Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4377

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
4,887,131	+		PfGW456L13_4376	0.20	+0.7
4,887,131	+		PfGW456L13_4376	0.20	+0.3
4,887,131	+		PfGW456L13_4376	0.20	+0.5
4,887,260	+		PfGW456L13_4376	0.30	-0.4
4,887,260	+		PfGW456L13_4376	0.30	-0.4
4,887,261	-		PfGW456L13_4376	0.30	-0.2
4,887,263	+		PfGW456L13_4376	0.30	+0.4
4,887,264	-		PfGW456L13_4376	0.30	-0.3
4,887,458	+		PfGW456L13_4376	0.46	-0.8
4,887,459	-		PfGW456L13_4376	0.46	-1.2
4,887,459	-		PfGW456L13_4376	0.46	-0.9
4,887,464	+		PfGW456L13_4376	0.47	-1.3
4,887,464	+		PfGW456L13_4376	0.47	-1.7
4,887,465	-		PfGW456L13_4376	0.47	-0.9
4,887,465	-		PfGW456L13_4376	0.47	-0.3
4,887,465	-		PfGW456L13_4376	0.47	+0.2
4,887,465	-		PfGW456L13_4376	0.47	+0.4
4,887,465	-		PfGW456L13_4376	0.47	-1.4
4,887,476	+		PfGW456L13_4376	0.48	+0.3
4,887,476	+		PfGW456L13_4376	0.48	+0.2
4,887,589	-		PfGW456L13_4376	0.57	-1.5
4,887,776	+		PfGW456L13_4376	0.72	-0.0
4,887,776	+		PfGW456L13_4376	0.72	-0.5
4,887,777	-		PfGW456L13_4376	0.72	-1.2
4,887,789	-		PfGW456L13_4376	0.73	-1.5
4,887,863	+				-1.5
4,887,863	+		PfGW456L13_4376	0.79	+1.4
4,887,864	-		PfGW456L13_4376	0.79	-1.5
4,887,864	-		PfGW456L13_4376	0.79	-1.2
4,887,864	-		PfGW456L13_4376	0.79	+0.6
4,887,908	+		PfGW456L13_4376	0.83	+0.0
4,887,909	-		PfGW456L13_4376	0.83	+0.6
4,887,915	-		PfGW456L13_4376	0.84	-1.1
4,887,947	+		PfGW456L13_4376	0.86	-0.2
4,887,947	+		PfGW456L13_4376	0.86	-1.5
4,887,947	+		PfGW456L13_4376	0.86	-0.3
4,887,948	-		PfGW456L13_4376	0.86	+0.4
4,887,948	-		PfGW456L13_4376	0.86	+0.9
4,887,948	-		PfGW456L13_4376	0.86	+0.8
4,887,948	-		PfGW456L13_4376	0.86	-1.0
4,887,948	-		PfGW456L13_4376	0.86	+0.8
4,888,040	+				-0.5
4,888,040	+				+0.0
4,888,040	+				-0.5
4,888,040	+				+0.2
4,888,041	-				-1.1
4,888,116	+				+0.8
4,888,178	+		PfGW456L13_4377	0.12	+0.9
4,888,252	+		PfGW456L13_4377	0.25	+0.3
4,888,253	-		PfGW456L13_4377	0.25	-0.9
4,888,253	-		PfGW456L13_4377	0.25	+1.3
4,888,270	+		PfGW456L13_4377	0.28	+0.1
4,888,271	-		PfGW456L13_4377	0.28	+0.3
4,888,271	-		PfGW456L13_4377	0.28	+2.0
4,888,271	-		PfGW456L13_4377	0.28	+0.2
4,888,874	+		PfGW456L13_4378	0.19	+1.6
4,889,229	+		PfGW456L13_4378	0.52	+0.1
4,889,229	+		PfGW456L13_4378	0.52	+1.2
4,889,230	-		PfGW456L13_4378	0.52	-0.4
4,889,271	+		PfGW456L13_4378	0.55	+1.1
4,889,272	-		PfGW456L13_4378	0.56	-1.4
4,889,334	+		PfGW456L13_4378	0.61	+0.2
4,889,334	+		PfGW456L13_4378	0.61	-1.8
4,889,335	-		PfGW456L13_4378	0.61	-2.5
4,889,335	-		PfGW456L13_4378	0.61	-0.5
4,889,335	-		PfGW456L13_4378	0.61	+0.1
4,889,430	+		PfGW456L13_4378	0.70	+1.1
4,889,430	+		PfGW456L13_4378	0.70	-2.5
4,889,430	+		PfGW456L13_4378	0.70	+0.1
4,889,430	+		PfGW456L13_4378	0.70	-1.1
4,889,431	-		PfGW456L13_4378	0.70	+0.3
4,889,431	-		PfGW456L13_4378	0.70	+1.2
4,889,431	-		PfGW456L13_4378	0.70	-1.5
4,889,431	-		PfGW456L13_4378	0.70	+0.8