Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3294

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
3,895,643	+				+0.4
3,895,644	-				-2.0
3,895,682	+		Echvi_3292	0.17	-0.1
3,895,683	-		Echvi_3292	0.18	+0.6
3,895,822	-				+0.6
3,895,897	-				+1.5
3,895,915	+				-2.8
3,895,922	+				-1.8
3,895,923	-				-0.0
3,895,938	+				+0.1
3,895,942	+				+0.2
3,895,942	+				+0.4
3,895,942	+				+0.9
3,895,942	+				-1.1
3,895,942	+				-0.2
3,895,942	+				-0.9
3,895,942	+				+0.2
3,895,943	-				+0.8
3,895,943	-				+0.5
3,895,947	+				+0.6
3,895,947	+				+0.2
3,895,947	+				-0.5
3,895,951	+				-0.3
3,896,001	+		Echvi_3293	0.10	-0.5
3,896,021	+		Echvi_3293	0.14	+0.4
3,896,022	-		Echvi_3293	0.14	-0.0
3,896,028	+		Echvi_3293	0.15	+0.6
3,896,104	-		Echvi_3293	0.29	+1.4
3,896,105	+		Echvi_3293	0.29	-0.7
3,896,106	-		Echvi_3293	0.29	-0.5
3,896,106	-		Echvi_3293	0.29	+0.4
3,896,106	-		Echvi_3293	0.29	-0.4
3,896,123	-		Echvi_3293	0.32	+2.2
3,896,133	+		Echvi_3293	0.34	+0.2
3,896,133	+		Echvi_3293	0.34	+0.2
3,896,134	-		Echvi_3293	0.34	-0.6
3,896,170	+		Echvi_3293	0.41	+0.3
3,896,170	+		Echvi_3293	0.41	-0.0
3,896,171	-		Echvi_3293	0.41	+0.1
3,896,171	-		Echvi_3293	0.41	+1.3
3,896,171	-		Echvi_3293	0.41	-0.9
3,896,231	-		Echvi_3293	0.52	+1.2
3,896,276	-		Echvi_3293	0.60	-0.1
3,896,276	-		Echvi_3293	0.60	-0.8
3,896,277	+		Echvi_3293	0.60	+0.7
3,896,322	+		Echvi_3293	0.68	+1.6
3,896,333	-		Echvi_3293	0.70	-1.0
3,896,344	+		Echvi_3293	0.72	-0.9
3,896,396	-		Echvi_3293	0.81	+0.4
3,896,443	+		Echvi_3293	0.90	-1.9
3,896,443	+		Echvi_3293	0.90	-0.2
3,896,444	-		Echvi_3293	0.90	-0.1
3,896,444	-		Echvi_3293	0.90	+0.2
3,896,489	-				-1.4
3,896,498	+				-0.2
3,896,499	-				-1.7
3,896,499	-				-2.0
3,896,499	-				-1.3
3,896,518	+				-0.1
3,896,519	-				-1.3
3,896,558	+				+1.2
3,896,566	+				-0.8
3,896,566	+				+0.6
3,896,567	-				-0.8
3,896,567	-				-1.4
3,896,570	+				+0.3
3,896,571	-				-0.1
3,896,575	+				+0.4
3,896,575	+				+0.7
3,896,575	+				+0.8
3,896,599	-				+1.4
3,896,624	+				-0.4
3,896,624	+				-0.7
3,896,625	-				+0.3
3,896,670	+		Echvi_3294	0.11	-1.6
3,896,670	+		Echvi_3294	0.11	-0.3
3,896,670	+		Echvi_3294	0.11	-2.3
3,896,671	-		Echvi_3294	0.11	+0.5
3,896,708	+		Echvi_3294	0.15	-0.3
3,896,709	-		Echvi_3294	0.15	+0.1
3,896,754	+		Echvi_3294	0.20	-0.5
3,896,769	-		Echvi_3294	0.22	-1.1
3,896,819	-		Echvi_3294	0.27	+1.2
3,896,900	-		Echvi_3294	0.36	+0.5
3,896,991	+		Echvi_3294	0.47	+1.6
3,896,992	-		Echvi_3294	0.47	+2.0
3,897,096	-		Echvi_3294	0.58	-0.6
