Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1749

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
1,925,215	+		PfGW456L13_1748	0.23	+0.0
1,925,327	+		PfGW456L13_1748	0.35	+0.3
1,925,327	+		PfGW456L13_1748	0.35	-1.4
1,925,327	+		PfGW456L13_1748	0.35	-0.5
1,925,327	+		PfGW456L13_1748	0.35	+0.2
1,925,327	+		PfGW456L13_1748	0.35	-0.6
1,925,327	+		PfGW456L13_1748	0.35	+0.4
1,925,327	+		PfGW456L13_1748	0.35	-0.5
1,925,328	-		PfGW456L13_1748	0.35	-1.9
1,925,328	-		PfGW456L13_1748	0.35	-1.1
1,925,328	-		PfGW456L13_1748	0.35	+0.4
1,925,328	-		PfGW456L13_1748	0.35	-0.4
1,925,338	-		PfGW456L13_1748	0.36	+1.3
1,925,338	-		PfGW456L13_1748	0.36	-0.6
1,925,435	+		PfGW456L13_1748	0.47	+0.5
1,925,435	+		PfGW456L13_1748	0.47	+1.0
1,925,435	+		PfGW456L13_1748	0.47	+1.0
1,925,435	+		PfGW456L13_1748	0.47	-0.4
1,925,435	+		PfGW456L13_1748	0.47	-0.6
1,925,435	+		PfGW456L13_1748	0.47	+0.4
1,925,436	-		PfGW456L13_1748	0.47	-0.5
1,925,436	-		PfGW456L13_1748	0.47	+0.4
1,925,436	-		PfGW456L13_1748	0.47	+0.6
1,925,436	-		PfGW456L13_1748	0.47	+0.1
1,925,436	-		PfGW456L13_1748	0.47	-0.3
1,925,477	-		PfGW456L13_1748	0.51	+1.2
1,925,594	+		PfGW456L13_1748	0.64	+0.0
1,925,595	-		PfGW456L13_1748	0.64	+3.0
1,925,605	+		PfGW456L13_1748	0.66	-0.6
1,925,605	+		PfGW456L13_1748	0.66	+0.3
1,925,606	-		PfGW456L13_1748	0.66	-0.1
1,925,606	-		PfGW456L13_1748	0.66	-2.2
1,925,925	+				+0.6
1,925,926	-				+0.5
1,925,926	-				-1.0
1,925,926	-				+0.0
1,925,966	+				-0.3
1,925,985	-				-1.0
1,926,056	+				-2.2
1,926,056	+				+1.0
1,926,057	-				+1.0
1,926,057	-				+1.0
1,926,057	-				-2.4
1,926,123	+				-2.2
1,926,123	+				-1.9
1,926,124	-				-1.0
1,926,127	+				-2.4
1,926,127	+				-0.8
1,926,127	+				-0.4
1,926,127	+				-2.4
1,926,127	+				-1.4
1,926,127	+				-1.6
1,926,127	+				-0.0
1,926,127	+				-1.6
1,926,127	+				-0.4
1,926,127	+				-2.2
1,926,127	+				-1.6
1,926,127	+				-1.9
1,926,127	+				-2.7
1,926,127	+				+1.0
1,926,128	-				+0.4
1,926,128	-				-1.4
1,926,128	-				-1.4
1,926,128	-				+1.0
1,926,128	-				-3.5
1,926,128	-				-0.6
1,926,128	-				-1.9
1,926,128	-				-1.4
1,926,128	-				-2.9
1,926,128	-				-3.2
1,926,128	-				-2.0
1,926,129	+				-0.6
1,926,129	+				-2.4
1,926,130	-				-2.2
1,926,130	-				-0.0
1,926,130	-				-1.4
1,926,140	+				-1.4
1,926,141	-				-0.6
1,926,226	+		PfGW456L13_1749	0.15	-2.7
1,926,227	-		PfGW456L13_1749	0.15	-3.0
1,926,227	-		PfGW456L13_1749	0.15	-2.5
1,926,227	-		PfGW456L13_1749	0.15	-0.6
1,926,610	+		PfGW456L13_1749	0.46	-0.6
1,926,610	+		PfGW456L13_1749	0.46	-2.2
1,926,611	-		PfGW456L13_1749	0.46	-0.9
1,926,611	-		PfGW456L13_1749	0.46	-2.4
1,926,611	-		PfGW456L13_1749	0.46	-1.0
1,926,706	+		PfGW456L13_1749	0.54	-2.7
1,926,722	-		PfGW456L13_1749	0.56	-1.6
