Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4459

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
4,981,771	+				-0.2
4,981,771	+				+0.8
4,981,772	-				+0.6
4,981,772	-				-0.2
4,981,772	-				+1.6
4,981,785	+				+0.6
4,981,919	+		PfGW456L13_4458	0.12	-1.0
4,981,919	+		PfGW456L13_4458	0.12	-1.9
4,981,919	+		PfGW456L13_4458	0.12	-0.9
4,981,919	+		PfGW456L13_4458	0.12	+0.2
4,981,920	-		PfGW456L13_4458	0.12	+0.0
4,982,266	+		PfGW456L13_4458	0.50	-0.2
4,982,266	+		PfGW456L13_4458	0.50	-0.1
4,982,267	-		PfGW456L13_4458	0.50	+0.1
4,982,293	-		PfGW456L13_4458	0.53	+0.6
4,982,293	-		PfGW456L13_4458	0.53	+1.5
4,982,293	-		PfGW456L13_4458	0.53	-0.2
4,982,557	+		PfGW456L13_4458	0.81	+0.0
4,982,557	+		PfGW456L13_4458	0.81	+0.4
4,982,557	+		PfGW456L13_4458	0.81	+0.1
4,982,558	-		PfGW456L13_4458	0.81	-0.2
4,982,558	-		PfGW456L13_4458	0.81	-1.0
4,982,597	-		PfGW456L13_4458	0.86	+0.3
4,982,609	+		PfGW456L13_4458	0.87	-0.3
4,982,609	+		PfGW456L13_4458	0.87	+0.0
4,982,610	-		PfGW456L13_4458	0.87	+1.1
4,982,610	-		PfGW456L13_4458	0.87	+0.1
4,982,616	-		PfGW456L13_4458	0.88	+0.9
4,982,674	+				+1.0
4,982,674	+				-0.0
4,982,674	+				-0.4
4,982,675	-				+1.0
4,982,675	-				+0.5
4,982,675	-				+0.1
4,982,675	-				-0.0
4,982,738	+				-0.1
4,982,738	+				+0.1
4,982,738	+				+0.5
4,982,738	+				-0.9
4,982,738	+				-0.6
4,982,738	+				+0.1
4,982,738	+				-0.6
4,982,738	+				-1.1
4,982,738	+				+0.4
4,982,738	+				-0.2
4,982,738	+				-0.4
4,982,738	+				+1.4
4,982,738	+				+1.4
4,982,738	+				-0.5
4,982,738	+				+0.8
4,982,738	+				-0.5
4,982,738	+				+0.5
4,982,738	+				-1.7
4,982,739	-				+0.8
4,982,739	-				+0.1
4,982,739	-				-1.0
4,982,739	-				+0.7
4,982,739	-				+0.6
4,982,739	-				-1.2
4,982,739	-				+1.0
4,982,739	-				-0.6
4,982,739	-				+0.1
4,982,739	-				+0.2
4,982,739	-				-0.1
4,982,739	-				+0.1
4,982,739	-				+0.4
4,982,739	-				+0.5
4,982,739	-				+0.4
4,982,739	-				+0.1
4,982,739	-				-1.5
4,982,739	-				-0.0
4,982,739	-				+0.8
4,982,749	+				-0.0
4,982,779	+				-0.3
4,982,780	-				-0.5
4,982,938	+		PfGW456L13_4459	0.24	-0.3
4,982,939	-		PfGW456L13_4459	0.24	-1.0
4,983,007	+		PfGW456L13_4459	0.33	+0.5
4,983,007	+		PfGW456L13_4459	0.33	+0.3
4,983,007	+		PfGW456L13_4459	0.33	+0.5
4,983,007	+		PfGW456L13_4459	0.33	-0.8
4,983,007	+		PfGW456L13_4459	0.33	+0.2
4,983,007	+		PfGW456L13_4459	0.33	-0.4
4,983,007	+		PfGW456L13_4459	0.33	+1.0
4,983,007	+		PfGW456L13_4459	0.33	-0.0
4,983,007	+		PfGW456L13_4459	0.33	+1.4
4,983,007	+		PfGW456L13_4459	0.33	-0.7
4,983,007	+		PfGW456L13_4459	0.33	+1.4
4,983,007	+		PfGW456L13_4459	0.33	+0.6
4,983,007	+		PfGW456L13_4459	0.33	+0.6
4,983,007	+		PfGW456L13_4459	0.33	+0.8
4,983,008	-		PfGW456L13_4459	0.33	+1.8
4,983,008	-		PfGW456L13_4459	0.33	+0.2
4,983,008	-		PfGW456L13_4459	0.33	-1.1
4,983,008	-		PfGW456L13_4459	0.33	-0.5
4,983,008	-		PfGW456L13_4459	0.33	-0.2