3,897,204	-		Echvi_3294	0.70	-0.9
3,897,255	+		Echvi_3294	0.76	-1.1
3,897,255	+		Echvi_3294	0.76	-1.1
3,897,255	+		Echvi_3294	0.76	-0.4
3,897,256	-				+1.2
3,897,256	-		Echvi_3294	0.76	-1.8
3,897,256	-		Echvi_3294	0.76	+0.2
3,897,256	-		Echvi_3294	0.76	-0.1
3,897,256	-		Echvi_3294	0.76	-1.0
3,897,256	-		Echvi_3294	0.76	-0.6
3,897,256	-		Echvi_3294	0.76	-1.0
3,897,324	-		Echvi_3294	0.83	-1.6
3,897,499	+				+0.2
3,897,500	-				-0.2
3,897,509	-				-1.9
3,897,509	-				+0.5
3,897,513	+				+1.6
3,897,513	+				+0.9
3,897,513	+				-0.2
3,897,513	+				-0.8
3,897,514	-				-0.4
3,897,514	-				+0.3
3,897,514	-				-0.8
3,897,514	-				+1.0
3,897,514	-				-1.2
3,897,552	-				+1.0
3,897,556	-				-0.1
3,897,556	-				-0.8
3,897,576	+				+0.4
3,897,577	-				-0.4
3,897,577	-				-0.6
3,897,577	-				-0.3
3,897,603	+				-0.4
3,897,624	+				+0.2
3,897,628	-				-0.2
3,897,651	-				-0.4
3,897,726	-		Echvi_3295	0.14	+0.3
3,897,752	+		Echvi_3295	0.18	+0.4
3,897,752	+		Echvi_3295	0.18	-1.0
3,897,763	+		Echvi_3295	0.19	-0.6
3,897,764	-		Echvi_3295	0.20	-0.4
3,897,764	-		Echvi_3295	0.20	+0.6
3,897,785	+		Echvi_3295	0.23	+1.0
3,897,785	+		Echvi_3295	0.23	+0.3
3,897,785	+		Echvi_3295	0.23	-0.8
3,897,785	+		Echvi_3295	0.23	-0.2
3,897,785	+		Echvi_3295	0.23	+0.3
3,897,785	+		Echvi_3295	0.23	-0.1
3,897,786	-		Echvi_3295	0.23	-0.0
3,897,786	-		Echvi_3295	0.23	+1.3
3,897,786	-		Echvi_3295	0.23	-0.4
3,897,809	+		Echvi_3295	0.27	-0.2
3,897,809	+		Echvi_3295	0.27	-1.4
3,897,809	+		Echvi_3295	0.27	-1.8
3,897,810	-		Echvi_3295	0.27	-0.6
3,897,810	-		Echvi_3295	0.27	+1.2
3,897,810	-		Echvi_3295	0.27	+0.6
3,897,810	-		Echvi_3295	0.27	-0.5
3,897,814	-		Echvi_3295	0.27	-0.2
3,897,814	-		Echvi_3295	0.27	+1.6
3,898,005	+		Echvi_3295	0.57	+0.6
3,898,006	-		Echvi_3295	0.57	+0.4
3,898,053	+		Echvi_3295	0.65	-0.0
3,898,053	+		Echvi_3295	0.65	+0.2
3,898,053	+		Echvi_3295	0.65	-0.7
3,898,053	+		Echvi_3295	0.65	-1.3
3,898,054	-		Echvi_3295	0.65	-2.7
3,898,063	+		Echvi_3295	0.66	+0.5
3,898,063	+		Echvi_3295	0.66	+1.7
3,898,066	-		Echvi_3295	0.67	-0.7
3,898,095	+		Echvi_3295	0.71	+0.5
3,898,132	-		Echvi_3295	0.77	-1.8
3,898,132	-		Echvi_3295	0.77	+0.5
3,898,155	+		Echvi_3295	0.81	+1.6
3,898,212	+		Echvi_3295	0.90	+1.6
3,898,213	-		Echvi_3295	0.90	-0.6
3,898,215	-				+0.4
3,898,260	-				-1.2
3,898,276	-				-1.1
3,898,295	+				-1.3
3,898,296	-				+0.0
3,898,296	-				+1.9
3,898,337	-				+0.3
3,898,346	+				+0.8
3,898,346	+				+0.7
3,898,369	+				+0.6
3,898,415	-				-0.5
3,898,426	-				-0.1
3,898,460	-				-2.0