Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3167

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3166 and Echvi_3167 are separated by 6 nucleotidesEchvi_3167 and Echvi_3168 overlap by 4 nucleotidesEchvi_3168 and Echvi_3169 are separated by 7 nucleotidesEchvi_3169 and Echvi_3170 are separated by 18 nucleotides Echvi_3166: Echvi_3166 - putative thymidine phosphorylase, at 3,772,151 to 3,773,653 _3166 Echvi_3167: Echvi_3167 - ribose-phosphate pyrophosphokinase, at 3,773,660 to 3,774,553 _3167 Echvi_3168: Echvi_3168 - hypothetical protein, at 3,774,550 to 3,775,194 _3168 Echvi_3169: Echvi_3169 - hypothetical protein, at 3,775,202 to 3,775,495 _3169 Echvi_3170: Echvi_3170 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 3,775,514 to 3,777,616 _3170 Position (kb) 3773 3774 3775Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3772.675 kb on + strand, within Echvi_3166at 3772.675 kb on + strand, within Echvi_3166at 3772.675 kb on + strand, within Echvi_3166at 3772.676 kb on - strand, within Echvi_3166at 3772.676 kb on - strand, within Echvi_3166at 3772.696 kb on + strand, within Echvi_3166at 3772.696 kb on + strand, within Echvi_3166at 3772.741 kb on + strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.742 kb on - strand, within Echvi_3166at 3772.745 kb on - strand, within Echvi_3166at 3772.745 kb on - strand, within Echvi_3166at 3772.795 kb on + strand, within Echvi_3166at 3772.796 kb on - strand, within Echvi_3166at 3772.796 kb on - strand, within Echvi_3166at 3772.807 kb on - strand, within Echvi_3166at 3772.849 kb on - strand, within Echvi_3166at 3772.849 kb on - strand, within Echvi_3166at 3772.896 kb on + strand, within Echvi_3166at 3772.974 kb on + strand, within Echvi_3166at 3772.975 kb on - strand, within Echvi_3166at 3772.982 kb on - strand, within Echvi_3166at 3773.002 kb on + strand, within Echvi_3166at 3773.002 kb on + strand, within Echvi_3166at 3773.118 kb on + strand, within Echvi_3166at 3773.176 kb on - strand, within Echvi_3166at 3773.184 kb on + strand, within Echvi_3166at 3773.185 kb on - strand, within Echvi_3166at 3773.188 kb on + strand, within Echvi_3166at 3773.188 kb on + strand, within Echvi_3166at 3773.188 kb on + strand, within Echvi_3166at 3773.189 kb on - strand, within Echvi_3166at 3773.189 kb on - strand, within Echvi_3166at 3773.189 kb on - strand, within Echvi_3166at 3773.189 kb on - strand, within Echvi_3166at 3773.190 kb on + strand, within Echvi_3166at 3773.268 kb on + strand, within Echvi_3166at 3773.287 kb on - strand, within Echvi_3166at 3773.317 kb on + strand, within Echvi_3166at 3773.318 kb on - strand, within Echvi_3166at 3773.406 kb on - strand, within Echvi_3166at 3773.407 kb on + strand, within Echvi_3166at 3773.536 kb on - strandat 3773.565 kb on + strandat 3773.565 kb on + strandat 3773.566 kb on - strandat 3773.567 kb on + strandat 3773.568 kb on - strandat 3773.568 kb on - strandat 3773.569 