4,983,008	-		PfGW456L13_4459	0.33	+1.3
4,983,008	-		PfGW456L13_4459	0.33	-1.0
4,983,008	-		PfGW456L13_4459	0.33	-0.2
4,983,008	-		PfGW456L13_4459	0.33	-0.0
4,983,008	-		PfGW456L13_4459	0.33	-1.9
4,983,130	+		PfGW456L13_4459	0.48	+0.4
4,983,130	+		PfGW456L13_4459	0.48	+0.3
4,983,131	-		PfGW456L13_4459	0.48	-0.1
4,983,202	-		PfGW456L13_4459	0.57	+1.0
4,983,284	-		PfGW456L13_4459	0.67	-0.9
4,983,379	+		PfGW456L13_4459	0.79	+0.3
4,983,379	+		PfGW456L13_4459	0.79	+0.7
4,983,379	+		PfGW456L13_4459	0.79	+1.5
4,983,379	+		PfGW456L13_4459	0.79	+1.1
4,983,380	-		PfGW456L13_4459	0.79	+0.2
4,983,380	-		PfGW456L13_4459	0.79	+1.3
4,983,380	-		PfGW456L13_4459	0.79	-0.6
4,983,407	-		PfGW456L13_4459	0.83	+0.5
4,983,410	+		PfGW456L13_4459	0.83	-0.0
4,983,411	-		PfGW456L13_4459	0.83	-1.1
4,983,718	+		PfGW456L13_4460	0.30	-0.6
4,983,718	+		PfGW456L13_4460	0.30	+0.4
4,983,718	+		PfGW456L13_4460	0.30	-0.6
4,983,718	+		PfGW456L13_4460	0.30	-1.0
4,983,718	+		PfGW456L13_4460	0.30	+0.4
4,983,718	+		PfGW456L13_4460	0.30	+1.0
4,983,719	-		PfGW456L13_4460	0.30	-0.3
4,983,719	-		PfGW456L13_4460	0.30	+0.6
4,983,719	-		PfGW456L13_4460	0.30	+0.3
4,983,719	-		PfGW456L13_4460	0.30	-1.2
4,983,719	-		PfGW456L13_4460	0.30	-1.1
4,983,737	-		PfGW456L13_4460	0.33	+0.0
4,983,861	+		PfGW456L13_4460	0.55	-0.6
4,983,861	+		PfGW456L13_4460	0.55	+0.7
4,983,862	-		PfGW456L13_4460	0.55	+0.5
4,984,013	+		PfGW456L13_4460	0.82	-0.1
4,984,013	+		PfGW456L13_4460	0.82	-0.0
4,984,013	+		PfGW456L13_4460	0.82	-0.6
4,984,013	+		PfGW456L13_4460	0.82	+0.6
4,984,014	-		PfGW456L13_4460	0.82	+0.7
4,984,014	-		PfGW456L13_4460	0.82	+0.2
4,984,014	-		PfGW456L13_4460	0.82	-0.1
4,984,014	-		PfGW456L13_4460	0.82	-0.6
4,984,014	-		PfGW456L13_4460	0.82	+0.7
4,984,014	-		PfGW456L13_4460	0.82	+0.3
4,984,014	-		PfGW456L13_4460	0.82	-0.2
4,984,014	-		PfGW456L13_4460	0.82	-0.5
4,984,014	-		PfGW456L13_4460	0.82	-0.6
4,984,014	-		PfGW456L13_4460	0.82	+0.1
4,984,014	-				+2.5
4,984,014	-		PfGW456L13_4460	0.82	-0.6
4,984,117	+				-0.6
4,984,118	-				+0.0
4,984,118	-				+2.2
4,984,175	+				+0.1
4,984,292	+				-0.2
4,984,292	+				-0.9
4,984,292	+				-0.9
4,984,293	-				+1.0
4,984,298	+				+0.1
4,984,298	+				+0.4
4,984,298	+				-1.1
4,984,298	+				+0.4
4,984,298	+				+1.0
4,984,299	-				-0.9
4,984,299	-				-0.0
4,984,299	-				+0.5
4,984,299	-				-0.2
4,984,299	-				-2.5
4,984,299	-				-1.6
4,984,299	-				+0.5
4,984,299	-				-0.0
4,984,299	-				+0.1
4,984,299	-				-0.5
4,984,301	+				+0.3
4,984,301	+				+0.1
4,984,301	+				+0.8
4,984,301	+				+0.3
4,984,301	+				+0.6
4,984,301	+				-0.2
4,984,301	+				-0.5
4,984,301	+				-0.2
4,984,301	+				+1.0
4,984,302	-				-0.2
4,984,302	-				+0.1
4,984,302	-				+0.7
4,984,302	-				+0.3
4,984,302	-				-0.0
4,984,302	-				+0.2
4,984,302	-				+0.2
4,984,386	-				-0.2
4,984,386	-				-1.1
4,984,386	-				+0.5
4,984,497	+		PfGW456L13_4461	0.16	+1.3