Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2557

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
2,827,377	+				-2.5
2,827,386	+				+1.1
2,827,386	+				-0.4
2,827,425	+				-1.3
2,827,485	-				+0.3
2,827,537	+				-2.5
2,827,537	+				-2.5
2,827,538	-				+1.2
2,827,538	-				+1.2
2,827,589	-				+1.0
2,827,597	+				-2.0
2,827,641	+				-0.8
2,827,642	-				+1.2
2,827,642	-				+1.0
2,827,678	+				+0.7
2,827,678	+				+1.5
2,827,678	+				+0.8
2,827,679	-				+1.6
2,827,679	-				+2.1
2,827,723	+				+0.9
2,827,724	-				+2.1
2,827,724	-				+1.5
2,827,724	-				+2.0
2,827,760	+		PfGW456L13_2557	0.10	+0.5
2,827,760	+		PfGW456L13_2557	0.10	+1.5
2,827,760	+		PfGW456L13_2557	0.10	+1.4
2,827,760	+		PfGW456L13_2557	0.10	+1.8
2,827,760	+		PfGW456L13_2557	0.10	+1.6
2,827,760	+		PfGW456L13_2557	0.10	+1.8
2,827,760	+		PfGW456L13_2557	0.10	+0.4
2,827,760	+		PfGW456L13_2557	0.10	+0.3
2,827,760	+		PfGW456L13_2557	0.10	-1.1
2,827,761	-		PfGW456L13_2557	0.10	+1.6
2,827,761	-		PfGW456L13_2557	0.10	+0.2
2,827,761	-		PfGW456L13_2557	0.10	+1.5
2,827,761	-		PfGW456L13_2557	0.10	+1.5
2,827,761	-		PfGW456L13_2557	0.10	+1.6
2,827,761	-		PfGW456L13_2557	0.10	+0.9
2,827,761	-		PfGW456L13_2557	0.10	+1.6
2,827,789	+		PfGW456L13_2557	0.13	+2.4
2,827,806	-		PfGW456L13_2557	0.15	+1.2
2,827,806	-		PfGW456L13_2557	0.15	+2.3
2,827,865	+		PfGW456L13_2557	0.22	+0.8
2,827,865	+		PfGW456L13_2557	0.22	+2.1
2,827,865	+		PfGW456L13_2557	0.22	+2.4
2,827,865	+		PfGW456L13_2557	0.22	+1.9
2,827,865	+		PfGW456L13_2557	0.22	+1.2
2,827,865	+		PfGW456L13_2557	0.22	+0.8
2,827,865	+		PfGW456L13_2557	0.22	+0.9
2,827,865	+		PfGW456L13_2557	0.22	+0.4
2,827,866	-		PfGW456L13_2557	0.22	+0.8
2,827,866	-		PfGW456L13_2557	0.22	+1.4
2,827,866	-		PfGW456L13_2557	0.22	+1.7
2,827,866	-		PfGW456L13_2557	0.22	+1.1
2,827,866	-		PfGW456L13_2557	0.22	+1.5
2,827,866	-		PfGW456L13_2557	0.22	+1.4
2,827,866	-		PfGW456L13_2557	0.22	+1.4
2,827,866	-		PfGW456L13_2557	0.22	+0.6
2,827,866	-		PfGW456L13_2557	0.22	+1.5
2,827,964	-		PfGW456L13_2557	0.34	+1.2
2,828,156	+		PfGW456L13_2557	0.56	+0.0
2,828,156	+		PfGW456L13_2557	0.56	-0.1
2,828,157	-		PfGW456L13_2557	0.56	+1.8
2,828,311	-		PfGW456L13_2557	0.74	+2.2
2,828,311	-		PfGW456L13_2557	0.74	+0.6
2,828,433	+		PfGW456L13_2557	0.88	+0.3
2,828,433	+		PfGW456L13_2557	0.88	+1.0
2,828,541	+				+1.2
2,828,541	+				-0.1
2,828,541	+				-0.8
2,828,541	+				+1.0
2,828,667	+				+0.1
2,828,675	-				+2.2
2,828,730	+				+0.3
2,828,730	+				+1.2
2,828,730	+				-0.3
2,828,730	+				+1.1
2,828,730	+				+0.2
2,828,731	-				+0.2
2,828,731	-				-0.1
2,828,753	-				+1.7
2,828,753	-				+0.4
2,828,766	+				+0.4
2,828,766	+				-0.7
2,828,766	+				-0.5
2,828,767	-				+1.2
2,828,769	+				+0.9
2,828,874	+				+1.9
2,828,875	-				+0.2
2,828,875	-				-0.4
2,828,875	-				+0.7
2,828,941	+				+0.3
2,828,941	+				-0.1
2,828,942	-				+0.7
2,828,942	-				+0.2
2,828,984	-		PfGW456L13_2558	0.10	+2.0
2,829,018	+		PfGW456L13_2558	0.13	+0.5
2,829,018	+		PfGW456L13_2558	0.13	-0.1
2,829,018	+		PfGW456L13_2558	0.13	-0.5
2,829,018	+		PfGW456L13_2558	0.13	+0.1
2,829,019	-		PfGW456L13_2558	0.14	-0.1
2,829,019	-		PfGW456L13_2558	0.14	-1.1
2,829,022	+		PfGW456L13_2558	0.14	-0.2
2,829,023	-		PfGW456L13_2558	0.14	+1.7
2,829,023	-		PfGW456L13_2558	0.14	+1.4
2,829,370	+		PfGW456L13_2558	0.48	+0.2
2,829,370	+		PfGW456L13_2558	0.48	-0.2
2,829,371	-		PfGW456L13_2558	0.48	-1.3
2,829,371	-		PfGW456L13_2558	0.48	+0.6
2,829,496	+		PfGW456L13_2558	0.60	+0.4
2,829,496	+		PfGW456L13_2558	0.60	+1.7
2,829,496	+		PfGW456L13_2558	0.60	+0.7
2,829,496	+		PfGW456L13_2558	0.60	+0.4
2,829,497	-		PfGW456L13_2558	0.60	+0.5
2,829,497	-		PfGW456L13_2558	0.60	-0.5
2,829,497	-		PfGW456L13_2558	0.60	+0.1
2,829,505	+		PfGW456L13_2558	0.61	+1.0
2,829,506	-		PfGW456L13_2558	0.61	-1.0
2,829,506	-		PfGW456L13_2558	0.61	-1.0
2,829,506	-		PfGW456L13_2558	0.61	+0.2
2,829,520	+		PfGW456L13_2558	0.62	-0.2
2,829,520	+		PfGW456L13_2558	0.62	-0.4
2,829,521	-		PfGW456L13_2558	0.62	+1.1