Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4173

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
4,988,904	-				+1.0
4,988,904	-				+0.1
4,988,904	-				-1.9
4,988,904	-				+0.8
4,988,959	-				+0.3
4,988,965	+				-0.9
4,988,966	-				-0.9
4,988,966	-				-1.2
4,988,970	+				+1.6
4,988,987	-				-0.1
4,988,990	+				-0.7
4,988,990	+				-1.0
4,988,990	+				+0.6
4,988,990	+				+1.1
4,988,991	-				+0.8
4,988,994	+				-0.9
4,988,995	-				+0.2
4,989,057	+				+0.1
4,989,100	-				+0.2
4,989,100	-				+0.3
4,989,103	+				-0.2
4,989,104	-				-1.0
4,989,104	-				-1.8
4,989,152	-				-0.9
4,989,156	-				+0.8
4,989,165	-				-0.7
4,989,165	-				-2.1
4,989,168	+				-0.3
4,989,168	+				-0.8
4,989,169	-				+2.8
4,989,170	+				+0.4
4,989,170	+				-1.1
4,989,170	+				-0.1
4,989,171	-				+0.3
4,989,171	-				-0.1
4,989,172	+				+0.7
4,989,179	+				+1.6
4,989,219	+		Echvi_4171	0.39	-0.6
4,989,219	+		Echvi_4171	0.39	+1.2
4,989,220	-		Echvi_4171	0.40	-0.1
4,989,223	+		Echvi_4171	0.43	+0.8
4,989,247	-		Echvi_4171	0.66	-0.5
4,989,249	+		Echvi_4171	0.68	+0.6
4,989,250	-		Echvi_4171	0.69	+0.1
4,989,250	-		Echvi_4171	0.69	-0.6
4,989,253	+		Echvi_4171	0.71	-0.6
4,989,254	-		Echvi_4171	0.72	-0.3
4,989,280	-				+1.0
4,989,357	+				-0.9
4,989,410	-				+0.5
4,989,425	+				-3.0
4,989,425	+				+0.3
4,989,426	-				-0.3
4,989,426	-				-0.5
4,989,427	+				-0.4
4,989,428	-				-0.0
4,989,428	-				-0.2
4,989,483	-		Echvi_4172	0.16	-0.7
4,989,553	-		Echvi_4172	0.30	-0.1
4,989,571	-		Echvi_4172	0.34	+0.9
4,989,601	+		Echvi_4172	0.40	-0.6
4,989,601	+		Echvi_4172	0.40	+0.1
4,989,604	+		Echvi_4172	0.41	-2.9
4,989,710	+		Echvi_4172	0.63	+0.4
4,989,711	-		Echvi_4172	0.63	+2.4
4,989,711	-		Echvi_4172	0.63	-0.6
4,989,711	-		Echvi_4172	0.63	-0.0
4,989,711	-		Echvi_4172	0.63	-2.2
4,989,711	-		Echvi_4172	0.63	-0.1
4,989,713	+		Echvi_4172	0.63	+0.8
4,989,714	-		Echvi_4172	0.63	-1.6
4,989,714	-		Echvi_4172	0.63	-1.0
4,989,739	+		Echvi_4172	0.69	-3.0
4,989,739	+		Echvi_4172	0.69	+0.4
4,989,815	+		Echvi_4172	0.84	+1.9
4,989,816	-		Echvi_4172	0.84	-1.0
4,989,841	-		Echvi_4172	0.90	+0.4
4,989,844	-				-2.7
4,989,852	+				-0.5
4,989,919	-				+0.2
4,989,934	+				-0.0
4,989,934	+				-1.3
4,989,934	+				-0.9
4,989,935	-				-0.9
4,989,935	-				+0.8
4,989,935	-				-1.1
4,989,940	+				-1.8
4,989,941	-				-0.8
4,989,996	-				-0.5
4,990,054	+		Echvi_4173	0.14	+0.1
4,990,054	+		Echvi_4173	0.14	+0.8
4,990,056	+		Echvi_4173	0.15	+0.4
4,990,056	+		Echvi_4173	0.15	+0.0
4,990,056	+		Echvi_4173	0.15	-0.3
