Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3919

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
4,390,144	+				+0.6
4,390,145	-				+2.2
4,390,145	-				+0.8
4,390,145	-				+0.2
4,390,534	+				-1.2
4,390,535	-				-0.8
4,390,548	+				-0.5
4,390,548	+				-1.0
4,390,561	+				+0.4
4,390,561	+				-0.9
4,390,561	+				-0.4
4,390,561	+				-0.9
4,390,562	-				-1.3
4,390,562	-				-1.8
4,390,620	+				+0.5
4,390,620	+				-1.3
4,390,621	-				-1.9
4,390,621	-				-0.5
4,390,621	-				-0.5
4,390,622	+				+0.5
4,390,622	+				-1.5
4,390,622	+				-0.2
4,390,622	+				+1.1
4,390,622	+				-0.2
4,390,622	+				+1.3
4,390,622	+				-1.1
4,390,622	+				+0.2
4,390,622	+				-0.2
4,390,622	+				+0.0
4,390,622	+				-2.7
4,390,622	+				-0.1
4,390,623	-				-0.5
4,390,623	-				-2.0
4,390,623	-				-0.5
4,390,623	-				+0.2
4,390,623	-				-1.5
4,390,623	-				+0.3
4,390,626	+				-1.8
4,390,626	+				-1.3
4,390,626	+				+0.8
4,390,626	+				+0.1
4,390,626	+				+0.3
4,390,626	+				-3.6
4,390,626	+				-0.8
4,390,626	+				+0.2
4,390,627	-				-2.2
4,390,627	-				-1.3
4,390,640	+				+0.2
4,390,640	+				-0.6
4,390,640	+				+0.4
4,390,641	-				-0.6
4,390,693	+				+0.3
4,390,693	+				+0.8
4,390,693	+				+0.8
4,390,693	+				+0.7
4,390,694	-				-0.5
4,390,694	-				-3.1
4,390,698	+				+1.1
4,390,698	+				+0.1
4,390,698	+				+0.8
4,390,698	+				+1.1
4,390,698	+				+1.5
4,390,698	+				-0.5
4,390,698	+				+0.2
4,390,698	+				+1.0
4,390,698	+				+0.5
4,390,699	-				+0.8
4,390,699	-				-0.8
4,390,699	-				-0.5
4,390,699	-				-1.5
4,390,699	-				-2.5
4,390,699	-				-1.5
4,390,699	-				-0.8
4,390,699	-				-1.2
4,390,699	-				-0.2
4,390,699	-				-2.0
4,390,699	-				-2.2
4,390,699	-				+0.8
4,390,699	-				-2.0
4,390,700	+				-1.3
4,390,700	+				-0.8
4,390,700	+				+1.8
4,390,700	+				+0.9
4,390,700	+				-0.4
4,390,700	+				-0.4
4,390,700	+				-0.3
4,390,700	+				+0.9
4,390,701	-				-2.5
4,390,701	-				-1.3
4,390,701	-				-2.5
4,390,701	-				-0.2
4,390,701	-				-3.5
4,390,701	-				-2.6
4,390,704	+				+1.4
4,390,704	+				+0.8
4,390,704	+				-0.8
4,390,704	+				-0.1
4,390,704	+				-0.8
4,390,704	+				+0.5
4,390,704	+				-0.7
4,390,704	+				+1.3
4,390,704	+				-0.2
4,390,704	+				-0.3
4,390,704	+				-1.5
4,390,705	-				-0.2
4,390,705	-				-3.6
4,390,705	-				-2.6
4,390,705	-				-2.0
4,390,705	-				-1.8
4,390,771	+				+0.2
4,390,771	+				-1.8
4,390,772	-				-1.2
4,390,799	-		PfGW456L13_3918	0.18	-3.0
4,390,799	-		PfGW456L13_3918	0.18	-2.3
4,390,837	+		PfGW456L13_3918	0.38	-0.2
4,391,065	+				-0.8
4,391,212	+		PfGW456L13_3919	0.16	+0.1
4,391,263	+		PfGW456L13_3919	0.27	-1.3
4,391,373	+		PfGW456L13_3919	0.51	-0.7
4,391,373	+		PfGW456L13_3919	0.51	-1.9
4,391,373	+		PfGW456L13_3919	0.51	-0.8
4,391,373	+		PfGW456L13_3919	0.51	-0.2
