Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1773

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
1,950,618	+		PfGW456L13_1772	0.37	+0.4
1,950,618	+		PfGW456L13_1772	0.37	+0.2
1,950,740	+				-0.6
1,950,740	+		PfGW456L13_1772	0.48	-1.9
1,950,740	+		PfGW456L13_1772	0.48	-1.9
1,950,740	+		PfGW456L13_1772	0.48	+0.1
1,950,740	+		PfGW456L13_1772	0.48	-0.9
1,950,740	+		PfGW456L13_1772	0.48	+1.4
1,950,740	+		PfGW456L13_1772	0.48	+0.7
1,950,740	+		PfGW456L13_1772	0.48	+0.5
1,950,741	-		PfGW456L13_1772	0.48	+0.1
1,950,741	-		PfGW456L13_1772	0.48	-0.3
1,950,741	-		PfGW456L13_1772	0.48	-0.0
1,950,741	-		PfGW456L13_1772	0.48	+0.6
1,950,741	-		PfGW456L13_1772	0.48	-0.4
1,950,741	-		PfGW456L13_1772	0.48	-1.2
1,950,741	-		PfGW456L13_1772	0.48	+0.2
1,950,747	+		PfGW456L13_1772	0.48	-1.4
1,950,747	+		PfGW456L13_1772	0.48	-2.4
1,950,747	+		PfGW456L13_1772	0.48	+1.0
1,950,748	-		PfGW456L13_1772	0.48	+0.0
1,950,748	-		PfGW456L13_1772	0.48	+1.2
1,950,791	+		PfGW456L13_1772	0.52	-0.7
1,950,791	+		PfGW456L13_1772	0.52	+0.3
1,950,792	-		PfGW456L13_1772	0.52	+1.3
1,950,792	-		PfGW456L13_1772	0.52	-0.0
1,950,792	-		PfGW456L13_1772	0.52	+0.4
1,950,792	-		PfGW456L13_1772	0.52	-2.1
1,950,792	-		PfGW456L13_1772	0.52	-0.6
1,950,792	-		PfGW456L13_1772	0.52	+0.4
1,950,792	-		PfGW456L13_1772	0.52	-0.8
1,950,975	-		PfGW456L13_1772	0.68	+1.5
1,951,165	-		PfGW456L13_1772	0.85	-0.7
1,951,165	-		PfGW456L13_1772	0.85	+1.6
1,951,254	+				-1.0
1,951,254	+				+0.0
1,951,254	+				+0.4
1,951,254	+				-0.7
1,951,255	-				+0.3
1,951,256	+				-0.1
1,951,256	+				+1.4
1,951,256	+				-0.6
1,951,256	+				-0.2
1,951,257	-				-0.7
1,951,257	-				-0.7
1,951,257	-				-1.4
1,951,257	-				+0.3
1,951,274	+				-1.3
1,951,274	+				+0.2
1,951,274	+				-0.6
1,951,300	+				-0.6
1,951,300	+				-0.0
1,951,300	+				-0.4
1,951,301	-				-0.0
1,951,301	-				+0.1
1,951,341	+				-0.0
1,951,341	+				-0.7
1,951,341	+				+0.4
1,951,341	+				-0.3
1,951,341	+				-1.7
1,951,341	+				-0.2
1,951,342	-				-1.6
1,951,342	-				-1.2
1,951,342	-				+0.1
1,951,342	-				+1.1
1,951,397	+				-0.1
1,951,398	-				-0.1
1,951,398	-				+0.2
1,951,398	-				-0.5
1,951,404	+				+1.4
1,951,405	-				-0.2
1,951,405	-				+1.0
1,951,405	-				-0.4
1,951,437	+				-0.1
1,951,437	+				+0.4
1,951,437	+				+0.8
1,951,438	-				-0.6
1,951,438	-				-1.8
1,951,438	-				-1.0
1,951,440	+				+0.5
1,951,494	+				-0.9
1,951,494	+				+0.2