kb on + strandat 3773.569 kb on + strandat 3773.574 kb on + strandat 3773.574 kb on + strandat 3773.574 kb on + strandat 3773.575 kb on - strandat 3773.575 kb on - strandat 3773.575 kb on - strandat 3773.576 kb on + strandat 3773.576 kb on + strandat 3773.576 kb on + strandat 3773.577 kb on - strandat 3773.577 kb on - strandat 3773.641 kb on - strandat 3773.641 kb on - strandat 3773.641 kb on - strandat 3773.641 kb on - strandat 3773.641 kb on - strandat 3773.645 kb on - strandat 3773.673 kb on + strandat 3773.673 kb on + strandat 3773.709 kb on + strandat 3773.709 kb on + strandat 3773.780 kb on - strand, within Echvi_3167at 3773.785 kb on + strand, within Echvi_3167at 3773.786 kb on - strand, within Echvi_3167at 3773.786 kb on - strand, within Echvi_3167at 3773.786 kb on - strand, within Echvi_3167at 3773.786 kb on - strand, within Echvi_3167at 3773.791 kb on - strand, within Echvi_3167at 3773.791 kb on - strand, within Echvi_3167at 3773.817 kb on + strand, within Echvi_3167at 3773.818 kb on - strand, within Echvi_3167at 3773.905 kb on + strand, within Echvi_3167at 3773.917 kb on - strand, within Echvi_3167at 3773.925 kb on - strand, within Echvi_3167at 3773.934 kb on - strand, within Echvi_3167at 3773.935 kb on + strand, within Echvi_3167at 3773.956 kb on + strand, within Echvi_3167at 3773.957 kb on - strand, within Echvi_3167at 3774.017 kb on - strand, within Echvi_3167at 3774.022 kb on + strand, within Echvi_3167at 3774.022 kb on + strand, within Echvi_3167at 3774.042 kb on + strand, within Echvi_3167at 3774.042 kb on + strand, within Echvi_3167at 3774.042 kb on + strand, within Echvi_3167at 3774.043 kb on - strand, within Echvi_3167at 3774.046 kb on + strand, within Echvi_3167at 3774.047 kb on - strand, within Echvi_3167at 3774.047 kb on - strand, within Echvi_3167at 3774.047 kb on - strand, within Echvi_3167at 3774.052 kb on + strand, within Echvi_3167at 3774.071 kb on + strand, within Echvi_3167at 3774.217 kb on + strand, within Echvi_3167at 3774.218 kb on - strand, within Echvi_3167at 3774.218 kb on - strand, within Echvi_3167at 3774.219 kb on + strand, within Echvi_3167at 3774.219 kb on + strand, within Echvi_3167at 3774.220 kb on - strandat 3774.220 kb on - strand, within Echvi_3167at 3774.225 kb on + strand, within Echvi_3167at 3774.225 kb on + strand, within Echvi_3167at 3774.226 kb on - strand, within Echvi_3167at 3774.255 kb on + strand, within Echvi_3167at 3774.282 kb on + strand, within Echvi_3167at 3774.282 kb on + strand, within Echvi_3167at 3774.283 kb on - strand, within Echvi_3167at 3774.283 kb on - strand, within Echvi_3167at 3774.283 kb on - strand, within Echvi_3167at 3774.284 kb on + strand, within Echvi_3167at 3774.284 kb on + strand, within Echvi_3167at 3774.284 kb on + strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.285 kb on - strand, within Echvi_3167at 3774.286 kb on + strand, within Echvi_3167at 3774.286 kb on + strand, within Echvi_3167at 3774.286 kb on + strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.287 kb on - strand, within Echvi_3167at 3774.295 kb on + strand, within Echvi_3167at 3774.310 kb on - strand, within Echvi_3167at 3774.316 kb on + strand, within Echvi_3167at 3774.316 kb on + strand, within Echvi_3167at 3774.317 kb on - strand, within Echvi_3167at 3774.428 kb on - strand, within Echvi_3167at 3774.469 kb on + strandat 3774.470 kb on - strandat 3774.470 kb on - strandat 3774.470 kb on - strandat 3774.511 kb on + strandat 3774.511 kb on + strandat 3774.512 kb on - strandat 3774.512 kb on - strandat 3774.512 kb on - strandat 3774.570 kb on - strandat 3774.575 kb on + strandat 3774.575 kb on + strandat 3774.580 kb on - strandat 3774.621 kb on + strand, within Echvi_3168at 3774.733 kb on + strand, within Echvi_3168at 3774.733 kb on + strand, within Echvi_3168at 3774.746 kb on + strand, within Echvi_3168at 3774.790 kb on + strand, within Echvi_3168at 3774.791 kb on - strand, within Echvi_3168at 3774.795 kb on + strand, within Echvi_3168at 3774.795 kb on + strand, within Echvi_3168at 3774.830 kb on + strand, within Echvi_3168at 3774.831 kb on - strand, within Echvi_3168at 3774.831 kb on - strand, within Echvi_3168at 3774.836 kb on + strand, within Echvi_3168at 3774.840 kb on - strand, within Echvi_3168at 3774.882 kb on + strand, within Echvi_3168at 3774.883 kb on - strand, within Echvi_3168at 3774.883 kb on - strand, within Echvi_3168at 3774.936 kb on + strand, within Echvi_3168at 3774.937 kb on - strand, within Echvi_3168at 3774.938 kb on + strand, within Echvi_3168at 3774.939 kb on - strand, within Echvi_3168at 3774.999 kb on - strand, within Echvi_3168at 3775.007 kb on - strand, within Echvi_3168at 3775.053 kb on - strand, within Echvi_3168at 3775.057 kb on - strand, within Echvi_3168at 3775.066 kb on + strand, within Echvi_3168at 3775.066 kb on + strand, within Echvi_3168at 3775.099 kb on + strand, within Echvi_3168at 3775.101 kb on + strand, within Echvi_3168at 3775.167 kb on + strandat 3775.167 kb on + strandat 3775.189 kb on - strandat 3775.211 kb on + strandat 3775.211 kb on + strandat 3775.256 kb on + strand, within Echvi_3169at 3775.257 kb on - strand, within Echvi_3169at 3775.258 kb on + strand, within Echvi_3169at 3775.258 kb on + strand, within Echvi_3169at 3775.333 kb on + strand, within Echvi_3169at 3775.334 kb on - strand, within Echvi_3169at 3775.363 kb on + strand, within Echvi_3169at 3775.364 kb on - strand, within Echvi_3169at 3775.400 kb on - strand, within Echvi_3169at 3775.474 kb on + strandat 3775.500 kb on + strandat 3775.501 kb on - strandat 3775.513 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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3,772,675 + Echvi_3166 0.35 -0.7
3,772,675 + Echvi_3166 0.35 -1.0
3,772,675 + Echvi_3166 0.35 -0.3
3,772,676 - Echvi_3166 0.35 +2.7
3,772,676 - Echvi_3166 0.35 -0.8
