Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1642

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
1,801,525	-				+0.8
1,801,525	-				+2.1
1,801,525	-				-1.0
1,801,525	-				-0.9
1,801,525	-				+0.1
1,801,525	-				-0.7
1,801,591	-				-2.2
1,801,638	-				-0.8
1,801,726	-		PfGW456L13_1641	0.30	-0.2
1,801,726	-		PfGW456L13_1641	0.30	-0.9
1,801,728	+		PfGW456L13_1641	0.31	-1.4
1,801,729	-		PfGW456L13_1641	0.31	-0.6
1,801,729	-		PfGW456L13_1641	0.31	+1.5
1,801,729	-		PfGW456L13_1641	0.31	+0.1
1,801,729	-		PfGW456L13_1641	0.31	+0.8
1,801,729	-		PfGW456L13_1641	0.31	-0.3
1,801,729	-		PfGW456L13_1641	0.31	+0.3
1,801,827	-		PfGW456L13_1641	0.58	+0.2
1,801,827	-		PfGW456L13_1641	0.58	-1.3
1,801,827	-		PfGW456L13_1641	0.58	-1.3
1,801,830	-		PfGW456L13_1641	0.59	-3.1
1,801,830	-		PfGW456L13_1641	0.59	-2.6
1,801,830	-		PfGW456L13_1641	0.59	+0.1
1,801,830	-		PfGW456L13_1641	0.59	-0.6
1,801,830	-		PfGW456L13_1641	0.59	-1.4
1,801,830	-		PfGW456L13_1641	0.59	+0.3
1,801,835	-		PfGW456L13_1641	0.60	-2.0
1,801,845	-				+2.3
1,801,845	-		PfGW456L13_1641	0.63	-0.3
1,801,873	+		PfGW456L13_1641	0.71	+0.4
1,802,035	+				-2.4
1,802,035	+				-0.9
1,802,035	+				+1.6
1,802,036	-				-2.5
1,802,145	-				-1.0
1,802,165	+		PfGW456L13_1642	0.10	-0.0
1,802,221	+		PfGW456L13_1642	0.13	-0.7
1,802,285	+		PfGW456L13_1642	0.17	-2.0
1,802,285	+		PfGW456L13_1642	0.17	-2.4
1,802,286	-		PfGW456L13_1642	0.17	-2.4
1,802,286	-		PfGW456L13_1642	0.17	-3.8
1,802,330	+		PfGW456L13_1642	0.19	-0.4
1,802,351	+		PfGW456L13_1642	0.21	-2.4
1,802,352	-		PfGW456L13_1642	0.21	-1.3
1,802,352	-		PfGW456L13_1642	0.21	-0.8
1,802,762	+		PfGW456L13_1642	0.43	-0.4
1,802,957	+		PfGW456L13_1642	0.54	-0.7
1,802,957	+		PfGW456L13_1642	0.54	+0.4
1,803,422	+		PfGW456L13_1642	0.80	-0.9
1,803,422	+		PfGW456L13_1642	0.80	-1.5
1,803,422	+		PfGW456L13_1642	0.80	-1.4
1,803,422	+		PfGW456L13_1642	0.80	-1.0
1,803,422	+		PfGW456L13_1642	0.80	-1.9
1,803,423	-		PfGW456L13_1642	0.80	-1.9
1,803,423	-		PfGW456L13_1642	0.80	-3.0
1,803,423	-		PfGW456L13_1642	0.80	-2.2
1,803,423	-		PfGW456L13_1642	0.80	-0.4
1,803,591	-		PfGW456L13_1642	0.89	-1.6
1,803,791	+				-3.0
1,803,791	+				-2.6
1,803,791	+				-0.8
1,803,791	+				-1.6
1,803,792	-				-0.9
1,803,792	-				-0.0
1,803,792	-				-0.5
1,803,792	-				-2.4
1,803,792	-				-0.2
1,803,792	-				-1.2
1,803,792	-				-2.2
1,803,792	-				-0.6
1,803,804	+				-0.4
1,803,805	-				-0.2
1,803,830	+				-2.2
1,803,858	+				-0.5
1,803,858	+				-0.2
1,803,859	-				-2.0
1,803,880	+				-1.1
1,803,880	+				+0.1
1,803,880	+				-1.9
1,803,881	-				-1.8
1,803,881	-				-0.4
1,803,881	-				+0.8
1,803,889	+				+0.2
1,803,889	+				-1.2
1,803,889	+				-0.0
1,803,889	+				-1.7
1,803,889	+				-1.2
1,803,890	-				-0.3
1,803,890	-				-0.7
1,803,890	-				-0.6
1,803,890	-				-1.4
1,803,890	-				-0.6
1,803,922	+				-0.0
1,803,923	-				-1.3
1,803,964	-				-1.3
1,804,042	+				-0.4
1,804,042	+				-0.5
1,804,042	+				-0.6
1,804,042	+				+0.5
1,804,042	+				-0.1
1,804,042	+				+1.0
1,804,042	+				+0.1
1,804,042	+				+1.4
1,804,043	-				-0.6
1,804,043	-				-1.4
1,804,043	-				+1.0
1,804,043	-				-1.0
1,804,043	-				-0.2
1,804,221	+		PfGW456L13_1643	0.25	+0.2
1,804,221	+		PfGW456L13_1643	0.25	+0.0
1,804,222	-		PfGW456L13_1643	0.25	+2.5
1,804,230	+		PfGW456L13_1643	0.26	+0.8
1,804,231	-		PfGW456L13_1643	0.26	+0.4
1,804,341	+		PfGW456L13_1643	0.39	-0.0
1,804,341	+		PfGW456L13_1643	0.39	+0.8
1,804,341	+		PfGW456L13_1643	0.39	+1.0
1,804,342	-		PfGW456L13_1643	0.39	-1.6
1,804,346	+		PfGW456L13_1643	0.40	-0.5
1,804,346	+		PfGW456L13_1643	0.40	+2.3
1,804,347	-		PfGW456L13_1643	0.40	-1.3
1,804,418	+		PfGW456L13_1643	0.48	-0.5
1,804,418	+		PfGW456L13_1643	0.48	+0.5
1,804,419	-		PfGW456L13_1643	0.48	-0.8
1,804,475	+		PfGW456L13_1643	0.54	-0.1
1,804,475	+		PfGW456L13_1643	0.54	+0.4
1,804,504	+		PfGW456L13_1643	0.58	+0.6
1,804,504	+		PfGW456L13_1643	0.58	-1.9
1,804,505	-		PfGW456L13_1643	0.58	+0.3
1,804,505	-		PfGW456L13_1643	0.58	+0.1
1,804,688	+		PfGW456L13_1643	0.79	+1.2
1,804,688	+		PfGW456L13_1643	0.79	+3.3