Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1798

Experiment: Vancomycin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.25 mg/ml
1,979,673	-				+0.7
1,979,815	+		PfGW456L13_1797	0.16	+1.1
1,979,816	-		PfGW456L13_1797	0.16	-0.7
1,979,874	+		PfGW456L13_1797	0.22	-0.4
1,979,895	+		PfGW456L13_1797	0.24	+0.9
1,979,895	+		PfGW456L13_1797	0.24	-0.7
1,979,896	-		PfGW456L13_1797	0.25	-0.2
1,979,896	-		PfGW456L13_1797	0.25	+0.9
1,979,896	-		PfGW456L13_1797	0.25	-0.5
1,979,896	-		PfGW456L13_1797	0.25	-0.2
1,979,896	-		PfGW456L13_1797	0.25	+0.5
1,979,898	+		PfGW456L13_1797	0.25	-3.4
1,979,898	+		PfGW456L13_1797	0.25	-0.6
1,979,899	-		PfGW456L13_1797	0.25	-0.5
1,979,899	-		PfGW456L13_1797	0.25	+0.4
1,979,899	-		PfGW456L13_1797	0.25	+0.2
1,979,980	-		PfGW456L13_1797	0.34	-0.2
1,980,072	+		PfGW456L13_1797	0.44	-0.8
1,980,073	-		PfGW456L13_1797	0.44	-0.1
1,980,162	+		PfGW456L13_1797	0.54	-0.8
1,980,162	+		PfGW456L13_1797	0.54	+0.2
1,980,162	+		PfGW456L13_1797	0.54	+1.4
1,980,163	-		PfGW456L13_1797	0.54	-0.0
1,980,163	-		PfGW456L13_1797	0.54	+1.0
1,980,259	-		PfGW456L13_1797	0.64	-0.2
1,980,316	+		PfGW456L13_1797	0.71	-1.1
1,980,369	+		PfGW456L13_1797	0.77	+0.3
1,980,537	+				-0.5
1,980,537	+				+2.1
1,980,537	+				-0.4
1,980,537	+				+0.7
1,980,538	-				+0.2
1,980,538	-				-0.2
1,980,538	-				-0.8
1,980,743	+		PfGW456L13_1798	0.19	+0.0
1,980,743	+		PfGW456L13_1798	0.19	+2.0
1,980,744	-		PfGW456L13_1798	0.20	+0.5
1,980,744	-		PfGW456L13_1798	0.20	+0.1
1,980,744	-		PfGW456L13_1798	0.20	-0.1
1,980,744	-		PfGW456L13_1798	0.20	-1.4
1,980,758	+		PfGW456L13_1798	0.21	+0.9
1,980,758	+		PfGW456L13_1798	0.21	-0.2
1,980,758	+		PfGW456L13_1798	0.21	-0.8
1,980,759	-		PfGW456L13_1798	0.21	+2.6
1,980,759	-		PfGW456L13_1798	0.21	+0.0
1,981,256	+		PfGW456L13_1798	0.80	-0.7
1,981,256	+		PfGW456L13_1798	0.80	-1.4
1,981,256	+		PfGW456L13_1798	0.80	+0.1
1,981,257	-		PfGW456L13_1798	0.80	+0.9
1,981,257	-		PfGW456L13_1798	0.80	+0.4
1,981,257	-		PfGW456L13_1798	0.80	+0.2
1,981,257	-		PfGW456L13_1798	0.80	+0.9
1,981,265	+		PfGW456L13_1798	0.81	-1.1
1,981,266	-		PfGW456L13_1798	0.81	+0.2
1,981,301	+		PfGW456L13_1798	0.85	-0.8
1,981,301	+		PfGW456L13_1798	0.85	-0.7
1,981,301	+		PfGW456L13_1798	0.85	+0.2
1,981,301	+		PfGW456L13_1798	0.85	+0.8
1,981,301	+		PfGW456L13_1798	0.85	-0.6
1,981,301	+		PfGW456L13_1798	0.85	-1.5
1,981,301	+		PfGW456L13_1798	0.85	-1.0
1,981,301	+		PfGW456L13_1798	0.85	+0.0
1,981,301	+		PfGW456L13_1798	0.85	+0.5
1,981,301	+		PfGW456L13_1798	0.85	-1.8
1,981,302	-		PfGW456L13_1798	0.85	+0.6
1,981,302	-		PfGW456L13_1798	0.85	-0.1
1,981,302	-		PfGW456L13_1798	0.85	+0.3
1,981,302	-		PfGW456L13_1798	0.85	-0.5
1,981,302	-		PfGW456L13_1798	0.85	+0.0
1,981,302	-		PfGW456L13_1798	0.85	-0.2
1,981,336	-		PfGW456L13_1798	0.89	-0.9
1,981,444	+				-1.5
1,981,444	+				+0.5
1,981,444	+				-0.8
1,981,444	+				+1.7
1,981,444	+				-0.4
1,981,444	+				+0.4
1,981,444	+				+0.8
1,981,444	+				+0.1
1,981,444	+				+0.0
1,981,444	+				-0.2
1,981,445	-				-0.8
1,981,445	-				-0.9
1,981,445	-				+0.1
1,981,445	-				+0.6
1,981,445	-				-2.0
1,981,445	-				+1.0
1,981,445	-				-0.4
1,981,445	-				+0.1
1,981,481	+				-1.1
1,981,500	+				-0.5
1,981,509	+				-0.3
1,981,509	+				+0.9
1,981,509	+				-0.2
1,981,509	+				-0.7
1,981,509	+				-1.5
1,981,509	+				+0.2
1,981,509	+				-1.0
1,981,509	+				+0.5
1,981,509	+				-0.7
1,981,510	-				+1.0
1,981,510	-				-0.5
1,981,510	-				-0.4
1,981,669	+		PfGW456L13_1799	0.21	+0.0
1,982,061	+		PfGW456L13_1799	0.58	+0.1
1,982,061	+		PfGW456L13_1799	0.58	-2.1
1,982,062	-		PfGW456L13_1799	0.58	-0.1
1,982,108	+		PfGW456L13_1799	0.63	+0.2
1,982,108	+		PfGW456L13_1799	0.63	+1.0
1,982,108	+		PfGW456L13_1799	0.63	-0.3
1,982,108	+		PfGW456L13_1799	0.63	-1.7
1,982,108	+		PfGW456L13_1799	0.63	+0.2
1,982,108	+		PfGW456L13_1799	0.63	+0.1
1,982,109	-		PfGW456L13_1799	0.63	+0.3
1,982,109	-		PfGW456L13_1799	0.63	-0.8
1,982,109	-		PfGW456L13_1799	0.63	-0.1
1,982,223	+		PfGW456L13_1799	0.74	+1.7
1,982,224	-		PfGW456L13_1799	0.74	+1.5
1,982,402	-				+0.6