Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3166 and Echvi_3167 are separated by 6 nucleotides Echvi_3167 and Echvi_3168 overlap by 4 nucleotides Echvi_3168 and Echvi_3169 are separated by 7 nucleotides Echvi_3169 and Echvi_3170 are separated by 18 nucleotides
Echvi_3166: Echvi_3166 - putative thymidine phosphorylase, at 3,772,151 to 3,773,653
_3166
Echvi_3167: Echvi_3167 - ribose-phosphate pyrophosphokinase, at 3,773,660 to 3,774,553
_3167
Echvi_3168: Echvi_3168 - hypothetical protein, at 3,774,550 to 3,775,194
_3168
Echvi_3169: Echvi_3169 - hypothetical protein, at 3,775,202 to 3,775,495
_3169
Echvi_3170: Echvi_3170 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 3,775,514 to 3,777,616
_3170
Position (kb)
3773
3774
3775 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3772.675 kb on + strand, within Echvi_3166 at 3772.675 kb on + strand, within Echvi_3166 at 3772.675 kb on + strand, within Echvi_3166 at 3772.676 kb on - strand, within Echvi_3166 at 3772.676 kb on - strand, within Echvi_3166 at 3772.696 kb on + strand, within Echvi_3166 at 3772.696 kb on + strand, within Echvi_3166 at 3772.741 kb on + strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.742 kb on - strand, within Echvi_3166 at 3772.745 kb on - strand, within Echvi_3166 at 3772.745 kb on - strand, within Echvi_3166 at 3772.795 kb on + strand, within Echvi_3166 at 3772.796 kb on - strand, within Echvi_3166 at 3772.796 kb on - strand, within Echvi_3166 at 3772.807 kb on - strand, within Echvi_3166 at 3772.849 kb on - strand, within Echvi_3166 at 3772.849 kb on - strand, within Echvi_3166 at 3772.896 kb on + strand, within Echvi_3166 at 3772.974 kb on + strand, within Echvi_3166 at 3772.975 kb on - strand, within Echvi_3166 at 3772.982 kb on - strand, within Echvi_3166 at 3773.002 kb on + strand, within Echvi_3166 at 3773.002 kb on + strand, within Echvi_3166 at 3773.118 kb on + strand, within Echvi_3166 at 3773.176 kb on - strand, within Echvi_3166 at 3773.184 kb on + strand, within Echvi_3166 at 3773.185 kb on - strand, within Echvi_3166 at 3773.188 kb on + strand, within Echvi_3166 at 3773.188 kb on + strand, within Echvi_3166 at 3773.188 kb on + strand, within Echvi_3166 at 3773.189 kb on - strand, within Echvi_3166 at 3773.189 kb on - strand, within Echvi_3166 at 3773.189 kb on - strand, within Echvi_3166 at 3773.189 kb on - strand, within Echvi_3166 at 3773.190 kb on + strand, within Echvi_3166 at 3773.268 kb on + strand, within Echvi_3166 at 3773.287 kb on - strand, within Echvi_3166 at 3773.317 kb on + strand, within Echvi_3166 at 3773.318 kb on - strand, within Echvi_3166 at 3773.406 kb on - strand, within Echvi_3166 at 3773.407 kb on + strand, within Echvi_3166 at 3773.536 kb on - strand