Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3062

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
3,404,901	+		PfGW456L13_3061	0.43	-0.7
3,404,901	+		PfGW456L13_3061	0.43	-0.6
3,404,902	-		PfGW456L13_3061	0.43	+1.3
3,404,902	-		PfGW456L13_3061	0.43	+0.8
3,404,902	-		PfGW456L13_3061	0.43	-1.2
3,404,902	-		PfGW456L13_3061	0.43	-0.3
3,404,949	+		PfGW456L13_3061	0.47	+0.9
3,404,949	+		PfGW456L13_3061	0.47	+2.5
3,404,949	+		PfGW456L13_3061	0.47	+0.7
3,404,949	+		PfGW456L13_3061	0.47	-1.7
3,404,949	+		PfGW456L13_3061	0.47	+0.1
3,404,950	-		PfGW456L13_3061	0.47	+1.4
3,404,950	-		PfGW456L13_3061	0.47	-0.3
3,404,982	+		PfGW456L13_3061	0.49	+0.2
3,404,982	+		PfGW456L13_3061	0.49	-0.8
3,404,982	+		PfGW456L13_3061	0.49	+0.7
3,404,983	-		PfGW456L13_3061	0.49	-1.3
3,404,983	-		PfGW456L13_3061	0.49	-0.3
3,404,988	+		PfGW456L13_3061	0.50	-0.7
3,404,988	+		PfGW456L13_3061	0.50	+0.3
3,404,988	+		PfGW456L13_3061	0.50	-0.1
3,404,988	+		PfGW456L13_3061	0.50	+0.9
3,404,988	+		PfGW456L13_3061	0.50	-1.1
3,404,988	+		PfGW456L13_3061	0.50	+0.2
3,404,988	+		PfGW456L13_3061	0.50	-0.9
3,404,988	+		PfGW456L13_3061	0.50	+0.6
3,404,989	-		PfGW456L13_3061	0.50	-0.8
3,404,989	-		PfGW456L13_3061	0.50	-3.9
3,404,989	-		PfGW456L13_3061	0.50	+0.3
3,405,103	+		PfGW456L13_3061	0.59	-0.7
3,405,103	+		PfGW456L13_3061	0.59	+0.1
3,405,567	-				-0.3
3,405,567	-				-1.1
3,405,668	+				+0.3
3,405,669	-				-1.1
3,405,669	-				+0.9
3,405,669	-				+0.4
3,405,695	+				+1.0
3,405,695	+				+0.3
3,405,695	+				+1.9
3,405,695	+				+0.2
3,405,695	+				-2.7
3,405,695	+				+0.4
3,405,695	+				-0.1
3,405,695	+				+0.5
3,405,695	+				+0.7
3,405,695	+				+1.2
3,405,695	+				-0.5
3,405,696	-				+1.5
3,405,696	-				+0.7
3,405,699	+				+0.3
3,405,699	+				-1.7
3,405,699	+				-1.9
3,405,700	-				-1.6
3,405,700	-				-0.1
3,405,700	-				-0.9
3,405,700	-				+0.7
3,405,700	-				-0.4
3,405,700	-				-0.1
3,405,715	-				-0.1
3,405,715	-				+0.5
3,405,716	+				+0.7
3,405,716	+				+0.7
3,405,716	+				-0.9
3,405,736	+				+0.7
3,405,868	+				+1.0
3,405,868	+				-1.0
3,405,868	+				+0.1
3,405,869	-				-0.3
3,406,056	+		PfGW456L13_3062	0.19	-0.3
3,406,099	+		PfGW456L13_3062	0.24	+0.5
3,406,100	-		PfGW456L13_3062	0.24	+0.1
3,406,227	+		PfGW456L13_3062	0.38	+1.9
3,406,227	+		PfGW456L13_3062	0.38	+0.4
