Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3991

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
4,476,503	+		PfGW456L13_3990	0.18	-2.4
4,476,503	+		PfGW456L13_3990	0.18	-1.6
4,476,504	-		PfGW456L13_3990	0.19	-0.5
4,476,788	-		PfGW456L13_3990	0.77	-0.4
4,476,794	+		PfGW456L13_3990	0.79	-2.1
4,476,801	-		PfGW456L13_3990	0.80	-1.0
4,477,180	+				+0.7
4,477,248	+				-2.6
4,477,249	-				-3.3
4,477,249	-				+0.1
4,477,347	-				-2.9
4,477,352	+				-0.6
4,477,360	+				-0.2
4,477,361	-				-1.0
4,477,388	-				-2.2
4,477,388	-				-2.7
4,477,410	+				+0.8
4,477,411	-				-2.2
4,477,411	-				+0.4
4,477,437	+				-3.0
4,477,437	+				-2.4
4,477,437	+				-1.6
4,477,437	+				-1.9
4,477,437	+				-1.0
4,477,437	+				-1.2
4,477,437	+				-1.4
4,477,438	-				+0.1
4,477,438	-				-1.5
4,477,438	-				+1.5
4,477,438	-				-2.4
4,477,453	+				-2.1
4,477,487	+				-1.9
4,477,487	+				-1.1
4,477,487	+				-1.4
4,477,488	-				-1.2
4,477,494	-				-2.8
4,477,530	+				-3.2
4,477,530	+				-0.8
4,477,531	-				-0.1
4,477,531	-				-0.5
4,477,549	-				-1.7
4,477,587	-				-1.0
4,477,587	-				-1.3
4,477,587	-				-2.0
4,477,604	-				-1.8
4,477,624	+		PfGW456L13_3991	0.11	-0.6
4,477,624	+		PfGW456L13_3991	0.11	-1.1
4,477,624	+		PfGW456L13_3991	0.11	-2.2
4,477,625	-		PfGW456L13_3991	0.11	-1.8
4,477,625	-		PfGW456L13_3991	0.11	-2.0
4,477,625	-		PfGW456L13_3991	0.11	-2.7
4,477,625	-		PfGW456L13_3991	0.11	-0.8
4,477,625	-		PfGW456L13_3991	0.11	-1.1
4,477,652	-		PfGW456L13_3991	0.13	-0.8
4,477,654	+		PfGW456L13_3991	0.14	+0.4
4,477,655	-		PfGW456L13_3991	0.14	-0.6
4,477,655	-				-1.2
4,477,769	+		PfGW456L13_3991	0.24	-1.8
4,477,817	+		PfGW456L13_3991	0.28	-1.8
4,477,818	-		PfGW456L13_3991	0.28	-2.1
4,477,873	+		PfGW456L13_3991	0.33	-2.4
4,477,873	+		PfGW456L13_3991	0.33	-2.8
4,477,874	-		PfGW456L13_3991	0.33	-1.1
4,477,874	-		PfGW456L13_3991	0.33	-2.0
4,477,874	-		PfGW456L13_3991	0.33	-3.6
4,477,874	-		PfGW456L13_3991	0.33	-1.9
4,477,874	-		PfGW456L13_3991	0.33	-0.9
4,477,874	-		PfGW456L13_3991	0.33	-1.6
4,477,918	+		PfGW456L13_3991	0.37	-0.2
4,477,918	+				-0.8
4,477,918	+		PfGW456L13_3991	0.37	-2.1
4,477,918	+		PfGW456L13_3991	0.37	-2.2
4,477,919	-		PfGW456L13_3991	0.37	-2.6
4,477,919	-		PfGW456L13_3991	0.37	-1.7
4,477,919	-		PfGW456L13_3991	0.37	-0.8
4,477,919	-		PfGW456L13_3991	0.37	-0.5
4,478,089	-		PfGW456L13_3991	0.52	-0.2
4,478,113	-		PfGW456L13_3991	0.54	-2.6
4,478,120	+				-0.8
4,478,120	+		PfGW456L13_3991	0.54	-1.9
4,478,316	+		PfGW456L13_3991	0.71	-2.8
4,478,360	+		PfGW456L13_3991	0.75	-1.1
4,478,360	+		PfGW456L13_3991	0.75	-1.5
4,478,360	+		PfGW456L13_3991	0.75	-1.6
4,478,360	+		PfGW456L13_3991	0.75	-2.2
4,478,360	+		PfGW456L13_3991	0.75	-0.4
4,478,360	+		PfGW456L13_3991	0.75	-1.5
4,478,360	+		PfGW456L13_3991	0.75	-0.2
4,478,361	-		PfGW456L13_3991	0.75	-1.6
4,478,361	-		PfGW456L13_3991	0.75	-0.5
4,478,361	-		PfGW456L13_3991	0.75	-1.8
4,478,361	-		PfGW456L13_3991	0.75	-2.4