at 3773.565 kb on + strand at 3773.565 kb on + strand at 3773.566 kb on - strand at 3773.567 kb on + strand at 3773.568 kb on - strand at 3773.568 kb on - strand at 3773.569 kb on + strand at 3773.569 kb on + strand at 3773.574 kb on + strand at 3773.574 kb on + strand at 3773.574 kb on + strand at 3773.575 kb on - strand at 3773.575 kb on - strand at 3773.575 kb on - strand at 3773.576 kb on + strand at 3773.576 kb on + strand at 3773.576 kb on + strand at 3773.577 kb on - strand at 3773.577 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.645 kb on - strand at 3773.673 kb on + strand at 3773.673 kb on + strand at 3773.709 kb on + strand at 3773.709 kb on + strand at 3773.780 kb on - strand, within Echvi_3167 at 3773.785 kb on + strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.791 kb on - strand, within Echvi_3167 at 3773.791 kb on - strand, within Echvi_3167 at 3773.817 kb on + strand, within Echvi_3167 at 3773.818 kb on - strand, within Echvi_3167 at 3773.905 kb on + strand, within Echvi_3167 at 3773.917 kb on - strand, within Echvi_3167 at 3773.925 kb on - strand, within Echvi_3167 at 3773.934 kb on - strand, within Echvi_3167 at 3773.935 kb on + strand, within Echvi_3167 at 3773.956 kb on + strand, within Echvi_3167 at 3773.957 kb on - strand, within Echvi_3167 at 3774.017 kb on - strand, within Echvi_3167 at 3774.022 kb on + strand, within Echvi_3167 at 3774.022 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.043 kb on - strand, within Echvi_3167 at 3774.046 kb on + strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.052 kb on + strand, within Echvi_3167 at 3774.071 kb on + strand, within Echvi_3167 at 3774.217 kb on + strand, within Echvi_3167 at 3774.218 kb on - strand, within Echvi_3167 at 3774.218 kb on - strand, within Echvi_3167 at 3774.219 kb on + strand, within Echvi_3167 at 3774.219 kb on + strand, within Echvi_3167 at 3774.220 kb on - strand at 3774.220 kb on - strand, within Echvi_3167 at 3774.225 kb on + strand, within Echvi_3167 at 3774.225 kb on + strand, within Echvi_3167 at 3774.226 kb on - strand, within Echvi_3167 at 3774.255 kb on + strand, within Echvi_3167 at 3774.282 kb on + strand, within Echvi_3167 at 3774.282 kb on + strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.295 kb on + strand, within Echvi_3167 at 3774.310 kb on - strand, within Echvi_3167 at 3774.316 kb on + strand, within Echvi_3167 at 3774.316 kb on + strand, within Echvi_3167 at 3774.317 kb on - strand, within Echvi_3167 at 3774.428 kb on - strand, within Echvi_3167 at 3774.469 kb on + strand at 3774.470 kb on - strand at 3774.470 kb on - strand at 3774.470 kb on - strand at 3774.511 kb on + strand at 3774.511 kb on + strand at 3774.512 kb on - strand at 