Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1822

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
2,007,288	+				+0.2
2,007,289	-				+0.7
2,007,289	-				-0.8
2,007,289	-				-1.1
2,007,327	+				-0.2
2,007,328	-				+2.0
2,007,367	-		PfGW456L13_1821	0.12	-1.0
2,007,376	+		PfGW456L13_1821	0.13	+0.5
2,007,591	+		PfGW456L13_1821	0.35	+0.4
2,007,591	+		PfGW456L13_1821	0.35	-0.8
2,007,591	+		PfGW456L13_1821	0.35	-0.6
2,007,717	+		PfGW456L13_1821	0.48	-3.0
2,007,717	+		PfGW456L13_1821	0.48	+0.6
2,007,717	+		PfGW456L13_1821	0.48	+0.1
2,007,717	+		PfGW456L13_1821	0.48	-0.3
2,007,717	+		PfGW456L13_1821	0.48	-0.4
2,007,717	+		PfGW456L13_1821	0.48	+1.2
2,007,717	+		PfGW456L13_1821	0.48	+1.4
2,007,717	+		PfGW456L13_1821	0.48	-0.3
2,007,717	+		PfGW456L13_1821	0.48	+0.1
2,007,717	+		PfGW456L13_1821	0.48	+0.2
2,007,717	+		PfGW456L13_1821	0.48	+1.2
2,007,718	-		PfGW456L13_1821	0.48	-1.3
2,007,718	-		PfGW456L13_1821	0.48	-2.0
2,007,718	-		PfGW456L13_1821	0.48	+1.4
2,007,718	-		PfGW456L13_1821	0.48	+0.0
2,007,718	-		PfGW456L13_1821	0.48	-1.0
2,007,718	-		PfGW456L13_1821	0.48	+0.0
2,007,721	-		PfGW456L13_1821	0.48	-0.3
2,007,792	+		PfGW456L13_1821	0.56	+0.8
2,007,792	+		PfGW456L13_1821	0.56	+0.4
2,007,792	+		PfGW456L13_1821	0.56	+0.2
2,007,792	+		PfGW456L13_1821	0.56	+0.2
2,007,792	+		PfGW456L13_1821	0.56	-0.6
2,007,792	+		PfGW456L13_1821	0.56	+1.2
2,007,792	+		PfGW456L13_1821	0.56	+0.5
2,007,792	+		PfGW456L13_1821	0.56	+0.4
2,007,792	+		PfGW456L13_1821	0.56	+0.4
2,007,792	+		PfGW456L13_1821	0.56	-0.6
2,007,792	+		PfGW456L13_1821	0.56	-0.3
2,007,793	-		PfGW456L13_1821	0.56	-1.5
2,007,793	-		PfGW456L13_1821	0.56	-1.1
2,007,793	-		PfGW456L13_1821	0.56	+0.0
2,007,793	-		PfGW456L13_1821	0.56	-0.1
2,007,793	-		PfGW456L13_1821	0.56	+0.2
2,007,793	-		PfGW456L13_1821	0.56	+0.0
2,007,793	-		PfGW456L13_1821	0.56	-0.4
2,007,793	-		PfGW456L13_1821	0.56	-0.4
2,007,793	-		PfGW456L13_1821	0.56	-0.8
2,007,793	-		PfGW456L13_1821	0.56	+1.0
2,007,837	+		PfGW456L13_1821	0.60	+1.0
2,007,837	+		PfGW456L13_1821	0.60	-1.3
2,007,837	+		PfGW456L13_1821	0.60	+0.1
2,007,858	+		PfGW456L13_1821	0.62	-1.3
2,007,858	+		PfGW456L13_1821	0.62	+0.8
2,007,858	+		PfGW456L13_1821	0.62	-0.6
2,007,859	-		PfGW456L13_1821	0.62	-0.5
2,007,859	-		PfGW456L13_1821	0.62	-0.3
2,007,859	-		PfGW456L13_1821	0.62	+0.1
2,007,859	-		PfGW456L13_1821	0.62	+0.8
2,007,859	-		PfGW456L13_1821	0.62	-0.0
2,008,461	-		PfGW456L13_1822	0.33	+0.5
2,008,542	-		PfGW456L13_1822	0.44	+1.0
2,008,694	+		PfGW456L13_1822	0.65	+0.1
2,008,694	+		PfGW456L13_1822	0.65	-0.0
2,008,694	+		PfGW456L13_1822	0.65	+1.2
2,008,694	+		PfGW456L13_1822	0.65	-1.6
2,008,694	+		PfGW456L13_1822	0.65	-0.6
2,008,695	-		PfGW456L13_1822	0.65	+0.5
2,008,695	-		PfGW456L13_1822	0.65	+0.3
2,008,695	-		PfGW456L13_1822	0.65	-0.8
2,008,695	-		PfGW456L13_1822	0.65	-0.5
2,008,795	+		PfGW456L13_1822	0.79	-0.7
2,008,970	+				-0.3
2,008,971	-				+0.4
2,008,984	+				-0.3
2,008,984	+				-0.2
2,008,985	-				-1.0
2,008,998	+				-0.6