4,990,057	-		Echvi_4173	0.15	+1.3
4,990,057	-		Echvi_4173	0.15	-0.8
4,990,059	+		Echvi_4173	0.15	-0.6
4,990,059	+		Echvi_4173	0.15	+0.5
4,990,059	+		Echvi_4173	0.15	+0.6
4,990,059	+		Echvi_4173	0.15	+0.2
4,990,059	+		Echvi_4173	0.15	+0.1
4,990,059	+		Echvi_4173	0.15	+0.1
4,990,060	-		Echvi_4173	0.15	+1.2
4,990,060	-		Echvi_4173	0.15	-1.0
4,990,060	-		Echvi_4173	0.15	-0.1
4,990,063	+		Echvi_4173	0.15	+0.4
4,990,162	+		Echvi_4173	0.25	-1.6
4,990,163	-		Echvi_4173	0.25	-1.5
4,990,164	+		Echvi_4173	0.25	+0.4
4,990,165	-		Echvi_4173	0.25	-0.8
4,990,203	+		Echvi_4173	0.28	+0.0
4,990,206	+		Echvi_4173	0.29	+0.1
4,990,207	-		Echvi_4173	0.29	-0.1
4,990,207	-		Echvi_4173	0.29	+1.0
4,990,207	-		Echvi_4173	0.29	+0.8
4,990,207	-		Echvi_4173	0.29	+0.5
4,990,207	-		Echvi_4173	0.29	-0.1
4,990,210	+		Echvi_4173	0.29	-0.4
4,990,210	+		Echvi_4173	0.29	+1.9
4,990,210	+		Echvi_4173	0.29	+0.8
4,990,210	+				+0.6
4,990,210	+		Echvi_4173	0.29	-0.2
4,990,212	+		Echvi_4173	0.29	-0.1
4,990,213	-		Echvi_4173	0.29	-0.1
4,990,213	-		Echvi_4173	0.29	+0.8
4,990,213	-		Echvi_4173	0.29	+0.2
4,990,213	-		Echvi_4173	0.29	+0.4
4,990,273	+		Echvi_4173	0.35	-0.3
4,990,287	+		Echvi_4173	0.36	+0.1
4,990,287	+		Echvi_4173	0.36	+0.7
4,990,287	+		Echvi_4173	0.36	-0.1
4,990,288	-		Echvi_4173	0.36	-0.6
4,990,411	+		Echvi_4173	0.48	-1.1
4,990,412	-		Echvi_4173	0.48	+0.1
4,990,499	+		Echvi_4173	0.56	+1.6
4,990,555	+		Echvi_4173	0.62	+1.4
4,990,578	-		Echvi_4173	0.64	-1.6
4,990,578	-		Echvi_4173	0.64	+0.4
4,990,579	+		Echvi_4173	0.64	+0.9
4,990,579	+		Echvi_4173	0.64	-0.1
4,990,580	-		Echvi_4173	0.64	-0.8
4,990,640	+		Echvi_4173	0.70	+0.5
4,990,641	-		Echvi_4173	0.70	-0.1
4,990,641	-		Echvi_4173	0.70	-1.0
4,990,642	+		Echvi_4173	0.70	+1.2
4,990,643	-		Echvi_4173	0.70	-2.1
4,990,643	-		Echvi_4173	0.70	-0.0
4,990,643	-		Echvi_4173	0.70	-0.5
4,990,643	-		Echvi_4173	0.70	-0.8
4,990,645	-		Echvi_4173	0.70	+0.5
4,990,671	+		Echvi_4173	0.73	+1.5
4,990,672	-		Echvi_4173	0.73	+1.3
4,990,715	+		Echvi_4173	0.77	-1.7
4,990,715	+		Echvi_4173	0.77	+0.6
4,990,717	+		Echvi_4173	0.77	-0.7
4,990,717	+		Echvi_4173	0.77	+0.4
4,990,717	+		Echvi_4173	0.77	+1.3
4,990,717	+		Echvi_4173	0.77	+0.7
4,990,718	-		Echvi_4173	0.77	-2.1
4,990,718	-		Echvi_4173	0.77	-0.4
4,990,718	-		Echvi_4173	0.77	-2.1
4,990,718	-		Echvi_4173	0.77	-1.2
4,990,721	+		Echvi_4173	0.77	-0.5
4,990,721	+		Echvi_4173	0.77	-0.2
4,990,762	+		Echvi_4173	0.81	+0.8
4,990,763	-		Echvi_4173	0.81	+2.2
4,990,763	-		Echvi_4173	0.81	-0.2