3774.512 kb on - strand at 3774.512 kb on - strand at 3774.570 kb on - strand at 3774.575 kb on + strand at 3774.575 kb on + strand at 3774.580 kb on - strand at 3774.621 kb on + strand, within Echvi_3168 at 3774.733 kb on + strand, within Echvi_3168 at 3774.733 kb on + strand, within Echvi_3168 at 3774.746 kb on + strand, within Echvi_3168 at 3774.790 kb on + strand, within Echvi_3168 at 3774.791 kb on - strand, within Echvi_3168 at 3774.795 kb on + strand, within Echvi_3168 at 3774.795 kb on + strand, within Echvi_3168 at 3774.830 kb on + strand, within Echvi_3168 at 3774.831 kb on - strand, within Echvi_3168 at 3774.831 kb on - strand, within Echvi_3168 at 3774.836 kb on + strand, within Echvi_3168 at 3774.840 kb on - strand, within Echvi_3168 at 3774.882 kb on + strand, within Echvi_3168 at 3774.883 kb on - strand, within Echvi_3168 at 3774.883 kb on - strand, within Echvi_3168 at 3774.936 kb on + strand, within Echvi_3168 at 3774.937 kb on - strand, within Echvi_3168 at 3774.938 kb on + strand, within Echvi_3168 at 3774.939 kb on - strand, within Echvi_3168 at 3774.999 kb on - strand, within Echvi_3168 at 3775.007 kb on - strand, within Echvi_3168 at 3775.053 kb on - strand, within Echvi_3168 at 3775.057 kb on - strand, within Echvi_3168 at 3775.066 kb on + strand, within Echvi_3168 at 3775.066 kb on + strand, within Echvi_3168 at 3775.099 kb on + strand, within Echvi_3168 at 3775.101 kb on + strand, within Echvi_3168 at 3775.167 kb on + strand at 3775.167 kb on + strand at 3775.189 kb on - strand at 3775.211 kb on + strand at 3775.211 kb on + strand at 3775.256 kb on + strand, within Echvi_3169 at 3775.257 kb on - strand, within Echvi_3169 at 3775.258 kb on + strand, within Echvi_3169 at 3775.258 kb on + strand, within Echvi_3169 at 3775.333 kb on + strand, within Echvi_3169 at 3775.334 kb on - strand, within Echvi_3169 at 3775.363 kb on + strand, within Echvi_3169 at 3775.364 kb on - strand, within Echvi_3169 at 3775.400 kb on - strand, within Echvi_3169 at 3775.474 kb on + strand at 3775.500 kb on + strand at 3775.501 kb on - strand at 3775.513 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,772,675 + Echvi_3166 0.35 -0.7 3,772,675 + Echvi_3166 0.35 -1.0 3,772,675 + Echvi_3166 0.35 -0.3 3,772,676 - Echvi_3166 0.35 +2.7 3,772,676 - Echvi_3166 0.35 -0.8 3,772,696 + Echvi_3166 0.36 -0.5 3,772,696 + Echvi_3166 0.36 +0.0 3,772,741 + Echvi_3166 0.39 -0.3 3,772,742 - Echvi_3166 0.39 +0.1 3,772,742 - Echvi_3166 0.39 +0.2 3,772,742 - Echvi_3166 0.39 +0.3 3,772,742 - Echvi_3166 0.39 -2.4 3,772,742 - Echvi_3166 0.39 +0.9 3,772,742 - Echvi_3166 0.39 -1.3 3,772,742 - Echvi_3166 0.39 +1.8 3,772,745 - Echvi_3166 0.40 -2.7 3,772,745 - Echvi_3166 0.40 -0.2 3,772,795 + Echvi_3166 0.43 -1.1 