Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3988

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
4,779,651	+		Echvi_3987	0.22	+0.6
4,779,651	+		Echvi_3987	0.22	+0.8
4,779,651	+		Echvi_3987	0.22	+0.7
4,779,652	-		Echvi_3987	0.22	-0.0
4,779,653	+		Echvi_3987	0.22	-3.0
4,779,654	-		Echvi_3987	0.22	-0.1
4,779,654	-		Echvi_3987	0.22	+0.6
4,779,684	+		Echvi_3987	0.25	+0.6
4,779,729	+		Echvi_3987	0.29	+0.3
4,779,730	-		Echvi_3987	0.29	+1.5
4,779,732	-		Echvi_3987	0.29	-2.2
4,779,858	-		Echvi_3987	0.40	-0.1
4,779,858	-		Echvi_3987	0.40	-0.2
4,779,899	+		Echvi_3987	0.44	-1.5
4,779,899	+		Echvi_3987	0.44	+0.5
4,779,899	+		Echvi_3987	0.44	-0.8
4,779,899	+		Echvi_3987	0.44	+2.2
4,779,899	+		Echvi_3987	0.44	+0.4
4,779,900	-		Echvi_3987	0.44	+0.2
4,779,902	+		Echvi_3987	0.44	+0.3
4,779,903	-		Echvi_3987	0.44	+0.2
4,779,903	-		Echvi_3987	0.44	+0.7
4,779,903	-		Echvi_3987	0.44	-0.6
4,779,941	+		Echvi_3987	0.48	-2.9
4,779,965	+		Echvi_3987	0.50	-1.0
4,780,005	+		Echvi_3987	0.53	+0.4
4,780,052	+		Echvi_3987	0.58	-0.1
4,780,052	+		Echvi_3987	0.58	-0.3
4,780,319	+		Echvi_3987	0.81	+1.2
4,780,319	+		Echvi_3987	0.81	-0.4
4,780,320	-		Echvi_3987	0.81	+0.0
4,780,320	-		Echvi_3987	0.81	-1.6
4,780,397	+		Echvi_3987	0.88	-0.8
4,780,398	-		Echvi_3987	0.88	-0.1
4,780,398	-		Echvi_3987	0.88	-1.0
4,780,512	+				-1.3
4,780,514	+				+0.8
4,780,533	+				+0.3
4,780,533	+				-0.3
4,780,534	-				+1.3
4,780,534	-				-2.2
4,780,564	+				-2.6
4,780,629	+				-0.8
4,780,629	+				-0.1
4,780,633	+				-0.4
4,780,633	+				+1.5
4,780,633	+				+1.3
4,780,634	-				+1.9
4,780,634	-				+0.6
4,780,665	+				-0.2
4,780,794	+		Echvi_3988	0.14	-0.6
4,780,794	+		Echvi_3988	0.14	+0.5
4,780,795	-		Echvi_3988	0.14	+1.3
4,780,795	-		Echvi_3988	0.14	+0.6
4,780,960	+		Echvi_3988	0.24	+1.0
4,780,961	-		Echvi_3988	0.24	+2.2
4,780,981	+		Echvi_3988	0.26	-2.1
4,780,995	+		Echvi_3988	0.26	-1.6
4,780,995	+		Echvi_3988	0.26	+0.4
4,780,995	+		Echvi_3988	0.26	-0.8
4,780,996	-		Echvi_3988	0.27	-1.7
4,781,053	+		Echvi_3988	0.30	+1.6
4,781,053	+		Echvi_3988	0.30	-1.9
4,781,056	+		Echvi_3988	0.30	-0.4
4,781,134	+		Echvi_3988	0.35	-0.4
4,781,135	+		Echvi_3988	0.35	+1.0
4,781,135	-		Echvi_3988	0.35	+0.2
4,781,135	-		Echvi_3988	0.35	-0.3
4,781,135	-		Echvi_3988	0.35	+2.2
4,781,135	-		Echvi_3988	0.35	-1.1
4,781,170	+		Echvi_3988	0.37	-0.8
4,781,171	-		Echvi_3988	0.37	+1.6
4,781,172	+		Echvi_3988	0.37	+0.3
4,781,172	+		Echvi_3988	0.37	-0.3
4,781,172	+		Echvi_3988	0.37	-1.5
4,781,172	+		Echvi_3988	0.37	+0.1
4,781,172	+		Echvi_3988	0.37	-0.4
4,781,173	-		Echvi_3988	0.37	-0.1
4,781,173	-		Echvi_3988	0.37	-0.8
4,781,173	-		Echvi_3988	0.37	-1.5
4,781,173	-		Echvi_3988	0.37	-2.0
4,781,173	-		Echvi_3988	0.37	-0.1
4,781,386	+		Echvi_3988	0.50	+0.4
4,781,386	+		Echvi_3988	0.50	-1.4
