Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1562

Experiment: Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.5 mg/ml
1,722,754	+				-0.6
1,722,755	-				+0.6
1,722,755	-				-0.3
1,722,755	-				+0.0
1,722,880	+		PfGW456L13_1561	0.20	-0.1
1,723,000	+		PfGW456L13_1561	0.34	+0.4
1,723,000	+		PfGW456L13_1561	0.34	+0.8
1,723,000	+		PfGW456L13_1561	0.34	-1.6
1,723,000	+		PfGW456L13_1561	0.34	-1.4
1,723,001	-		PfGW456L13_1561	0.34	+0.7
1,723,027	+		PfGW456L13_1561	0.37	+0.2
1,723,027	+		PfGW456L13_1561	0.37	+2.0
1,723,027	+		PfGW456L13_1561	0.37	+0.4
1,723,028	-		PfGW456L13_1561	0.38	+1.3
1,723,028	-		PfGW456L13_1561	0.38	+0.2
1,723,249	+		PfGW456L13_1561	0.64	+0.6
1,723,249	+		PfGW456L13_1561	0.64	+0.2
1,723,249	+		PfGW456L13_1561	0.64	+0.5
1,723,249	+		PfGW456L13_1561	0.64	-0.3
1,723,249	+		PfGW456L13_1561	0.64	-0.0
1,723,249	+		PfGW456L13_1561	0.64	+0.3
1,723,249	+		PfGW456L13_1561	0.64	+0.2
1,723,249	+		PfGW456L13_1561	0.64	+1.4
1,723,250	-		PfGW456L13_1561	0.64	-3.0
1,723,250	-		PfGW456L13_1561	0.64	-0.6
1,723,250	-		PfGW456L13_1561	0.64	+0.4
1,723,250	-		PfGW456L13_1561	0.64	-1.0
1,723,402	+		PfGW456L13_1561	0.82	-1.4
1,723,402	+		PfGW456L13_1561	0.82	+0.9
1,723,402	+		PfGW456L13_1561	0.82	+0.4
1,723,402	+		PfGW456L13_1561	0.82	-1.5
1,723,402	+		PfGW456L13_1561	0.82	+0.3
1,723,402	+		PfGW456L13_1561	0.82	+0.6
1,723,402	+		PfGW456L13_1561	0.82	+0.2
1,723,403	-		PfGW456L13_1561	0.82	+0.6
1,723,403	-		PfGW456L13_1561	0.82	+0.1
1,723,403	-		PfGW456L13_1561	0.82	+0.4
1,723,403	-		PfGW456L13_1561	0.82	-0.2
1,723,403	-		PfGW456L13_1561	0.82	+1.7
1,723,403	-		PfGW456L13_1561	0.82	-0.5
1,723,403	-		PfGW456L13_1561	0.82	-0.2
1,723,403	-		PfGW456L13_1561	0.82	-0.0
1,723,462	-		PfGW456L13_1561	0.89	+0.1
1,723,510	+				-0.3
1,723,511	-				+0.3
1,723,511	-				+0.4
1,723,511	-				+0.6
1,723,511	-				+1.0
1,723,511	-				+0.4
1,723,511	-				-0.4
1,723,511	-				-0.0
1,723,601	+				-0.1
1,723,601	+				-2.4
1,723,601	+				+0.7
1,723,602	-				-0.0
1,723,602	-				+0.9
1,723,602	-				+0.1
1,723,602	-				-1.3
1,723,602	-				+0.6
1,723,602	-				+0.4
1,723,602	-				-0.7
1,723,624	+				-1.3
1,723,624	+				-0.8
1,723,625	-				-0.8
1,723,625	-				-0.0
1,723,664	+				+0.9
1,723,665	-				-1.6
1,724,146	+		PfGW456L13_1562	0.42	+0.5
1,724,147	-		PfGW456L13_1562	0.42	-1.7
1,724,274	+		PfGW456L13_1562	0.54	-1.2