1,926,844	+		PfGW456L13_1749	0.66	-1.4
1,926,976	+		PfGW456L13_1749	0.76	+0.6
1,926,991	+		PfGW456L13_1749	0.78	-1.4
1,926,991	+		PfGW456L13_1749	0.78	-2.5
1,926,992	-		PfGW456L13_1749	0.78	-0.0
1,927,088	-		PfGW456L13_1749	0.86	-1.6
1,927,153	-				-0.2
1,927,177	+				-1.0
1,927,177	+				-2.0
1,927,286	-				+0.0
1,927,314	+				+0.4
1,927,315	-				+1.1
1,927,341	+				+0.7
1,927,341	+				+0.3
1,927,341	+				-0.1
1,927,341	+				-0.2
1,927,341	+				-0.3
1,927,341	+				+0.8
1,927,342	-				-1.7
1,927,342	-				+2.1
1,927,342	-				+1.5
1,927,379	+				-0.1
1,927,412	+				-0.8
1,927,412	+				+0.8
1,927,413	-				-0.3
1,927,413	-				-1.7
1,927,413	-				-0.4
1,927,415	+				-0.4
1,927,415	+				+1.2
1,927,415	+				-2.1
1,927,415	+				-0.5
1,927,416	-				+0.9
1,927,416	-				-0.0
1,927,416	-				+0.4
1,927,481	+		PfGW456L13_1750	0.28	+2.3
1,927,482	-		PfGW456L13_1750	0.28	-1.1
1,927,482	-		PfGW456L13_1750	0.28	+1.2
1,927,482	-		PfGW456L13_1750	0.28	+0.2
1,927,482	-		PfGW456L13_1750	0.28	+1.0
1,927,482	-		PfGW456L13_1750	0.28	+0.7
1,927,490	+		PfGW456L13_1750	0.31	-1.2
1,927,490	+		PfGW456L13_1750	0.31	+0.5
1,927,490	+		PfGW456L13_1750	0.31	+0.7
1,927,490	+		PfGW456L13_1750	0.31	-0.0
1,927,490	+		PfGW456L13_1750	0.31	-1.4
1,927,490	+		PfGW456L13_1750	0.31	+1.0
1,927,490	+		PfGW456L13_1750	0.31	+0.6
1,927,490	+		PfGW456L13_1750	0.31	-0.2
1,927,491	-		PfGW456L13_1750	0.32	+1.0
1,927,491	-		PfGW456L13_1750	0.32	+1.0
1,927,491	-		PfGW456L13_1750	0.32	+0.8
1,927,491	-		PfGW456L13_1750	0.32	-0.3
1,927,491	-		PfGW456L13_1750	0.32	+1.4
1,927,491	-		PfGW456L13_1750	0.32	-0.9
1,927,524	+				-1.0
1,927,525	-		PfGW456L13_1750	0.46	+1.5
1,927,525	-		PfGW456L13_1750	0.46	+0.2
1,927,525	-		PfGW456L13_1750	0.46	+0.1
1,927,525	-		PfGW456L13_1750	0.46	+0.4
1,927,525	-		PfGW456L13_1750	0.46	-0.2
1,927,525	-		PfGW456L13_1750	0.46	+1.4
1,927,525	-		PfGW456L13_1750	0.46	-0.2
1,927,525	-		PfGW456L13_1750	0.46	+0.1
1,927,525	-		PfGW456L13_1750	0.46	+0.5
1,927,550	-		PfGW456L13_1750	0.56	-1.4
1,927,589	+		PfGW456L13_1750	0.72	-0.5
1,927,589	+		PfGW456L13_1750	0.72	-0.7
1,927,590	-		PfGW456L13_1750	0.72	-1.7
1,927,663	+				-0.9
1,927,663	+				-1.0
1,927,664	-				-0.0
1,927,664	-				+0.3
1,927,664	-				+0.7
1,927,664	-				+1.4
1,927,664	-				-0.2
1,927,664	-				-1.0
1,927,676	+				+2.2
1,927,676	+				+1.4
1,927,676	+				-0.4
1,927,676	+				-0.0
1,927,676	+				+0.6
1,927,676	+				+0.4
1,927,676	+				+0.8
1,927,677	-				+1.8
1,927,677	-				+0.0
1,927,677	-				-0.1
1,927,677	-				+0.2
1,927,677	-				+0.1
1,927,677	-				-0.6
1,927,926	+				+0.3
1,927,928	+				+1.7
1,927,928	+				+0.7
1,927,929	-				+0.5
1,927,997	+				-0.4
1,927,997	+				-0.1
1,927,997	+				-0.0
1,927,998	-				-0.2
1,928,152	+				+0.7