4,391,374	-		PfGW456L13_3919	0.51	-1.0
4,391,374	-		PfGW456L13_3919	0.51	-0.2
4,391,376	+		PfGW456L13_3919	0.52	-2.2
4,391,376	+		PfGW456L13_3919	0.52	-0.7
4,391,376	+		PfGW456L13_3919	0.52	-0.5
4,391,376	+		PfGW456L13_3919	0.52	-0.3
4,391,377	-		PfGW456L13_3919	0.52	+0.1
4,391,377	-		PfGW456L13_3919	0.52	-0.4
4,391,377	-		PfGW456L13_3919	0.52	-0.2
4,391,377	-		PfGW456L13_3919	0.52	+0.4
4,391,430	-		PfGW456L13_3919	0.63	-1.8
4,391,430	-		PfGW456L13_3919	0.63	-1.3
4,391,446	+		PfGW456L13_3919	0.67	-0.2
4,391,447	-		PfGW456L13_3919	0.67	-0.5
4,391,455	+		PfGW456L13_3919	0.69	+0.3
4,391,455	+		PfGW456L13_3919	0.69	-0.1
4,391,456	-		PfGW456L13_3919	0.69	-1.2
4,391,456	-		PfGW456L13_3919	0.69	-2.2
4,391,456	-		PfGW456L13_3919	0.69	+0.8
4,391,456	-		PfGW456L13_3919	0.69	-0.8
4,391,624	+				-0.2
4,391,624	+				+0.8
4,391,624	+				+0.2
4,391,625	-				+0.5
4,391,625	-				-2.8
4,391,625	-				-0.5
4,391,639	-				-0.4
4,391,639	-				+0.1
4,391,642	-				-1.3
4,391,642	-				+0.1
4,391,642	-				+0.6
4,391,642	-				+1.2
4,391,642	-				-0.3
4,391,695	+				+1.2
4,391,695	+				+0.5
4,391,695	+				-1.8
4,391,695	+				+0.4
4,391,695	+				-0.3
4,391,695	+				+0.6
4,391,696	-				-3.5
4,391,696	-				+0.0
4,391,696	-				-0.5
4,391,696	-				-2.5
4,391,706	+				-0.2
4,391,706	+				-0.5
4,391,707	-				-1.3
4,391,707	-				-0.3
4,391,707	-				-0.6
4,391,707	-				-0.9
4,391,707	-				-2.2
4,391,707	-				-1.5
4,391,707	-				-0.4
4,391,707	-				-0.8
4,391,709	+				+0.1
4,391,709	+				-1.8
4,391,710	-				-0.6
4,391,710	-				-2.3
4,391,710	-				-0.3
4,391,805	+				-1.1
4,391,805	+				-1.2
4,391,805	+				+2.0
4,391,805	+				-1.5
4,391,806	-				+0.5
4,391,806	-				-1.2
4,391,806	-				-0.8
4,391,806	-				-2.6
4,391,806	-				+0.8
4,391,806	-				-0.8
4,391,806	-				-0.7
4,391,806	-				-1.9
4,391,806	-				-0.7
4,391,806	-				-0.8
4,392,016	+				+1.8
4,392,016	+		PfGW456L13_3920	0.29	-0.4
4,392,016	+		PfGW456L13_3920	0.29	+0.2
4,392,017	-		PfGW456L13_3920	0.29	-0.8
4,392,017	-		PfGW456L13_3920	0.29	+0.2
4,392,017	-		PfGW456L13_3920	0.29	-0.7
4,392,020	+		PfGW456L13_3920	0.29	+0.5
4,392,020	+		PfGW456L13_3920	0.29	+0.6
4,392,020	+		PfGW456L13_3920	0.29	+0.2
4,392,020	+		PfGW456L13_3920	0.29	-0.5
4,392,021	-		PfGW456L13_3920	0.29	-1.5
4,392,021	-		PfGW456L13_3920	0.29	+0.2
4,392,021	-		PfGW456L13_3920	0.29	-0.2
4,392,134	-		PfGW456L13_3920	0.44	+0.8
4,392,192	+		PfGW456L13_3920	0.52	-1.5
4,392,192	+		PfGW456L13_3920	0.52	-0.4
4,392,220	+		PfGW456L13_3920	0.56	+1.0
4,392,221	-		PfGW456L13_3920	0.56	+2.8
4,392,333	+		PfGW456L13_3920	0.71	+0.4
4,392,514	+				-0.9
4,392,514	+				+1.5
4,392,514	+				-0.2
4,392,514	+				-1.9
4,392,514	+				+0.2
4,392,515	-				+1.8
4,392,515	-				-0.7
4,392,515	-				-0.0
4,392,515	-				-0.3