1,724,296	+		PfGW456L13_1562	0.56	-0.5
1,724,297	-		PfGW456L13_1562	0.56	+1.9
1,724,446	+		PfGW456L13_1562	0.69	+0.4
1,724,446	+		PfGW456L13_1562	0.69	-1.0
1,724,446	+		PfGW456L13_1562	0.69	-1.2
1,724,446	+		PfGW456L13_1562	0.69	-0.3
1,724,447	-		PfGW456L13_1562	0.69	-0.5
1,724,447	-		PfGW456L13_1562	0.69	+0.0
1,724,447	-		PfGW456L13_1562	0.69	-0.6
1,724,447	-		PfGW456L13_1562	0.69	-2.3
1,724,447	-		PfGW456L13_1562	0.69	-0.8
1,724,447	-		PfGW456L13_1562	0.69	-2.1
1,724,447	-		PfGW456L13_1562	0.69	+0.1
1,724,453	-		PfGW456L13_1562	0.70	-0.1
1,724,453	-		PfGW456L13_1562	0.70	+0.2
1,724,464	+		PfGW456L13_1562	0.71	-0.3
1,724,464	+		PfGW456L13_1562	0.71	+0.2
1,724,464	+		PfGW456L13_1562	0.71	-0.6
1,724,464	+		PfGW456L13_1562	0.71	+1.1
1,724,464	+		PfGW456L13_1562	0.71	+0.2
1,724,464	+		PfGW456L13_1562	0.71	-0.3
1,724,465	-		PfGW456L13_1562	0.71	+1.3
1,724,465	-		PfGW456L13_1562	0.71	-1.0
1,724,465	-		PfGW456L13_1562	0.71	+0.8
1,724,562	-		PfGW456L13_1562	0.80	-0.4
1,724,669	-		PfGW456L13_1562	0.90	+0.4
1,724,701	+				+0.4
1,724,701	+				+1.4
1,724,701	+				-2.0
1,724,702	-				+0.5
1,724,702	-				-0.0
1,724,793	+				-0.7
1,724,794	-				+1.6
1,724,794	-				-1.2
1,724,838	+				+0.4
1,724,838	+				+1.0
1,725,120	+		PfGW456L13_1563	0.15	+0.7
1,725,120	+		PfGW456L13_1563	0.15	+1.7
1,725,124	+		PfGW456L13_1563	0.15	-0.7
1,725,124	+		PfGW456L13_1563	0.15	-0.3
1,725,124	+		PfGW456L13_1563	0.15	-0.0
1,725,124	+		PfGW456L13_1563	0.15	+0.5
1,725,125	-		PfGW456L13_1563	0.15	+1.1
1,725,125	-		PfGW456L13_1563	0.15	-2.8
1,725,125	-		PfGW456L13_1563	0.15	-0.2
1,725,125	-		PfGW456L13_1563	0.15	-0.3
1,725,125	-		PfGW456L13_1563	0.15	+0.5
1,725,125	-		PfGW456L13_1563	0.15	+0.1
1,725,125	-				+2.0
1,725,125	-		PfGW456L13_1563	0.15	+0.1
1,725,439	+		PfGW456L13_1563	0.32	-0.9
1,725,440	-		PfGW456L13_1563	0.33	-0.6
1,725,440	-		PfGW456L13_1563	0.33	+0.8
1,725,523	+		PfGW456L13_1563	0.37	+0.6
1,725,523	+		PfGW456L13_1563	0.37	+0.1
1,725,576	+		PfGW456L13_1563	0.40	-0.0
1,725,577	-		PfGW456L13_1563	0.40	+1.3
1,725,580	+		PfGW456L13_1563	0.40	-0.4
1,725,580	+		PfGW456L13_1563	0.40	-0.6
1,725,580	+		PfGW456L13_1563	0.40	+0.2
1,725,580	+		PfGW456L13_1563	0.40	-0.6
1,725,580	+		PfGW456L13_1563	0.40	+0.5
1,725,580	+		PfGW456L13_1563	0.40	-0.8
1,725,581	-		PfGW456L13_1563	0.40	+0.5
1,725,581	-		PfGW456L13_1563	0.40	-0.5