Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2830

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
3,135,496	-				-0.2
3,135,496	-				-0.1
3,135,496	-				+0.0
3,135,501	+				-0.6
3,135,501	+				+0.5
3,135,501	+				-0.5
3,135,608	+				-1.6
3,135,608	+				+0.4
3,135,608	+				-0.4
3,135,609	-				-0.0
3,135,609	-				+0.2
3,135,617	+				-0.3
3,135,618	-				-0.7
3,135,760	-		PfGW456L13_2829	0.22	+0.3
3,135,875	+		PfGW456L13_2829	0.34	+0.4
3,135,876	-		PfGW456L13_2829	0.34	+0.9
3,135,920	+		PfGW456L13_2829	0.39	-0.9
3,135,920	+		PfGW456L13_2829	0.39	+0.6
3,135,921	-		PfGW456L13_2829	0.39	+0.5
3,135,921	-		PfGW456L13_2829	0.39	+1.0
3,135,921	-		PfGW456L13_2829	0.39	-0.5
3,135,953	+		PfGW456L13_2829	0.43	-1.0
3,135,954	-		PfGW456L13_2829	0.43	+0.7
3,135,986	+		PfGW456L13_2829	0.46	+0.5
3,135,987	-		PfGW456L13_2829	0.46	+0.2
3,135,987	-		PfGW456L13_2829	0.46	-1.1
3,136,076	+		PfGW456L13_2829	0.56	-0.4
3,136,076	+		PfGW456L13_2829	0.56	-0.4
3,136,076	+		PfGW456L13_2829	0.56	+0.7
3,136,247	+		PfGW456L13_2829	0.75	-0.2
3,136,304	+		PfGW456L13_2829	0.81	-0.5
3,136,304	+		PfGW456L13_2829	0.81	-1.7
3,136,304	+		PfGW456L13_2829	0.81	+0.3
3,136,304	+		PfGW456L13_2829	0.81	-0.8
3,136,305	-		PfGW456L13_2829	0.81	+0.2
3,136,346	+		PfGW456L13_2829	0.85	-0.3
3,136,346	+		PfGW456L13_2829	0.85	+0.3
3,136,373	+		PfGW456L13_2829	0.88	-1.7
3,136,373	+		PfGW456L13_2829	0.88	-0.6
3,136,374	-		PfGW456L13_2829	0.88	+0.5
3,136,374	-		PfGW456L13_2829	0.88	-1.0
3,136,614	+		PfGW456L13_2830	0.12	+0.5
3,136,614	+		PfGW456L13_2830	0.12	-0.7
3,136,614	+		PfGW456L13_2830	0.12	-0.3
3,136,614	+		PfGW456L13_2830	0.12	+0.1
3,136,635	+		PfGW456L13_2830	0.14	-2.1
3,136,636	-		PfGW456L13_2830	0.14	-0.5
3,136,636	-		PfGW456L13_2830	0.14	+0.8
3,136,636	-		PfGW456L13_2830	0.14	+2.3
3,136,636	-		PfGW456L13_2830	0.14	+2.3
3,136,835	+		PfGW456L13_2830	0.33	+0.1
3,136,835	+		PfGW456L13_2830	0.33	-1.4
3,136,835	+		PfGW456L13_2830	0.33	-1.1
3,136,836	-		PfGW456L13_2830	0.33	-0.4
3,136,836	-		PfGW456L13_2830	0.33	-0.5
3,137,158	+		PfGW456L13_2830	0.62	-0.1
3,137,159	-		PfGW456L13_2830	0.62	+0.9
3,137,261	-		PfGW456L13_2830	0.72	-0.7
3,137,295	+		PfGW456L13_2830	0.75	-2.5
3,137,295	+		PfGW456L13_2830	0.75	-0.5
3,137,296	-		PfGW456L13_2830	0.75	+0.9
3,137,296	-		PfGW456L13_2830	0.75	+0.2
3,137,568	-				+0.4
3,137,628	+				+0.4
3,137,628	+				-0.4
3,137,629	-				+0.0
3,137,629	-				+0.7
3,137,629	-				+0.6
3,137,730	+				+0.3
3,137,730	+				+2.0
3,137,730	+				-0.7
3,137,758	+				-0.8
3,137,758	+				+1.2
3,137,904	+		PfGW456L13_2831	0.29	-1.9
3,137,905	-		PfGW456L13_2831	0.29	-0.5
3,138,146	+		PfGW456L13_2831	0.64	-2.1
3,138,191	-		PfGW456L13_2831	0.70	+0.6
3,138,259	+		PfGW456L13_2831	0.80	+0.1
3,138,365	-				-0.5
3,138,394	+				-0.3
3,138,394	+				+0.2
3,138,395	-				+0.5
3,138,395	-				+0.2
3,138,395	-				+0.7
3,138,459	+				+2.9
3,138,459	+				-0.1
3,138,460	-				+0.4
3,138,460	-				-0.5
3,138,473	+				+0.8
3,138,473	+				-0.1
3,138,473	+				-0.4
3,138,473	+				+1.0
3,138,473	+				+0.3
3,138,474	-				+0.7
3,138,474	-				+3.0
3,138,474	-				-0.8
3,138,548	+				+0.9
3,138,548	+				+0.4
3,138,548	+				+0.2
3,138,548	+				+0.8
3,138,548	+				-0.9
3,138,549	-				-0.3
3,138,549	-				-0.6
3,138,549	-				-1.9
3,138,549	-				-1.7
3,138,549	-				+0.6
3,138,549	-				-0.1
3,138,549	-				-0.5
3,138,549	-				-1.2
3,138,550	+				+0.3
3,138,550	+				+2.3
3,138,550	+				-1.1
3,138,550	+				-1.0
3,138,550	+				-0.4
3,138,550	+				+0.1
3,138,550	+				-0.1
3,138,550	+				+0.7
3,138,550	+				+1.6
3,138,550	+				+0.5
3,138,550	+				+1.5
3,138,550	+				-0.4
3,138,551	-				+1.0
3,138,551	-				+0.5
3,138,551	-				-0.6
3,138,551	-				-1.0
3,138,551	-				-0.6
3,138,551	-				-0.0
3,138,551	-				+1.0
3,138,551	-				-0.1
3,138,551	-				-0.4
3,138,551	-				-0.3
3,138,551	-				-1.7
3,138,551	-				-1.7
3,138,551	-				+0.1
3,138,551	-				+0.4
3,138,551	-				-0.0
3,138,551	-				+1.1
3,138,551	-				+0.9
3,138,551	-				-0.0
3,138,557	-				+1.1
3,138,557	-				-0.1