2,008,998	+				-0.6
2,008,999	-				-0.8
2,008,999	-				-0.2
2,008,999	-				+1.8
2,009,006	+				-0.2
2,009,006	+				-0.1
2,009,038	+				-0.5
2,009,038	+				-0.4
2,009,038	+				+0.1
2,009,038	+				+0.0
2,009,038	+				-0.6
2,009,038	+				-0.2
2,009,038	+				+1.4
2,009,038	+				-0.4
2,009,038	+				-0.6
2,009,038	+				-1.4
2,009,038	+				+1.9
2,009,038	+				+0.5
2,009,038	+				-0.4
2,009,038	+				-1.5
2,009,038	+				-0.9
2,009,038	+				-0.1
2,009,038	+				+1.4
2,009,038	+				-1.3
2,009,038	+				-2.4
2,009,038	+				+0.5
2,009,038	+				-0.0
2,009,042	+				-0.1
2,009,042	+				-0.1
2,009,042	+				-0.4
2,009,042	+				+1.4
2,009,042	+				+0.9
2,009,042	+				-0.6
2,009,042	+				+0.4
2,009,042	+				-0.4
2,009,042	+				+0.3
2,009,042	+				+0.2
2,009,042	+				-0.2
2,009,042	+				-0.7
2,009,042	+				+1.6
2,009,042	+				+0.1
2,009,042	+				-0.8
2,009,042	+				-0.0
2,009,043	-				+0.1
2,009,043	-				+0.4
2,009,087	+				+0.8
2,009,088	-				+0.1
2,009,114	+				-0.6
2,009,166	+				-0.6
2,009,166	+				-0.8
2,009,172	+				-0.9
2,009,430	+		PfGW456L13_1823	0.20	+0.2
2,009,430	+		PfGW456L13_1823	0.20	+0.3
2,009,430	+		PfGW456L13_1823	0.20	+0.0
2,009,430	+		PfGW456L13_1823	0.20	-1.8
2,009,430	+		PfGW456L13_1823	0.20	-0.8
2,009,430	+		PfGW456L13_1823	0.20	-0.7
2,009,430	+		PfGW456L13_1823	0.20	+0.6
2,009,431	-		PfGW456L13_1823	0.20	-1.0
2,009,431	-		PfGW456L13_1823	0.20	-1.0
2,009,432	+		PfGW456L13_1823	0.20	-0.9
2,009,433	-		PfGW456L13_1823	0.20	-1.3
2,009,433	-		PfGW456L13_1823	0.20	-1.3
2,009,433	-		PfGW456L13_1823	0.20	+0.0
2,009,466	+		PfGW456L13_1823	0.22	-1.4
2,009,467	-		PfGW456L13_1823	0.22	-1.5
2,009,536	+		PfGW456L13_1823	0.27	+0.2
2,009,536	+		PfGW456L13_1823	0.27	-1.7
2,009,536	+		PfGW456L13_1823	0.27	-0.2
2,009,537	-		PfGW456L13_1823	0.27	-0.6
2,009,537	-		PfGW456L13_1823	0.27	-0.1
2,009,537	-		PfGW456L13_1823	0.27	-1.1
2,009,559	+		PfGW456L13_1823	0.29	+0.3
2,009,559	+		PfGW456L13_1823	0.29	+0.4
2,009,740	-		PfGW456L13_1823	0.41	-0.2
2,009,788	+		PfGW456L13_1823	0.45	-0.6
2,009,789	-		PfGW456L13_1823	0.45	-1.1
2,009,844	+		PfGW456L13_1823	0.49	+0.7
2,009,844	+		PfGW456L13_1823	0.49	-1.4
2,009,844	+		PfGW456L13_1823	0.49	+0.3
2,009,844	+		PfGW456L13_1823	0.49	-0.7
2,009,844	+		PfGW456L13_1823	0.49	+0.2
2,009,844	+		PfGW456L13_1823	0.49	+0.1
2,009,844	+		PfGW456L13_1823	0.49	-0.8
2,009,844	+		PfGW456L13_1823	0.49	-0.2
2,009,844	+		PfGW456L13_1823	0.49	-0.4
2,009,844	+		PfGW456L13_1823	0.49	+1.3
2,009,844	+		PfGW456L13_1823	0.49	-1.6
2,009,844	+		PfGW456L13_1823	0.49	+0.9
2,009,845	-		PfGW456L13_1823	0.49	-2.1
2,009,845	-		PfGW456L13_1823	0.49	-0.6
2,009,845	-		PfGW456L13_1823	0.49	-1.0
2,009,845	-		PfGW456L13_1823	0.49	+0.2
2,009,845	-		PfGW456L13_1823	0.49	+0.0
2,009,845	-		PfGW456L13_1823	0.49	-0.6
2,009,845	-		PfGW456L13_1823	0.49	+0.1
2,009,845	-		PfGW456L13_1823	0.49	-0.6
2,009,845	-		PfGW456L13_1823	0.49	-1.6
2,009,845	-		PfGW456L13_1823	0.49	-3.0
2,009,845	-		PfGW456L13_1823	0.49	-0.7
2,009,845	-		PfGW456L13_1823	0.49	-1.0