Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3300

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
3,708,124	-				-1.1
3,708,124	-				-0.7
3,708,164	-				+0.2
3,708,164	-				+1.0
3,708,264	-				+0.9
3,708,358	-				+1.3
3,708,580	-		PfGW456L13_3299	0.52	-2.0
3,708,645	+		PfGW456L13_3299	0.71	+0.3
3,708,645	+		PfGW456L13_3299	0.71	-0.8
3,708,646	-		PfGW456L13_3299	0.71	-0.2
3,708,646	-		PfGW456L13_3299	0.71	-2.8
3,708,646	-		PfGW456L13_3299	0.71	-1.5
3,708,646	-		PfGW456L13_3299	0.71	-1.5
3,708,751	-				-0.9
3,708,751	-				+0.4
3,708,794	+				+0.8
3,708,794	+				+0.0
3,708,794	+				-0.7
3,708,863	-				-2.1
3,708,966	+				+0.3
3,708,967	-				-1.7
3,708,967	-				-3.5
3,708,971	+				+0.5
3,708,971	+				+0.2
3,708,972	-				-2.7
3,709,058	-				-1.9
3,709,145	+		PfGW456L13_3300	0.11	-2.9
3,709,145	+		PfGW456L13_3300	0.11	-3.4
3,709,145	+		PfGW456L13_3300	0.11	-1.1
3,709,145	+		PfGW456L13_3300	0.11	-3.0
3,709,146	-		PfGW456L13_3300	0.12	+0.1
3,709,146	-		PfGW456L13_3300	0.12	-3.7
3,709,146	-		PfGW456L13_3300	0.12	-0.3
3,709,146	-		PfGW456L13_3300	0.12	-2.1
3,709,146	-		PfGW456L13_3300	0.12	-1.9
3,709,146	-		PfGW456L13_3300	0.12	-2.8
3,709,146	-		PfGW456L13_3300	0.12	-1.9
3,709,146	-		PfGW456L13_3300	0.12	-0.2
3,709,322	+		PfGW456L13_3300	0.30	-1.3
3,709,322	+		PfGW456L13_3300	0.30	-2.3
3,709,434	+		PfGW456L13_3300	0.42	-2.6
3,709,434	+		PfGW456L13_3300	0.42	-1.9
3,709,434	+		PfGW456L13_3300	0.42	-0.9
3,709,435	-		PfGW456L13_3300	0.42	-2.9
3,709,435	-		PfGW456L13_3300	0.42	-2.7
3,709,498	-		PfGW456L13_3300	0.48	-3.7
3,709,498	-		PfGW456L13_3300	0.48	-3.7
3,709,683	+		PfGW456L13_3300	0.68	-2.5
3,709,683	+		PfGW456L13_3300	0.68	-4.9
3,709,683	+		PfGW456L13_3300	0.68	-2.3
3,709,683	+		PfGW456L13_3300	0.68	-0.9
3,709,683	+		PfGW456L13_3300	0.68	-2.9
3,709,683	+		PfGW456L13_3300	0.68	-3.7
3,709,683	+		PfGW456L13_3300	0.68	-1.5
3,709,683	+				+0.7
3,709,683	+		PfGW456L13_3300	0.68	-3.0
3,709,683	+		PfGW456L13_3300	0.68	-2.9
3,709,683	+		PfGW456L13_3300	0.68	-3.6
3,709,683	+		PfGW456L13_3300	0.68	-0.8
3,709,683	+		PfGW456L13_3300	0.68	-1.3
3,709,683	+		PfGW456L13_3300	0.68	-3.2
3,709,684	-		PfGW456L13_3300	0.68	-1.7
3,709,684	-		PfGW456L13_3300	0.68	-1.0
3,709,684	-		PfGW456L13_3300	0.68	-2.5
3,709,684	-		PfGW456L13_3300	0.68	-1.7
3,709,684	-		PfGW456L13_3300	0.68	-1.9
3,709,684	-		PfGW456L13_3300	0.68	-2.6
3,709,684	-		PfGW456L13_3300	0.68	-1.3
3,709,684	-		PfGW456L13_3300	0.68	-0.9
3,709,684	-		PfGW456L13_3300	0.68	-1.9
3,709,684	-		PfGW456L13_3300	0.68	-2.8
3,709,684	-				+0.7
3,709,684	-		PfGW456L13_3300	0.68	-2.9
3,709,684	-		PfGW456L13_3300	0.68	-2.1
3,709,684	-		PfGW456L13_3300	0.68	-1.2
3,709,707	+		PfGW456L13_3300	0.70	-1.9
3,709,708	-		PfGW456L13_3300	0.70	-2.0
3,709,714	+		PfGW456L13_3300	0.71	-1.3
3,709,715	-		PfGW456L13_3300	0.71	-2.1
3,709,715	-		PfGW456L13_3300	0.71	-2.3
3,709,779	+		PfGW456L13_3300	0.78	-1.7
3,709,982	-				-2.9
3,710,181	-		PfGW456L13_3301	0.19	-2.6
3,710,181	-		PfGW456L13_3301	0.19	-0.3
3,710,417	+		PfGW456L13_3301	0.44	-1.8
3,710,417	+		PfGW456L13_3301	0.44	-4.0
3,710,418	-		PfGW456L13_3301	0.44	-2.8
3,710,418	-		PfGW456L13_3301	0.44	-2.3
3,710,418	-		PfGW456L13_3301	0.44	-3.2
3,710,435	+		PfGW456L13_3301	0.46	-3.0
3,710,435	+				-0.3
3,710,436	-		PfGW456L13_3301	0.46	-2.8
3,710,436	-		PfGW456L13_3301	0.46	-2.7
3,710,730	+		PfGW456L13_3301	0.77	-2.2
3,710,730	+		PfGW456L13_3301	0.77	-2.5
3,710,730	+		PfGW456L13_3301	0.77	-1.1
3,710,730	+		PfGW456L13_3301	0.77	-3.6
3,710,731	-		PfGW456L13_3301	0.77	-2.5
3,710,731	-		PfGW456L13_3301	0.77	-1.8
3,710,909	+				+2.4
3,710,973	-				+0.1