1,951,494	+				+0.4
1,951,494	+				-0.5
1,951,494	+				-2.1
1,951,494	+				+0.1
1,951,494	+				-0.7
1,951,494	+				+0.2
1,951,495	-				-1.9
1,951,495	-				-1.6
1,951,495	-				-1.2
1,951,495	-				+0.8
1,951,495	-				+0.3
1,951,495	-				-0.0
1,951,495	-				+1.4
1,951,586	+				+0.4
1,951,629	+				-1.0
1,951,629	+				-1.0
1,951,630	-				-1.9
1,951,630	-				+0.7
1,951,630	-				-2.7
1,951,722	-		PfGW456L13_1773	0.16	-2.0
1,951,722	-		PfGW456L13_1773	0.16	-1.6
1,951,821	+		PfGW456L13_1773	0.25	-2.7
1,951,822	-		PfGW456L13_1773	0.25	-0.5
1,951,822	-		PfGW456L13_1773	0.25	-0.9
1,951,822	-		PfGW456L13_1773	0.25	-1.4
1,952,218	+		PfGW456L13_1773	0.61	-0.9
1,952,218	+		PfGW456L13_1773	0.61	-0.6
1,952,218	+		PfGW456L13_1773	0.61	-0.0
1,952,219	-		PfGW456L13_1773	0.61	-0.5
1,952,219	-		PfGW456L13_1773	0.61	-0.4
1,952,220	+		PfGW456L13_1773	0.61	-1.0
1,952,221	-		PfGW456L13_1773	0.61	-1.6
1,952,221	-		PfGW456L13_1773	0.61	-1.6
1,952,272	-		PfGW456L13_1773	0.66	-2.2
1,952,310	+		PfGW456L13_1773	0.70	+0.5
1,952,377	-		PfGW456L13_1773	0.76	-3.0
1,952,377	-		PfGW456L13_1773	0.76	-1.8
1,952,377	-		PfGW456L13_1773	0.76	-2.8
1,952,614	+				-0.9
1,952,614	+				-0.8
1,952,615	-				-1.9
1,952,615	-				-0.3
1,952,615	-				-0.6
1,952,615	-				-3.4
1,952,615	-				-0.6
1,952,615	-				-1.0
1,952,615	-				-0.4
1,952,618	+				-0.8
1,952,618	+				-1.4
1,952,618	+				-0.2
1,952,618	+				-2.5
1,952,619	-				-2.1
1,952,619	-				-1.5
1,952,619	-				-1.0
1,952,619	-				-1.0
1,952,619	-				-1.4
1,952,619	-				-3.4
1,952,753	+				+2.9
1,952,753	+				+0.4
1,952,753	+				-2.5
1,952,754	-				-2.0
1,952,754	-				-0.6
1,952,754	-				-0.4
1,952,754	-				-2.2
1,952,754	-				-2.6
1,952,846	+		PfGW456L13_1774	0.18	+1.2
1,952,846	+		PfGW456L13_1774	0.18	-2.9
1,952,846	+		PfGW456L13_1774	0.18	-0.6
1,952,847	-		PfGW456L13_1774	0.18	-1.4
1,952,847	-		PfGW456L13_1774	0.18	-0.1
1,952,847	-		PfGW456L13_1774	0.18	-1.3
1,952,913	+		PfGW456L13_1774	0.24	-2.2
1,953,243	-		PfGW456L13_1774	0.55	-0.3
1,953,296	+		PfGW456L13_1774	0.60	-0.1
1,953,296	+		PfGW456L13_1774	0.60	-1.2
1,953,297	-		PfGW456L13_1774	0.60	-2.5
1,953,297	-		PfGW456L13_1774	0.60	-1.1
1,953,297	-		PfGW456L13_1774	0.60	+0.4
1,953,302	+		PfGW456L13_1774	0.60	-0.3
1,953,320	-		PfGW456L13_1774	0.62	-2.5
1,953,603	-		PfGW456L13_1774	0.89	-1.4
1,953,603	-		PfGW456L13_1774	0.89	-1.4
1,953,603	-		PfGW456L13_1774	0.89	-2.4