Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2554

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
2,821,559	+		PfGW456L13_2553	0.43	+0.7
2,821,559	+		PfGW456L13_2553	0.43	-0.5
2,821,560	-		PfGW456L13_2553	0.43	-2.0
2,821,739	-		PfGW456L13_2553	0.57	-1.7
2,822,021	+		PfGW456L13_2553	0.79	-0.6
2,822,021	+		PfGW456L13_2553	0.79	-0.4
2,822,107	+		PfGW456L13_2553	0.85	-0.8
2,822,148	+		PfGW456L13_2553	0.89	-1.0
2,822,148	+		PfGW456L13_2553	0.89	+0.6
2,822,148	+		PfGW456L13_2553	0.89	-0.4
2,822,161	+		PfGW456L13_2553	0.90	-1.1
2,822,161	+		PfGW456L13_2553	0.90	+0.0
2,822,161	+		PfGW456L13_2553	0.90	+0.4
2,822,161	+		PfGW456L13_2553	0.90	-0.5
2,822,161	+		PfGW456L13_2553	0.90	-0.1
2,822,161	+		PfGW456L13_2553	0.90	-1.3
2,822,161	+		PfGW456L13_2553	0.90	-0.3
2,822,161	+		PfGW456L13_2553	0.90	-1.3
2,822,165	+				-2.0
2,822,165	+				-0.7
2,822,165	+				+0.3
2,822,165	+				+1.3
2,822,165	+				+1.9
2,822,166	-				-0.1
2,822,166	-				+0.3
2,822,166	-				+1.3
2,822,166	-				+0.0
2,822,166	-				+0.6
2,822,166	-				-1.7
2,822,199	+				-1.9
2,822,200	-				+0.0
2,822,200	-				-0.4
2,822,220	+				+0.2
2,822,221	-				-0.7
2,822,221	-				-1.7
2,822,243	+				+0.2
2,822,243	+				-0.4
2,822,243	+				-0.8
2,822,243	+				-2.0
2,822,243	+				-0.0
2,822,243	+				-0.2
2,822,243	+				-2.0
2,822,243	+				-0.5
2,822,243	+				+1.0
2,822,243	+				-0.8
2,822,243	+				-0.3
2,822,243	+				-2.5
2,822,243	+				-0.8
2,822,243	+				-1.5
2,822,243	+				+0.0
2,822,243	+				-0.3
2,822,243	+				-0.2
2,822,243	+				-0.5
2,822,243	+				-1.7
2,822,243	+				-0.5
2,822,244	-				-0.4
2,822,244	-				+0.9
2,822,244	-				-1.1
2,822,244	-				-1.7
2,822,244	-				-1.7
2,822,244	-				-2.3
2,822,244	-				-0.7
2,822,244	-				-0.7
2,822,244	-				-2.0
2,822,244	-				-0.3
2,822,244	-				+1.1
2,822,245	+				+0.6
2,822,245	+				+0.7
2,822,245	+				-0.5
2,822,245	+				+0.1
2,822,245	+				+0.4
2,822,245	+				+0.1
2,822,245	+				+1.1
2,822,245	+				-0.3
2,822,246	-				-2.1
2,822,249	+				-0.9
2,822,249	+				+1.3
2,822,249	+				+0.0
2,822,249	+				-0.6
2,822,250	-				-0.5
2,822,250	-				+0.6
2,822,291	+				+0.2
2,822,291	+				-0.0
2,822,291	+				+0.0
2,822,340	-				+0.3
2,822,423	+				+0.2
2,822,424	-				-1.6
2,822,452	-				+0.5
2,822,498	+				+1.0
2,822,498	+				-0.8
2,822,498	+				+0.9
2,822,498	+				-0.1
2,822,498	+				+1.0
