Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1575

Experiment: m.b. Carbenicillin 0.01 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1574 and B158DRAFT_1575 are separated by 27 nucleotidesB158DRAFT_1575 and B158DRAFT_1576 are separated by 2 nucleotidesB158DRAFT_1576 and B158DRAFT_1577 are separated by 167 nucleotides B158DRAFT_1574: B158DRAFT_1574 - ribonuclease D, at 1,633,733 to 1,634,887 _1574 B158DRAFT_1575: B158DRAFT_1575 - Uncharacterized protein conserved in bacteria, at 1,634,915 to 1,635,181 _1575 B158DRAFT_1576: B158DRAFT_1576 - Uncharacterized conserved protein, at 1,635,184 to 1,635,633 _1576 B158DRAFT_1577: B158DRAFT_1577 - tRNA_Asp_GTC, at 1,635,801 to 1,635,877 _1577 Position (kb) 1634 1635 1636Strain fitness (log2 ratio) -2 -1 0 1 2at 1634.008 kb on - strand, within B158DRAFT_1574at 1634.074 kb on - strand, within B158DRAFT_1574at 1634.100 kb on + strand, within B158DRAFT_1574at 1634.100 kb on + strand, within B158DRAFT_1574at 1634.100 kb on + strand, within B158DRAFT_1574at 1634.108 kb on - strand, within B158DRAFT_1574at 1634.108 kb on - strand, within B158DRAFT_1574at 1634.156 kb on - strand, within B158DRAFT_1574at 1634.170 kb on + strand, within B158DRAFT_1574at 1634.170 kb on + strand, within B158DRAFT_1574at 1634.170 kb on + strand, within B158DRAFT_1574at 1634.178 kb on - strand, within B158DRAFT_1574at 1634.178 kb on - strand, within B158DRAFT_1574at 1634.178 kb on - strand, within B158DRAFT_1574at 1634.225 kb on + strand, within B158DRAFT_1574at 1634.234 kb on + strand, within B158DRAFT_1574at 1634.276 kb on - strand, within B158DRAFT_1574at 1634.391 kb on + strand, within B158DRAFT_1574at 1634.399 kb on - strand, within B158DRAFT_1574at 1634.562 kb on - strand, within B158DRAFT_1574at 1634.632 kb on - strand, within B158DRAFT_1574at 1634.789 kb on + strandat 1634.789 kb on + strandat 1634.797 kb on - strandat 1634.797 kb on - strandat 1634.842 kb on - strandat 1634.856 kb on + strandat 1635.003 kb on + strand, within B158DRAFT_1575at 1635.008 kb on + strand, within B158DRAFT_1575at 1635.011 kb on - strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.013 kb on + strand, within B158DRAFT_1575at 1635.024 kb on + strand, within B158DRAFT_1575at 1635.024 kb on + strand, within B158DRAFT_1575at 1635.032 kb on - strand, within B158DRAFT_1575at 1635.032 kb on - strand, within B158DRAFT_1575at 1635.066 kb on + strand, within B158DRAFT_1575at 1635.066 kb on + strand, within B158DRAFT_1575at 1635.066 kb on + strand, within B158DRAFT_1575at 1635.066 kb on + strand, within B158DRAFT_1575at 1635.074 kb on - strand, within B158DRAFT_1575at 1635.074 kb on - strand, within B158DRAFT_1575at 1635.074 kb on - strand, within B158DRAFT_1575at 1635.116 kb on + strand, within B158DRAFT_1575at 1635.220 kb on + strandat 1635.227 kb on + strandat 1635.267 kb on + strand, within B158DRAFT_1576at 1635.275 kb on + strand, within B158DRAFT_1576at 1635.342 kb on + strand, within B158DRAFT_1576at 1635.342 kb on - strand, within B158DRAFT_1576at 1635.344 kb on + strand, within B158DRAFT_1576at 1635.344 kb on + strand, within B158DRAFT_1576at 1635.352 kb on - strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.406 kb on - strand, within B158DRAFT_1576at 1635.406 kb on - strand, within B158DRAFT_1576at 1635.419 kb on + strand, within B158DRAFT_1576at 1635.427 kb on - strand, within B158DRAFT_1576at 1635.427 kb on - strand, within B158DRAFT_1576at 1635.435 kb on - strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.450 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.476 kb on + strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.484 kb on - strand, within B158DRAFT_1576at 1635.484 kb on - strand, within B158DRAFT_1576at 1635.547 kb on + strand, within B158DRAFT_1576at 1635.826 kb on - strand, within B158DRAFT_1577at 1635.826 kb on - strand, within B158DRAFT_1577at 1635.853 kb on + strand, within B158DRAFT_1577at 1635.864 kb on + strand, within B158DRAFT_1577at 1635.893 kb on + strandat 1635.984 kb on - strandat 1636.054 kb on + strandat 1636.062 kb on - strandat 1636.062 kb on - strandat 1636.107 kb on - strandat 1636.115 kb on - strandat 1636.136 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.01 mg/ml
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1,634,008 - B158DRAFT_1574 0.24 -0.1
1,634,074 - B158DRAFT_1574 0.30 -0.6
1,634,100 + B158DRAFT_1574 0.32 -0.4
1,634,100 + B158DRAFT_1574 0.32 +0.3
1,634,100 + B158DRAFT_1574 0.32 -0.2
1,634,108 - B158DRAFT_1574 0.32 -0.4
1,634,108 - B158DRAFT_1574 0.32 +0.2
1,634,156 - B158DRAFT_1574 0.37 -0.3
1,634,170 + B158DRAFT_1574 0.38 -0.2
1,634,170 + B158DRAFT_1574 0.38 -0.1
1,634,170 + B158DRAFT_1574 0.38 -0.6
1,634,178 - B158DRAFT_1574 0.39 -0.2
1,634,178 - B158DRAFT_1574 0.39 +0.7
1,634,178 - B158DRAFT_1574 0.39 -0.4
1,634,225 + B158DRAFT_1574 0.43 -0.1
1,634,234 + B158DRAFT_1574 0.43 -0.1
1,634,276 - B158DRAFT_1574 0.47 -0.1
1,634,391 + B158DRAFT_1574 0.57 -0.2
1,634,399 - B158DRAFT_1574 0.58 -0.5
1,634,562 - B158DRAFT_1574 0.72 +0.4
1,634,632 - B158DRAFT_1574 0.78 -0.1
1,634,789 + -0.7
1,634,789 + -0.1
1,634,797 - -0.9
1,634,797 - +0.3
1,634,842 - -0.3
1,634,856 + -0.5
1,635,003 + B158DRAFT_1575 0.33 -0.3
1,635,008 + B158DRAFT_1575 0.35 -0.7
1,635,011 - B158DRAFT_1575 0.36 -1.3
