Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2547

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
2,813,622	-		PfGW456L13_2545	0.57	-0.7
2,813,622	-		PfGW456L13_2545	0.57	-0.9
2,813,839	+		PfGW456L13_2545	0.86	+0.5
2,813,839	+		PfGW456L13_2545	0.86	-0.6
2,813,839	+		PfGW456L13_2545	0.86	-0.5
2,813,850	+		PfGW456L13_2545	0.87	-0.1
2,813,850	+		PfGW456L13_2545	0.87	-0.7
2,813,850	+		PfGW456L13_2545	0.87	+0.1
2,813,851	-		PfGW456L13_2545	0.87	+0.3
2,813,851	-		PfGW456L13_2545	0.87	-0.1
2,813,851	-		PfGW456L13_2545	0.87	+0.3
2,813,851	-		PfGW456L13_2545	0.87	-0.5
2,813,856	+		PfGW456L13_2545	0.88	-1.1
2,813,857	-		PfGW456L13_2545	0.88	-1.0
2,813,953	+				+0.6
2,814,108	-		PfGW456L13_2546	0.50	+1.7
2,814,168	+		PfGW456L13_2546	0.86	+0.6
2,814,168	+		PfGW456L13_2546	0.86	+2.4
2,814,168	+		PfGW456L13_2546	0.86	+0.6
2,814,168	+		PfGW456L13_2546	0.86	+0.4
2,814,168	+		PfGW456L13_2546	0.86	+0.9
2,814,168	+		PfGW456L13_2546	0.86	-0.0
2,814,168	+		PfGW456L13_2546	0.86	-1.2
2,814,168	+		PfGW456L13_2546	0.86	+0.9
2,814,168	+		PfGW456L13_2546	0.86	+1.0
2,814,168	+		PfGW456L13_2546	0.86	+0.3
2,814,168	+		PfGW456L13_2546	0.86	+0.1
2,814,169	-		PfGW456L13_2546	0.86	-0.3
2,814,169	-		PfGW456L13_2546	0.86	-1.1
2,814,169	-		PfGW456L13_2546	0.86	-2.0
2,814,169	-		PfGW456L13_2546	0.86	-0.7
2,814,169	-		PfGW456L13_2546	0.86	-2.1
2,814,169	-		PfGW456L13_2546	0.86	-0.6
2,814,169	-		PfGW456L13_2546	0.86	-0.5
2,814,169	-		PfGW456L13_2546	0.86	-0.7
2,814,169	-		PfGW456L13_2546	0.86	+0.9
2,814,269	+				-0.1
2,814,269	+				+1.3
2,814,269	+				-1.1
2,814,269	+				+0.9
2,814,269	+				+0.5
2,814,279	+				-0.3
2,814,347	+				-0.1
2,814,347	+				+0.0
2,814,349	+				-1.1
2,814,370	+				+0.0
2,814,371	-				-1.6
2,814,371	-				-3.9
2,814,394	+				-1.9
2,814,395	-				-2.8
2,814,395	-				-2.7
2,814,563	+		PfGW456L13_2547	0.26	-1.6
2,814,563	+		PfGW456L13_2547	0.26	-2.0
2,814,564	-		PfGW456L13_2547	0.26	-0.5
2,814,564	-		PfGW456L13_2547	0.26	-0.6
2,814,634	+		PfGW456L13_2547	0.36	-1.3
2,814,635	-		PfGW456L13_2547	0.36	-1.1
2,814,635	-		PfGW456L13_2547	0.36	-0.4
2,814,734	+		PfGW456L13_2547	0.50	-0.1
2,815,097	+				+0.7
2,815,097	+				-1.6
2,815,098	-				+1.1
2,815,098	-				-1.1
2,815,144	+				-0.6
2,815,144	+				-0.3
2,815,179	+				-0.3
2,815,180	-				+0.6
2,815,180	-				-0.1
2,815,207	+				+0.6
2,815,207	+				-0.3
2,815,208	-				-0.1
2,815,208	-				+1.3
2,815,371	-		PfGW456L13_2548	0.86	-0.9
2,815,397	+				-0.0
2,815,397	+				+0.0
2,815,397	+				-0.1
2,815,398	-				-0.4
2,815,398	-				-1.7
2,815,398	-				-0.0
2,815,398	-				-1.0
2,815,416	+				+0.9
2,815,416	+				-0.4
2,815,416	+				+0.6
2,815,416	+				-0.2
2,815,416	+				-1.7
2,815,416	+				+1.4
2,815,416	+				-0.7
2,815,416	+				+0.3
2,815,416	+				+0.2
2,815,416	+				-1.7
2,815,416	+				-0.3
2,815,416	+				-0.5
2,815,416	+				+1.1