3,772,796 - Echvi_3166 0.43 +0.6 3,772,796 - Echvi_3166 0.43 -0.4 3,772,807 - Echvi_3166 0.44 -0.0 3,772,849 - Echvi_3166 0.46 +1.1 3,772,849 - Echvi_3166 0.46 -0.2 3,772,896 + Echvi_3166 0.50 +0.2 3,772,974 + Echvi_3166 0.55 -0.2 3,772,975 - Echvi_3166 0.55 -0.6 3,772,982 - Echvi_3166 0.55 -0.4 3,773,002 + Echvi_3166 0.57 -0.7 3,773,002 + Echvi_3166 0.57 +0.3 3,773,118 + Echvi_3166 0.64 +0.5 3,773,176 - Echvi_3166 0.68 -0.1 3,773,184 + Echvi_3166 0.69 -1.1 3,773,185 - Echvi_3166 0.69 -1.1 3,773,188 + Echvi_3166 0.69 +0.3 3,773,188 + Echvi_3166 0.69 -1.4 3,773,188 + Echvi_3166 0.69 +1.0 3,773,189 - Echvi_3166 0.69 -0.9 3,773,189 - Echvi_3166 0.69 +0.1 3,773,189 - Echvi_3166 0.69 -1.2 3,773,189 - Echvi_3166 0.69 -0.1 3,773,190 + Echvi_3166 0.69 +0.3 3,773,268 + Echvi_3166 0.74 -0.4 3,773,287 - Echvi_3166 0.76 -0.1 3,773,317 + Echvi_3166 0.78 -0.2 3,773,318 - Echvi_3166 0.78 -0.6 3,773,406 - Echvi_3166 0.83 +2.1 3,773,407 + Echvi_3166 0.84 -1.9 3,773,536 - +1.3 3,773,565 + -2.0 3,773,565 + -1.1 3,773,566 - +0.3 3,773,567 + -0.9 3,773,568 - -3.4 3,773,568 - +0.6 3,773,569 + -1.2 3,773,569 + +0.9 3,773,574 + -0.3 3,773,574 + -2.5 3,773,574 + -0.5 3,773,575 - +0.2 3,773,575 - +1.7 3,773,575 - -0.9 3,773,576 + -0.4 3,773,576 + +0.6 3,773,576 + +0.5 3,773,577 - +1.0 3,773,577 - -0.4 3,773,641 - -2.9 3,773,641 - -0.2 3,773,641 - +0.7 3,773,641 - -1.1 3,773,641 - -0.0 3,773,645 - -0.4 3,773,673 + +1.1 3,773,673 + -1.0 3,773,709 + -0.7 3,773,709 + -1.2 3,773,780 - Echvi_3167 0.13 +1.0 3,773,785 + Echvi_3167 0.14 -1.1 3,773,786 - Echvi_3167 0.14 +0.4 3,773,786 - Echvi_3167 0.14 -0.9 3,773,786 - Echvi_3167 0.14 +0.3 3,773,786 - Echvi_3167 0.14 -0.5 3,773,791 - Echvi_3167 0.15 -0.5 3,773,791 - Echvi_3167 0.15 +0.7 3,773,817 + Echvi_3167 0.18 -0.1 3,773,818 - Echvi_3167 0.18 -0.0 3,773,905 + Echvi_3167 0.27 +1.3 3,773,917 - Echvi_3167 0.29 -0.9 3,773,925 - Echvi_3167 0.30 +0.8 3,773,934 - Echvi_3167 0.31 -0.3 3,773,935 + Echvi_3167 0.31 -1.8 3,773,956 + Echvi_3167 0.33 -0.3 3,773,957 - Echvi_3167 0.33 +1.3 3,774,017 - Echvi_3167 0.40 -0.9 3,774,022 + Echvi_3167 0.40 -0.7 3,774,022 + Echvi_3167 0.40 +1.3 3,774,042 + Echvi_3167 0.43 -1.5 3,774,042 + Echvi_3167 0.43 -0.8 3,774,042 + Echvi_3167 0.43 +2.1 3,774,043 - Echvi_3167 0.43 -1.2 3,774,046 + Echvi_3167 0.43 -0.5 3,774,047 - Echvi_3167 0.43 -0.3 3,774,047 - Echvi_3167 0.43 +1.3 3,774,047 - Echvi_3167 0.43 +0.6 3,774,052 + Echvi_3167 0.44 -1.7 3,774,071 + Echvi_3167 0.46 -0.7 3,774,217 + Echvi_3167 0.62 +1.8 3,774,218 - Echvi_3167 0.62 -1.3 3,774,218 - Echvi_3167 0.62 -1.4 3,774,219 + Echvi_3167 0.63 -1.2 3,774,219 + Echvi_3167 0.63 -0.3 3,774,220 - +0.5 3,774,220 - Echvi_3167 0.63 +0.8 3,774,225 + Echvi_3167 0.63 +1.7 3,774,225 + Echvi_3167 0.63 +2.0 3,774,226 - Echvi_3167 0.63 +0.1 3,774,255 + Echvi_3167 0.67 +0.2 3,774,282 + Echvi_3167 0.70 +0.1 3,774,282 + Echvi_3167 0.70 -1.1 3,774,283 - Echvi_3167 0.70 +0.9 3,774,283 - Echvi_3167 0.70 +0.5 3,774,283 - Echvi_3167 0.70 -1.8 3,774,284 + Echvi_3167 0.70 -0.1 3,774,284 + Echvi_3167 0.70 -1.8 3,774,284 + Echvi_3167 0.70 +0.6 3,774,285 - Echvi_3167 0.70 -2.4 3,774,285 - Echvi_3167 0.70 +1.0 3,774,285 - Echvi_3167 0.70 +0.3 3,774,285 - Echvi_3167 0.70 +2.1 3,774,285 - Echvi_3167 0.70 -0.2 3,774,285 - Echvi_3167 0.70 +0.4 3,774,285 - Echvi_3167 0.70 -1.5 3,774,285 - Echvi_3167 0.70 -0.7 3,774,286 + Echvi_3167 0.70 +1.2 3,774,286 + Echvi_3167 0.70 -1.3 3,774,286 + Echvi_3167 0.70 -2.4 3,774,287 - Echvi_3167 0.70 +2.2 3,774,287 - Echvi_3167 0.70 -1.7 3,774,287 - Echvi_3167 0.70 -0.8 3,774,287 - Echvi_3167 0.70 -0.5 3,774,287 - Echvi_3167 0.70 -0.2 3,774,287 - Echvi_3167 0.70 -0.6 3,774,295 + Echvi_3167 0.71 +0.8 3,774,310 - Echvi_3167 0.73 +0.2 3,774,316 + Echvi_3167 0.73 -1.1 3,774,316 + Echvi_3167 0.73 -1.8 3,774,317 - Echvi_3167 0.73 +1.5 3,774,428 - Echvi_3167 0.86 +1.2 3,774,469 + +1.3 3,774,470 - -1.2 3,774,470 - -0.6 3,774,470 - -1.1 3,774,511 + -0.0 3,774,511 + +0.4 3,774,512 - +0.6 3,774,512 - +1.7 3,774,512 - -0.2 3,774,570 - -0.4 3,774,575 + -3.4 3,774,575 + -0.2 3,774,580 - -0.6 3,774,621 + Echvi_3168 0.11 +0.5 3,774,733 + Echvi_3168 0.28 -0.6 3,774,733 + Echvi_3168 0.28 -0.2 3,774,746 + Echvi_3168 0.30 +1.2 3,774,790 + Echvi_3168 0.37 +1.3 3,774,791 - Echvi_3168 0.37 -0.5 3,774,795 + Echvi_3168 0.38 -1.0 3,774,795 + Echvi_3168 0.38 +1.4 3,774,830 + Echvi_3168 0.43 +1.5 3,774,831 - Echvi_3168 0.44 -0.7 3,774,831 - Echvi_3168 0.44 +3.1 3,774,836 + Echvi_3168 0.44 +0.3 3,774,840 - Echvi_3168 0.45 +0.9 3,774,882 + Echvi_3168 0.51 -0.0 3,774,883 - Echvi_3168 0.52 +0.4 3,774,883 - Echvi_3168 0.52 +1.4 3,774,936 + Echvi_3168 0.60 -0.2 3,774,937 - Echvi_3168 0.60 -0.9 3,774,938 + Echvi_3168 0.60 -2.2 3,774,939 - Echvi_3168 0.60 -0.8 3,774,999 - Echvi_3168 0.70 +2.4 3,775,007 - Echvi_3168 0.71 -0.8 3,775,053 - Echvi_3168 0.78 +1.9 3,775,057 - Echvi_3168 0.79 -0.6 3,775,066 + Echvi_3168 0.80 +0.3 3,775,066 + Echvi_3168 0.80 -0.5 3,775,099 + Echvi_3168 0.85 -1.6 3,775,101 + Echvi_3168 0.85 -1.1 3,775,167 + +0.1 3,775,167 + +0.1 3,775,189 - +0.1 3,775,211 + -0.7 3,775,211 + -1.5 3,775,256 + Echvi_3169 0.18 +0.3 3,775,257 - Echvi_3169 0.19 -0.9 3,775,258 + Echvi_3169 0.19 +0.7 3,775,258 + Echvi_3169 0.19 -1.6 3,775,333 + Echvi_3169 0.45 -0.4 3,775,334 - Echvi_3169 0.45 +2.1 3,775,363 + Echvi_3169 0.55 -0.1 3,775,364 - Echvi_3169 0.55 -0.3 3,775,400 - Echvi_3169 0.67 -0.5 3,775,474 + +0.8 3,775,500 + +0.3 3,775,501 - -1.0 3,775,513 - +0.4
Or see this region's nucleotide sequence