4,781,402	+		Echvi_3988	0.51	-1.1
4,781,432	+		Echvi_3988	0.53	-1.5
4,781,432	+		Echvi_3988	0.53	-0.7
4,781,465	-		Echvi_3988	0.55	-0.2
4,781,533	+		Echvi_3988	0.59	+1.9
4,781,664	+		Echvi_3988	0.67	-1.1
4,781,665	-		Echvi_3988	0.68	-1.1
4,781,712	+		Echvi_3988	0.70	+2.0
4,781,712	+		Echvi_3988	0.70	-0.6
4,781,712	+		Echvi_3988	0.70	-0.4
4,781,727	+		Echvi_3988	0.71	+0.1
4,781,728	-		Echvi_3988	0.71	+0.2
4,781,728	-		Echvi_3988	0.71	-2.5
4,781,770	+		Echvi_3988	0.74	-1.0
4,781,771	-		Echvi_3988	0.74	+1.3
4,781,853	+		Echvi_3988	0.79	-0.3
4,781,861	+		Echvi_3988	0.80	-0.5
4,781,881	+		Echvi_3988	0.81	+0.1
4,781,882	-		Echvi_3988	0.81	-1.2
4,781,926	+		Echvi_3988	0.84	+0.5
4,781,926	+		Echvi_3988	0.84	+0.9
4,781,927	-		Echvi_3988	0.84	+0.2
4,781,927	-		Echvi_3988	0.84	-0.3
4,781,927	-		Echvi_3988	0.84	+0.4
4,781,930	+		Echvi_3988	0.84	-1.2
4,781,930	+		Echvi_3988	0.84	+0.0
4,781,930	+		Echvi_3988	0.84	-1.0
4,781,976	-		Echvi_3988	0.87	+2.4
4,781,977	+		Echvi_3988	0.87	+0.4
4,781,977	+		Echvi_3988	0.87	-0.4
4,781,977	+		Echvi_3988	0.87	-0.9
4,781,978	-		Echvi_3988	0.87	-0.5
4,781,984	+		Echvi_3988	0.87	+0.6
4,782,004	+		Echvi_3988	0.88	-0.2
4,782,005	-		Echvi_3988	0.88	+1.0
4,782,017	+		Echvi_3988	0.89	-0.3
4,782,018	-		Echvi_3988	0.89	+0.2
4,782,037	+				+1.2
4,782,083	-				+0.9
4,782,102	-				+1.6
4,782,173	+				-0.9
4,782,175	+				+0.2
4,782,237	+				-0.1
4,782,237	+				+0.2
4,782,237	+				-0.3
4,782,340	+				-1.0
4,782,363	+				-0.4
4,782,364	-				-1.1
4,782,415	+				+0.0
4,782,415	+				-0.6
4,782,417	+				-2.1
4,782,428	+				-1.3
4,782,428	+				+0.3
4,782,429	-				+1.4
4,782,429	-				+4.2
4,782,443	+				+0.3
4,782,444	-				-0.7
4,782,465	+				+1.3
4,782,465	+				+0.3
4,782,465	+				+1.0
4,782,465	+				+0.3
4,782,465	+				+0.0
4,782,466	-				-1.1
4,782,466	-				-0.1
4,782,490	+				+1.3
4,782,579	+		Echvi_3989	0.11	+0.5
4,782,579	+		Echvi_3989	0.11	+0.1
4,782,580	-		Echvi_3989	0.11	-1.0
4,782,595	-		Echvi_3989	0.12	+0.2
4,782,598	+		Echvi_3989	0.12	+0.5
4,782,598	+		Echvi_3989	0.12	-2.1
4,782,598	+		Echvi_3989	0.12	-0.2
4,782,698	-		Echvi_3989	0.15	+0.9
4,782,699	+		Echvi_3989	0.15	-0.1
4,782,699	+		Echvi_3989	0.15	+0.1
4,782,745	-		Echvi_3989	0.16	-0.8
4,782,748	+		Echvi_3989	0.16	-2.2
4,782,790	-		Echvi_3989	0.17	+0.5
4,782,884	+		Echvi_3989	0.20	-2.7
4,782,885	-		Echvi_3989	0.20	+1.8
4,782,885	-		Echvi_3989	0.20	-0.7
4,782,885	-		Echvi_3989	0.20	+1.3
4,782,889	-		Echvi_3989	0.20	-0.1
4,782,889	-		Echvi_3989	0.20	+0.6
4,782,927	-		Echvi_3989	0.21	+0.0
4,782,977	-		Echvi_3989	0.23	+0.2
4,783,010	-		Echvi_3989	0.24	-1.0
4,783,038	+		Echvi_3989	0.25	+2.2
4,783,138	+		Echvi_3989	0.28	-1.1
4,783,138	+		Echvi_3989	0.28	-3.1
4,783,139	-		Echvi_3989	0.28	+0.2
4,783,153	+		Echvi_3989	0.28	+0.0
4,783,154	-		Echvi_3989	0.28	+2.2