2,815,416	+				-0.7
2,815,416	+				-0.3
2,815,416	+				-0.7
2,815,416	+				-0.6
2,815,416	+				+0.1
2,815,416	+				-0.3
2,815,416	+				+0.1
2,815,416	+				-0.1
2,815,416	+				+1.1
2,815,417	-				+1.6
2,815,417	-				+0.3
2,815,417	-				+0.1
2,815,417	-				-0.1
2,815,417	-				-1.4
2,815,417	-				+0.5
2,815,417	-				-0.2
2,815,417	-				+1.3
2,815,417	-				+0.3
2,815,417	-				+0.0
2,815,417	-				+0.4
2,815,417	-				-0.4
2,815,417	-				+0.5
2,815,417	-				-0.4
2,815,417	-				-0.1
2,815,417	-				-0.2
2,815,417	-				-0.0
2,815,417	-				-0.7
2,815,417	-				-0.3
2,815,417	-				-0.7
2,815,417	-				-1.4
2,815,417	-				+0.4
2,815,417	-				-0.3
2,815,417	-				+0.1
2,815,582	-				-1.0
2,815,692	+				-2.1
2,815,692	+				-1.7
2,815,692	+				-0.1
2,815,692	+				-0.2
2,815,692	+				+0.3
2,815,692	+				+0.3
2,815,693	-				-0.5
2,815,706	+				-0.3
2,815,707	-				-0.5
2,815,707	-				-0.9
2,815,707	-				-0.9
2,815,707	-				+1.7
2,815,749	+				+0.7
2,815,749	+				+0.2
2,815,750	-				-0.3
2,815,750	-				+0.0
2,815,750	-				+0.7
2,815,750	-				-0.6
2,815,750	-				-0.7
2,815,801	+		PfGW456L13_2549	0.12	-0.1
2,815,801	+		PfGW456L13_2549	0.12	+0.2
2,815,801	+		PfGW456L13_2549	0.12	-1.5
2,815,801	+		PfGW456L13_2549	0.12	-0.2
2,815,801	+		PfGW456L13_2549	0.12	-0.7
2,815,801	+		PfGW456L13_2549	0.12	-0.4
2,815,802	-		PfGW456L13_2549	0.12	-0.1
2,815,802	-		PfGW456L13_2549	0.12	-0.6
2,815,802	-		PfGW456L13_2549	0.12	-2.5
2,815,802	-		PfGW456L13_2549	0.12	-0.8
2,815,802	-		PfGW456L13_2549	0.12	-0.6
2,815,802	-		PfGW456L13_2549	0.12	+1.9
2,815,802	-				-0.7
2,815,802	-		PfGW456L13_2549	0.12	+1.4
2,815,802	-		PfGW456L13_2549	0.12	+0.9
2,815,802	-		PfGW456L13_2549	0.12	-0.7
2,815,833	+		PfGW456L13_2549	0.15	+0.3
2,815,833	+		PfGW456L13_2549	0.15	-0.4
2,815,834	-		PfGW456L13_2549	0.15	-2.1
2,815,834	-		PfGW456L13_2549	0.15	-1.6
2,815,834	-		PfGW456L13_2549	0.15	+0.4
2,815,834	-		PfGW456L13_2549	0.15	+2.2
2,815,834	-		PfGW456L13_2549	0.15	+0.4
2,815,834	-				+0.3
2,815,842	+		PfGW456L13_2549	0.16	-1.1
2,815,842	+		PfGW456L13_2549	0.16	-1.4
2,815,843	-		PfGW456L13_2549	0.16	-0.4
2,815,998	+		PfGW456L13_2549	0.33	-0.6
2,815,998	+		PfGW456L13_2549	0.33	-1.0
2,815,998	+		PfGW456L13_2549	0.33	-0.5
2,815,999	-		PfGW456L13_2549	0.33	-2.0
2,815,999	-		PfGW456L13_2549	0.33	-0.1
2,815,999	-		PfGW456L13_2549	0.33	-1.0
2,816,038	+		PfGW456L13_2549	0.37	-1.0
2,816,038	+		PfGW456L13_2549	0.37	-0.9
2,816,038	+		PfGW456L13_2549	0.37	+0.0
2,816,038	+		PfGW456L13_2549	0.37	-0.6
2,816,039	-		PfGW456L13_2549	0.37	-1.5
2,816,039	-		PfGW456L13_2549	0.37	+0.6
2,816,039	-		PfGW456L13_2549	0.37	+0.1
2,816,061	+		PfGW456L13_2549	0.39	-0.6
2,816,061	+		PfGW456L13_2549	0.39	+0.4
2,816,062	-		PfGW456L13_2549	0.40	-0.3
2,816,090	+		PfGW456L13_2549	0.42	+0.2
2,816,090	+		PfGW456L13_2549	0.42	+0.4
2,816,091	-		PfGW456L13_2549	0.43	+0.9