1,635,013 + B158DRAFT_1575 0.37 +0.0
1,635,013 + B158DRAFT_1575 0.37 -0.3
1,635,013 + B158DRAFT_1575 0.37 +0.0
1,635,013 + B158DRAFT_1575 0.37 -0.4
1,635,013 + B158DRAFT_1575 0.37 +0.5
1,635,013 + B158DRAFT_1575 0.37 -0.5
1,635,013 + B158DRAFT_1575 0.37 -0.0
1,635,013 + B158DRAFT_1575 0.37 -0.5
1,635,024 + B158DRAFT_1575 0.41 -0.7
1,635,024 + B158DRAFT_1575 0.41 -0.4
1,635,032 - B158DRAFT_1575 0.44 +0.0
1,635,032 - B158DRAFT_1575 0.44 +0.8
1,635,066 + B158DRAFT_1575 0.57 +0.3
1,635,066 + B158DRAFT_1575 0.57 +0.1
1,635,066 + B158DRAFT_1575 0.57 -0.1
1,635,066 + B158DRAFT_1575 0.57 -0.6
1,635,074 - B158DRAFT_1575 0.60 -0.6
1,635,074 - B158DRAFT_1575 0.60 -0.3
1,635,074 - B158DRAFT_1575 0.60 -0.4
1,635,116 + B158DRAFT_1575 0.75 -0.6
1,635,220 + -0.3
1,635,227 + -0.4
1,635,267 + B158DRAFT_1576 0.18 -0.5
1,635,275 + B158DRAFT_1576 0.20 -0.2
1,635,342 + B158DRAFT_1576 0.35 -0.3
1,635,342 - B158DRAFT_1576 0.35 -0.1
1,635,344 + B158DRAFT_1576 0.36 -0.1
1,635,344 + B158DRAFT_1576 0.36 -0.0
1,635,352 - B158DRAFT_1576 0.37 +0.4
1,635,398 + B158DRAFT_1576 0.48 +0.2
1,635,398 + B158DRAFT_1576 0.48 +1.5
1,635,398 + B158DRAFT_1576 0.48 -1.0
1,635,406 - B158DRAFT_1576 0.49 -0.4
1,635,406 - B158DRAFT_1576 0.49 -0.2
1,635,419 + B158DRAFT_1576 0.52 -0.4
1,635,427 - B158DRAFT_1576 0.54 -2.6
1,635,427 - B158DRAFT_1576 0.54 -0.2
1,635,435 - B158DRAFT_1576 0.56 -0.3
1,635,447 + B158DRAFT_1576 0.58 -1.2
1,635,447 + B158DRAFT_1576 0.58 +0.1
1,635,447 + B158DRAFT_1576 0.58 -0.3
1,635,450 - B158DRAFT_1576 0.59 +0.2
1,635,455 - B158DRAFT_1576 0.60 -0.8
1,635,455 - B158DRAFT_1576 0.60 -0.5
1,635,455 - B158DRAFT_1576 0.60 -0.4
1,635,474 + B158DRAFT_1576 0.64 -0.3
1,635,474 + B158DRAFT_1576 0.64 -0.2
1,635,474 + B158DRAFT_1576 0.64 -0.3
1,635,474 + B158DRAFT_1576 0.64 -0.3
1,635,474 + B158DRAFT_1576 0.64 +0.2
1,635,474 + B158DRAFT_1576 0.64 -0.3
1,635,474 + B158DRAFT_1576 0.64 -0.7
1,635,476 + B158DRAFT_1576 0.65 +0.1
1,635,482 - B158DRAFT_1576 0.66 -0.5
1,635,482 - B158DRAFT_1576 0.66 +0.3
1,635,482 - B158DRAFT_1576 0.66 -0.5
1,635,482 - B158DRAFT_1576 0.66 +0.1
1,635,482 - B158DRAFT_1576 0.66 +1.9
1,635,482 - B158DRAFT_1576 0.66 -0.7
1,635,482 - B158DRAFT_1576 0.66 +0.4
1,635,482 - B158DRAFT_1576 0.66 -0.8
1,635,484 - B158DRAFT_1576 0.67 -0.1
1,635,484 - B158DRAFT_1576 0.67 -0.5
1,635,547 + B158DRAFT_1576 0.81 -0.1
1,635,826 - B158DRAFT_1577 0.32 -0.7
1,635,826 - B158DRAFT_1577 0.32 -0.9
1,635,853 + B158DRAFT_1577 0.68 +0.2
1,635,864 + B158DRAFT_1577 0.82 -1.4
1,635,893 + -0.1
1,635,984 - -0.2
1,636,054 + -0.4
1,636,062 - -0.5
1,636,062 - -0.8
1,636,107 - -0.2
1,636,115 - -0.7
1,636,136 - -0.9

Or see this region's nucleotide sequence