0.81 +0.5
434,412 + B158DRAFT_0429 0.81 +1.1
434,415 - B158DRAFT_0429 0.81 +0.5
434,420 - B158DRAFT_0429 0.82 +0.6
434,444 + B158DRAFT_0429 0.83 +0.4
434,469 + B158DRAFT_0429 0.85 +0.5
434,469 + B158DRAFT_0429 0.85 +0.5
434,470 - B158DRAFT_0429 0.85 +0.5
434,470 - B158DRAFT_0429 0.85 +0.6
434,481 + B158DRAFT_0429 0.85 +0.5
434,490 - B158DRAFT_0429 0.86 +0.7
434,524 + B158DRAFT_0429 0.88 +0.5
434,525 + B158DRAFT_0429 0.88 +0.7
434,525 + B158DRAFT_0429 0.88 +0.6
434,525 + B158DRAFT_0429 0.88 +0.4
434,525 + B158DRAFT_0429 0.88 +0.6
434,525 + B158DRAFT_0429 0.88 +0.6
434,525 + B158DRAFT_0429 0.88 +0.8
434,525 + B158DRAFT_0429 0.88 +0.9
434,525 + B158DRAFT_0429 0.88 +0.3
434,533 - B158DRAFT_0429 0.88 -0.0
434,533 - B158DRAFT_0429 0.88 +0.5
434,533 - B158DRAFT_0429 0.88 +0.6
434,561 - B158DRAFT_0429 0.90 +0.4
434,579 - +0.1
434,589 - +0.5
434,877 - B158DRAFT_0430 0.34 +0.7
434,905 + B158DRAFT_0430 0.42 +0.6
434,993 + B158DRAFT_0430 0.65 +0.0
434,993 + B158DRAFT_0430 0.65 +0.9
435,001 - B158DRAFT_0430 0.67 +0.9
435,018 - B158DRAFT_0430 0.72 -1.5
435,076 + B158DRAFT_0430 0.87 +0.2
435,076 + B158DRAFT_0430 0.87 +0.7
435,086 - +0.7
435,150 + +0.5
435,183 + +0.7
435,183 + +0.7
435,183 + +0.6
435,183 + +0.8
435,183 + +0.8
435,183 + +1.1
435,183 + +0.6
435,183 + +0.8
435,183 + +0.4
435,183 + -0.2
435,191 - +0.4
435,191 - +0.9
435,191 - +0.5
435,191 - +0.7
435,191 - +0.7
435,218 + +0.7
435,218 + +0.9
435,218 + +0.6
435,325 + B158DRAFT_0431 0.15 +0.5
435,340 - B158DRAFT_0431 0.16 +0.8
435,370 + B158DRAFT_0431 0.18 +0.8
435,373 - B158DRAFT_0431 0.18 -0.1
435,388 - B158DRAFT_0431 0.20 +0.6
435,388 - B158DRAFT_0431 0.20 +0.9
435,390 - B158DRAFT_0431 0.20 +0.2
435,405 + B158DRAFT_0431 0.21 +0.6
435,540 + B158DRAFT_0431 0.31 +0.7
435,548 - B158DRAFT_0431 0.31 +0.6
435,595 + B158DRAFT_0431 0.35 +0.8
435,670 + B158DRAFT_0431 0.41 +1.1
435,678 + B158DRAFT_0431 0.41 +0.3
435,749 + B158DRAFT_0431 0.46 +0.6
435,827 + B158DRAFT_0431 0.52 +0.7
435,837 - B158DRAFT_0431 0.53 +0.5
435,845 - B158DRAFT_0431 0.54 -0.5
435,845 - B158DRAFT_0431 0.54 +0.8
435,845 - B158DRAFT_0431 0.54 +0.4
435,885 - B158DRAFT_0431 0.56 +0.7
435,960 + B158DRAFT_0431 0.62 +1.2
436,028 + B158DRAFT_0431 0.67 +0.4
436,089 - B158DRAFT_0431 0.72 +0.4
436,103 + B158DRAFT_0431 0.73 +1.3
436,103 + B158DRAFT_0431 0.73 +0.2

Or see this region's nucleotide sequence