4,990,763	-		Echvi_4173	0.81	-1.3
4,990,763	-		Echvi_4173	0.81	+0.8
4,990,764	+		Echvi_4173	0.81	+1.6
4,990,765	-		Echvi_4173	0.81	+1.1
4,990,793	+		Echvi_4173	0.84	-1.0
4,990,814	+		Echvi_4173	0.86	+0.7
4,990,817	-		Echvi_4173	0.86	+0.0
4,990,817	-		Echvi_4173	0.86	+0.3
4,990,817	-		Echvi_4173	0.86	-0.2
4,990,817	-		Echvi_4173	0.86	+2.6
4,990,821	-		Echvi_4173	0.87	-1.2
4,990,821	-		Echvi_4173	0.87	-0.1
4,990,821	-		Echvi_4173	0.87	+0.1
4,990,915	+				-1.6
4,990,935	-				+2.6
4,990,935	-				-0.5
4,990,938	-				-1.8
4,990,943	+				-0.5
4,990,943	+				+0.3
4,990,945	+				-1.1
4,990,946	-				+0.7
4,990,953	+				+1.3
4,991,003	+				+1.3
4,991,003	+				-1.6
4,991,035	-		Echvi_4174	0.13	-0.9
4,991,054	+		Echvi_4174	0.17	+0.5
4,991,055	-		Echvi_4174	0.18	-2.0
4,991,066	+		Echvi_4174	0.20	+0.2
4,991,066	+		Echvi_4174	0.20	+0.6
4,991,066	+		Echvi_4174	0.20	+1.7
4,991,071	+		Echvi_4174	0.21	+0.3
4,991,071	+		Echvi_4174	0.21	+0.6
4,991,125	+		Echvi_4174	0.32	-0.6
4,991,174	+		Echvi_4174	0.43	-1.3
4,991,195	+		Echvi_4174	0.47	-1.5
4,991,203	+		Echvi_4174	0.49	+0.2
4,991,204	-		Echvi_4174	0.49	-0.8
4,991,223	+		Echvi_4174	0.53	+1.3
4,991,224	-		Echvi_4174	0.53	+0.3
4,991,251	-		Echvi_4174	0.59	-0.2
4,991,271	+		Echvi_4174	0.63	+0.6
4,991,271	+		Echvi_4174	0.63	+1.2
4,991,272	-		Echvi_4174	0.63	-0.2
4,991,272	-		Echvi_4174	0.63	+0.3
4,991,272	-		Echvi_4174	0.63	-0.9
4,991,272	-		Echvi_4174	0.63	+3.0
4,991,309	-		Echvi_4174	0.71	-2.1
4,991,346	+		Echvi_4174	0.79	-0.0
4,991,347	-		Echvi_4174	0.79	+0.2
4,991,364	-		Echvi_4174	0.83	-0.5
4,991,423	-				-0.4
4,991,423	-				-0.2
4,991,427	+				+0.2
4,991,427	+				+0.8
4,991,428	-				+3.2
4,991,478	+				-0.0
4,991,494	+				-1.7
4,991,494	+				+0.8
4,991,495	-				+1.2
4,991,566	+		Echvi_4175	0.10	-0.3
4,991,572	+		Echvi_4175	0.11	-0.1
4,991,572	+		Echvi_4175	0.11	+0.3
4,991,573	-		Echvi_4175	0.11	-0.2
4,991,573	-		Echvi_4175	0.11	+0.7
4,991,594	+		Echvi_4175	0.13	-0.7
4,991,595	-		Echvi_4175	0.13	-0.9
4,991,656	-		Echvi_4175	0.19	-0.6
4,991,696	+		Echvi_4175	0.22	-0.1
4,991,697	-		Echvi_4175	0.23	+0.8
4,991,699	+		Echvi_4175	0.23	+0.7
4,991,700	-		Echvi_4175	0.23	-0.1
4,991,834	+		Echvi_4175	0.35	+0.6
4,991,834	+		Echvi_4175	0.35	-0.2
4,991,835	-		Echvi_4175	0.35	-0.1
4,991,853	+		Echvi_4175	0.37	+1.2
4,991,853	+		Echvi_4175	0.37	-0.2
4,991,909	-		Echvi_4175	0.42	-2.5
4,991,912	-		Echvi_4175	0.43	+0.2
4,991,958	+		Echvi_4175	0.47	-0.4
4,991,959	-		Echvi_4175	0.47	-1.8
4,991,959	-		Echvi_4175	0.47	+2.2