4,478,361	-		PfGW456L13_3991	0.75	-2.5
4,478,373	+		PfGW456L13_3991	0.76	-1.2
4,478,373	+		PfGW456L13_3991	0.76	-0.6
4,478,373	+		PfGW456L13_3991	0.76	-1.5
4,478,373	+		PfGW456L13_3991	0.76	-1.7
4,478,419	+		PfGW456L13_3991	0.80	-1.6
4,478,419	+		PfGW456L13_3991	0.80	-1.6
4,478,419	+		PfGW456L13_3991	0.80	-2.7
4,478,419	+		PfGW456L13_3991	0.80	-2.0
4,478,420	-		PfGW456L13_3991	0.80	-2.3
4,478,420	-		PfGW456L13_3991	0.80	-0.2
4,478,420	-		PfGW456L13_3991	0.80	-2.8
4,478,420	-				-0.8
4,478,422	+		PfGW456L13_3991	0.81	-1.2
4,478,422	+		PfGW456L13_3991	0.81	-1.0
4,478,422	+		PfGW456L13_3991	0.81	-1.2
4,478,423	-		PfGW456L13_3991	0.81	-2.7
4,478,423	-		PfGW456L13_3991	0.81	-0.8
4,478,423	-		PfGW456L13_3991	0.81	-0.6
4,478,443	+		PfGW456L13_3991	0.82	+3.1
4,478,443	+		PfGW456L13_3991	0.82	-2.8
4,478,443	+		PfGW456L13_3991	0.82	-2.8
4,478,443	+				-0.8
4,478,443	+		PfGW456L13_3991	0.82	-2.0
4,478,443	+		PfGW456L13_3991	0.82	+0.1
4,478,443	+		PfGW456L13_3991	0.82	-0.6
4,478,444	-		PfGW456L13_3991	0.83	-0.9
4,478,444	-		PfGW456L13_3991	0.83	-1.3
4,478,560	+				-1.6
4,478,560	+				-0.2
4,478,560	+				-0.4
4,478,560	+				-0.2
4,478,560	+				-0.8
4,478,561	-				-1.6
4,478,561	-				+0.2
4,478,561	-				-0.2
4,478,561	-				-2.6
4,478,561	-				-2.2
4,478,561	-				-0.5
4,478,561	-				-0.8
4,478,561	-				+0.8
4,478,561	-				-2.4
4,478,561	-				+1.8
4,478,568	+				-0.8
4,478,568	+				-3.4
4,478,568	+				-2.2
4,478,569	-				-1.2
4,478,569	-				+0.0
4,478,569	-				-0.7
4,478,569	-				+0.0
4,478,638	+				-0.3
4,478,638	+				-0.6
4,478,638	+				-0.7
4,478,638	+				-1.7
4,478,639	-				-0.2
4,478,660	+				-0.0
4,478,683	-				-0.7
4,478,683	-				+0.7
4,478,706	+				-1.6
4,478,707	-				+1.0
4,478,739	+				+0.9
4,478,739	+				-0.9
4,478,739	+				-0.2
4,478,740	-				-0.6
4,478,740	-				+0.0
4,478,740	-				+1.0
4,478,740	-				-0.6
4,478,804	+				-1.2
4,478,805	-				-0.2
4,478,825	-				+0.9
4,478,825	-				-1.0
4,478,825	-				+2.4
4,478,869	+				+0.4
4,478,906	-				+1.3
4,478,910	-				+0.4
4,478,910	-				+1.9
4,478,910	-				-0.6
4,478,910	-				+0.4
4,478,910	-				+1.0
4,478,947	+				+1.0
4,478,948	-				-0.6
4,478,948	-				+1.3
4,478,970	+				-0.3
4,479,031	-				-0.3
4,479,031	-				+0.5
4,479,053	+				-1.6
4,479,054	-				+1.0
4,479,054	-				+1.5
4,479,054	-				+1.0
4,479,054	-				+0.0
4,479,088	-				-0.4
4,479,136	+				-2.4
4,479,137	-				-0.3
4,479,266	-				+1.2
4,479,350	+				+1.9
4,479,351	-				+1.3
4,479,390	-				+1.8
4,479,400	+				+0.4
4,479,401	-				+1.7
4,479,401	-				+1.6
4,479,429	-				+2.3
4,479,443	-				+2.2
4,479,451	-				+0.5
4,479,451	-				+1.2
4,479,451	-				+2.4
4,479,532	+				+1.1
4,479,532	+				+0.9
4,479,533	-				+1.3
4,479,533	-				+1.5
4,479,533	-				+1.1
4,479,533	-				+3.1
4,479,533	-				+1.7
4,479,533	-				+2.5
4,479,533	-				+2.0
4,479,535	-				+1.4
4,479,535	-				+1.6
4,479,535	-				+1.9
4,479,535	-				+0.8
4,479,597	+				+1.9
4,479,597	+				+1.5
4,479,598	-				+3.2
4,479,608	-				+1.4