2,822,498	+				+0.5
2,822,498	+				-1.1
2,822,499	-				-2.1
2,822,499	-				-1.1
2,822,499	-				-2.5
2,822,520	+				+1.0
2,822,532	-				-0.7
2,822,952	+		PfGW456L13_2554	0.17	-1.5
2,822,952	+		PfGW456L13_2554	0.17	+0.0
2,822,952	+		PfGW456L13_2554	0.17	-0.7
2,822,952	+		PfGW456L13_2554	0.17	-1.2
2,822,953	-		PfGW456L13_2554	0.17	+0.4
2,823,214	-		PfGW456L13_2554	0.28	-2.8
2,823,216	+		PfGW456L13_2554	0.28	-0.7
2,823,505	-		PfGW456L13_2554	0.40	-1.6
2,823,505	-		PfGW456L13_2554	0.40	-0.2
2,823,541	-		PfGW456L13_2554	0.42	-1.6
2,823,614	+		PfGW456L13_2554	0.45	+1.1
2,823,615	-		PfGW456L13_2554	0.45	-1.7
2,823,723	+		PfGW456L13_2554	0.49	-2.0
2,823,723	+		PfGW456L13_2554	0.49	-2.1
2,823,723	+		PfGW456L13_2554	0.49	-1.1
2,823,723	+		PfGW456L13_2554	0.49	-1.0
2,823,723	+		PfGW456L13_2554	0.49	-1.8
2,823,723	+		PfGW456L13_2554	0.49	-2.0
2,823,723	+		PfGW456L13_2554	0.49	-1.1
2,823,723	+		PfGW456L13_2554	0.49	-0.5
2,823,723	+		PfGW456L13_2554	0.49	-0.5
2,823,723	+				-0.1
2,823,723	+		PfGW456L13_2554	0.49	-2.0
2,823,724	-		PfGW456L13_2554	0.49	-0.1
2,823,724	-		PfGW456L13_2554	0.49	-1.1
2,823,724	-		PfGW456L13_2554	0.49	-1.3
2,823,724	-		PfGW456L13_2554	0.49	-2.0
2,823,724	-		PfGW456L13_2554	0.49	+0.3
2,823,897	+		PfGW456L13_2554	0.56	-1.0
2,823,897	+		PfGW456L13_2554	0.56	-2.0
2,824,044	+		PfGW456L13_2554	0.63	-1.3
2,824,131	+		PfGW456L13_2554	0.66	-3.5
2,824,131	+		PfGW456L13_2554	0.66	-0.8
2,824,134	+		PfGW456L13_2554	0.66	-0.5
2,824,134	+		PfGW456L13_2554	0.66	+0.5
2,824,134	+		PfGW456L13_2554	0.66	+0.1
2,824,274	+		PfGW456L13_2554	0.72	+0.0
2,824,529	+		PfGW456L13_2554	0.83	-2.6
2,824,529	+		PfGW456L13_2554	0.83	-2.6
2,824,529	+		PfGW456L13_2554	0.83	-0.1
2,824,529	+		PfGW456L13_2554	0.83	-2.7
2,824,778	+				-3.0
2,824,778	+				-2.3
2,824,792	+				-1.3
2,824,792	+				-2.3
2,824,845	+				-1.5
2,824,928	+				-1.2
2,824,938	+				-3.0
2,824,941	+				+0.1
2,824,945	+				+2.0
2,824,945	+				-0.3
2,824,945	+				+0.3
2,824,977	+				-0.3
2,824,977	+				-0.3
2,824,989	+				-0.1
2,824,991	+				-0.2
2,825,003	+				+0.1
2,825,003	+				+1.0
2,825,074	+				+0.0
2,825,074	+				+0.9
2,825,074	+				+0.9
2,825,074	+				-1.5
2,825,076	+				-0.4
2,825,076	+				+1.9
2,825,076	+				+0.2
2,825,086	+				+0.9
2,825,360	+				-1.7
2,825,543	+				+0.1
2,825,543	+				-1.0
2,825,645	+				-1.1
2,825,645	+				-3.5