3,406,228	-		PfGW456L13_3062	0.38	-0.5
3,406,295	+		PfGW456L13_3062	0.45	-0.8
3,406,295	+		PfGW456L13_3062	0.45	-0.2
3,406,295	+		PfGW456L13_3062	0.45	+0.3
3,406,295	+		PfGW456L13_3062	0.45	-0.7
3,406,296	-		PfGW456L13_3062	0.45	+0.4
3,406,296	-		PfGW456L13_3062	0.45	-0.1
3,406,296	-		PfGW456L13_3062	0.45	-0.0
3,406,333	-		PfGW456L13_3062	0.49	-0.3
3,406,333	-		PfGW456L13_3062	0.49	+0.1
3,406,350	-		PfGW456L13_3062	0.51	-0.2
3,406,350	-		PfGW456L13_3062	0.51	+3.0
3,406,350	-		PfGW456L13_3062	0.51	+0.9
3,406,386	+		PfGW456L13_3062	0.55	-0.3
3,406,386	+		PfGW456L13_3062	0.55	+0.2
3,406,386	+		PfGW456L13_3062	0.55	+1.1
3,406,386	+		PfGW456L13_3062	0.55	-1.7
3,406,386	+		PfGW456L13_3062	0.55	-0.1
3,406,386	+		PfGW456L13_3062	0.55	+0.4
3,406,386	+		PfGW456L13_3062	0.55	-1.1
3,406,387	-		PfGW456L13_3062	0.55	-0.1
3,406,387	-		PfGW456L13_3062	0.55	+0.3
3,406,387	-		PfGW456L13_3062	0.55	+1.1
3,406,387	-		PfGW456L13_3062	0.55	+1.3
3,406,387	-		PfGW456L13_3062	0.55	-1.0
3,406,387	-		PfGW456L13_3062	0.55	+1.0
3,406,400	+		PfGW456L13_3062	0.57	-1.7
3,406,400	+		PfGW456L13_3062	0.57	-0.3
3,406,401	-		PfGW456L13_3062	0.57	-0.7
3,406,401	-		PfGW456L13_3062	0.57	-0.3
3,406,401	-		PfGW456L13_3062	0.57	+0.2
3,406,401	-		PfGW456L13_3062	0.57	+0.0
3,406,401	-		PfGW456L13_3062	0.57	+1.3
3,406,504	+		PfGW456L13_3062	0.68	-0.7
3,406,504	+		PfGW456L13_3062	0.68	-0.8
3,406,504	+		PfGW456L13_3062	0.68	+0.3
3,406,789	+				-2.2
3,406,789	+				+0.2
3,406,789	+				-0.8
3,406,789	+				-0.1
3,406,841	+				-0.3
3,406,841	+				-0.1
3,406,841	+				-1.1
3,406,841	+				+0.2
3,406,842	-				-0.2
3,406,842	-				+0.7
3,406,865	+				-0.9
3,406,865	+				-0.7
3,406,865	+				-0.6
3,406,866	-				-0.7
3,406,866	-				+0.7
3,406,884	+				-1.9
3,406,884	+				-0.6
3,406,885	-				+0.3
3,406,913	+				-0.9
3,406,913	+				-0.2
3,406,913	+				-0.3
3,406,917	+				+0.4
3,406,917	+				-0.3
3,406,917	+				+0.7
3,406,917	+				+0.1
3,406,917	+				-0.7
3,406,917	+				-1.7
3,406,917	+				-0.2
3,406,917	+				-0.1
3,406,918	-				-0.8
3,406,918	-				+1.4
3,406,918	-				-0.3
3,406,918	-				+2.0
3,406,918	-				+1.4
3,406,918	-				+1.6
3,406,989	+				-0.4
3,406,992	+				+0.1
3,407,005	+				-0.4
3,407,005	+				-0.6
3,407,005	+				-1.6
3,407,028	+				+0.7
3,407,621	+		PfGW456L13_3063	0.54	+0.9
3,407,621	+		PfGW456L13_3063	0.54	+2.8