Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1628

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
1,790,245	-				-0.1
1,790,336	+				+2.5
1,790,337	-				-0.6
1,790,347	+				-3.1
1,790,347	+				-1.9
1,790,348	-				-0.8
1,790,523	+		PfGW456L13_1628	0.17	-2.6
1,790,524	-		PfGW456L13_1628	0.17	-2.9
1,790,524	-		PfGW456L13_1628	0.17	-1.4
1,790,539	+		PfGW456L13_1628	0.18	-0.6
1,790,556	+		PfGW456L13_1628	0.20	-1.2
1,790,556	+		PfGW456L13_1628	0.20	-1.4
1,790,556	+		PfGW456L13_1628	0.20	-2.6
1,790,556	+		PfGW456L13_1628	0.20	-2.2
1,790,557	-		PfGW456L13_1628	0.20	-0.1
1,790,557	-		PfGW456L13_1628	0.20	-0.4
1,790,557	-		PfGW456L13_1628	0.20	-0.9
1,790,557	-		PfGW456L13_1628	0.20	-0.1
1,790,557	-		PfGW456L13_1628	0.20	-0.6
1,790,557	-		PfGW456L13_1628	0.20	-2.4
1,790,844	+		PfGW456L13_1628	0.46	-1.9
1,790,845	-		PfGW456L13_1628	0.46	-1.1
1,790,845	-		PfGW456L13_1628	0.46	-2.6
1,790,845	-		PfGW456L13_1628	0.46	-1.4
1,790,845	-		PfGW456L13_1628	0.46	-1.5
1,791,168	+		PfGW456L13_1628	0.76	-0.2
1,791,168	+		PfGW456L13_1628	0.76	-1.2
1,791,279	+		PfGW456L13_1628	0.86	-1.6
1,791,279	+		PfGW456L13_1628	0.86	-1.7
1,791,333	+				-1.1
1,791,333	+				-3.1
1,791,429	+				-0.9
1,791,429	+				+0.6
1,791,430	-				-0.4
1,791,555	+				-0.8
1,791,556	-				-1.4
1,791,615	+				+0.5
1,791,615	+				-1.2
1,791,615	+				-1.3
1,791,615	+				+1.1
1,791,615	+				-0.2
1,791,615	+				+0.0
1,791,616	-				-2.4
1,791,616	-				-0.1
1,791,616	-				+1.7
1,791,616	-				-0.2
1,791,616	-				-0.3
1,791,616	-				+0.2
1,791,616	-				-0.5
1,791,627	+				+0.3
1,791,717	+				-0.5
1,791,729	+		PfGW456L13_1629	0.10	-2.1
1,791,730	-		PfGW456L13_1629	0.10	+0.3
1,791,730	-		PfGW456L13_1629	0.10	+1.1
1,791,730	-		PfGW456L13_1629	0.10	+0.9
1,791,804	+		PfGW456L13_1629	0.18	-0.1
1,791,804	+		PfGW456L13_1629	0.18	-0.6
1,791,804	+		PfGW456L13_1629	0.18	+0.9
1,791,804	+		PfGW456L13_1629	0.18	-0.5
1,791,804	+		PfGW456L13_1629	0.18	-3.6
1,791,805	-		PfGW456L13_1629	0.18	-1.4
1,791,805	-		PfGW456L13_1629	0.18	-0.1
1,791,996	+		PfGW456L13_1629	0.37	-0.2
1,791,996	+		PfGW456L13_1629	0.37	+1.5
1,791,996	+		PfGW456L13_1629	0.37	+0.3
1,791,996	+		PfGW456L13_1629	0.37	+0.3
1,791,996	+		PfGW456L13_1629	0.37	-0.1
1,791,996	+				+0.4
1,791,997	-		PfGW456L13_1629	0.37	+1.8
1,791,997	-		PfGW456L13_1629	0.37	-0.3
1,791,997	-		PfGW456L13_1629	0.37	-0.1
1,792,014	+		PfGW456L13_1629	0.39	-0.4
1,792,015	-		PfGW456L13_1629	0.39	-1.5
1,792,015	-		PfGW456L13_1629	0.39	-0.3
1,792,074	+		PfGW456L13_1629	0.45	-0.5
1,792,074	+		PfGW456L13_1629	0.45	-1.2
1,792,074	+		PfGW456L13_1629	0.45	+0.2
1,792,074	+		PfGW456L13_1629	0.45	+0.4
1,792,074	+		PfGW456L13_1629	0.45	-0.1
1,792,075	-		PfGW456L13_1629	0.45	+0.3
1,792,075	-		PfGW456L13_1629	0.45	-0.9
1,792,075	-		PfGW456L13_1629	0.45	-1.2
1,792,075	-		PfGW456L13_1629	0.45	-0.3
1,792,075	-		PfGW456L13_1629	0.45	+1.1
1,792,075	-		PfGW456L13_1629	0.45	+0.7
1,792,075	-		PfGW456L13_1629	0.45	+0.4
1,792,075	-				-1.1
1,792,075	-		PfGW456L13_1629	0.45	-0.7
1,792,075	-		PfGW456L13_1629	0.45	-0.1
1,792,080	+		PfGW456L13_1629	0.46	+0.3
1,792,080	+		PfGW456L13_1629	0.46	-0.1
1,792,080	+		PfGW456L13_1629	0.46	-2.4
1,792,080	+		PfGW456L13_1629	0.46	-0.2
1,792,080	+		PfGW456L13_1629	0.46	-0.9
1,792,080	+		PfGW456L13_1629	0.46	+0.1
1,792,080	+		PfGW456L13_1629	0.46	+0.3
1,792,080	+		PfGW456L13_1629	0.46	-0.3
1,792,080	+		PfGW456L13_1629	0.46	+0.2
1,792,081	-		PfGW456L13_1629	0.46	-2.4
1,792,081	-		PfGW456L13_1629	0.46	-1.1
1,792,081	-		PfGW456L13_1629	0.46	+0.7
1,792,117	-		PfGW456L13_1629	0.49	+0.4
1,792,117	-		PfGW456L13_1629	0.49	-0.8
1,792,203	+		PfGW456L13_1629	0.58	+0.8
1,792,204	-		PfGW456L13_1629	0.58	-0.3