3,772,696 + Echvi_3166 0.36 -0.5
3,772,696 + Echvi_3166 0.36 +0.0
3,772,741 + Echvi_3166 0.39 -0.3
3,772,742 - Echvi_3166 0.39 +0.1
3,772,742 - Echvi_3166 0.39 +0.2
3,772,742 - Echvi_3166 0.39 +0.3
3,772,742 - Echvi_3166 0.39 -2.4
3,772,742 - Echvi_3166 0.39 +0.9
3,772,742 - Echvi_3166 0.39 -1.3
3,772,742 - Echvi_3166 0.39 +1.8
3,772,745 - Echvi_3166 0.40 -2.7
3,772,745 - Echvi_3166 0.40 -0.2
3,772,795 + Echvi_3166 0.43 -1.1
3,772,796 - Echvi_3166 0.43 +0.6
3,772,796 - Echvi_3166 0.43 -0.4
3,772,807 - Echvi_3166 0.44 -0.0
3,772,849 - Echvi_3166 0.46 +1.1
3,772,849 - Echvi_3166 0.46 -0.2
3,772,896 + Echvi_3166 0.50 +0.2
3,772,974 + Echvi_3166 0.55 -0.2
3,772,975 - Echvi_3166 0.55 -0.6
3,772,982 - Echvi_3166 0.55 -0.4
3,773,002 + Echvi_3166 0.57 -0.7
3,773,002 + Echvi_3166 0.57 +0.3
3,773,118 + Echvi_3166 0.64 +0.5
3,773,176 - Echvi_3166 0.68 -0.1
3,773,184 + Echvi_3166 0.69 -1.1
3,773,185 - Echvi_3166 0.69 -1.1
3,773,188 + Echvi_3166 0.69 +0.3
3,773,188 + Echvi_3166 0.69 -1.4
3,773,188 + Echvi_3166 0.69 +1.0
3,773,189 - Echvi_3166 0.69 -0.9
3,773,189 - Echvi_3166 0.69 +0.1
3,773,189 - Echvi_3166 0.69 -1.2
3,773,189 - Echvi_3166 0.69 -0.1
3,773,190 + Echvi_3166 0.69 +0.3
3,773,268 + Echvi_3166 0.74 -0.4
3,773,287 - Echvi_3166 0.76 -0.1
3,773,317 + Echvi_3166 0.78 -0.2
3,773,318 - Echvi_3166 0.78 -0.6
3,773,406 - Echvi_3166 0.83 +2.1
3,773,407 + Echvi_3166 0.84 -1.9
3,773,536 - +1.3
3,773,565 + -2.0
3,773,565 + -1.1
3,773,566 - +0.3
3,773,567 + -0.9
3,773,568 - -3.4
3,773,568 - +0.6
3,773,569 + -1.2
3,773,569 + +0.9
3,773,574 + -0.3
3,773,574 + -2.5
3,773,574 + -0.5
3,773,575 - +0.2
3,773,575 - +1.7
3,773,575 - -0.9
3,773,576 + -0.4
3,773,576 + +0.6
3,773,576 + +0.5
3,773,577 - +1.0
3,773,577 - -0.4
3,773,641 - -2.9
3,773,641 - -0.2
3,773,641 - +0.7
3,773,641 - -1.1
3,773,641 - -0.0
3,773,645 - -0.4
3,773,673 + +1.1
3,773,673 + -1.0
3,773,709 + -0.7
3,773,709 + -1.2
3,773,780 - Echvi_3167 0.13 +1.0
3,773,785 + Echvi_3167 0.14 -1.1
3,773,786 - Echvi_3167 0.14 +0.4
3,773,786 - Echvi_3167 0.14 -0.9
3,773,786 - Echvi_3167 0.14 +0.3
3,773,786 - Echvi_3167 0.14 -0.5
3,773,791 - Echvi_3167 0.15 -0.5
3,773,791 - Echvi_3167 0.15 +0.7
3,773,817 + Echvi_3167 0.18 -0.1
3,773,818 - Echvi_3167 0.18 -0.0
3,773,905 + Echvi_3167 0.27 +1.3
3,773,917 - Echvi_3167 0.29 -0.9
3,773,925 - Echvi_3167 0.30 +0.8
3,773,934 - Echvi_3167 0.31 -0.3
3,773,935 + Echvi_3167 0.31 -1.8
3,773,956 + Echvi_3167 0.33 -0.3
3,773,957 - Echvi_3167 0.33 +1.3
3,774,017 - Echvi_3167 0.40 -0.9
3,774,022 + Echvi_3167 0.40 -0.7
3,774,022 + Echvi_3167 0.40 +1.3
3,774,042 + Echvi_3167 0.43 -1.5
3,774,042 + Echvi_3167 0.43 -0.8
3,774,042 + Echvi_3167 0.43 +2.1
3,774,043 - Echvi_3167 0.43 -1.2
3,774,046 + Echvi_3167 0.43 -0.5
3,774,047 - Echvi_3167 0.43 -0.3
3,774,047 - Echvi_3167 0.43 +1.3
3,774,047 - Echvi_3167 0.43 +0.6
3,774,052 + Echvi_3167 0.44 -1.7
3,774,071 + Echvi_3167 0.46 -0.7
3,774,217 + Echvi_3167 0.62 +1.8
3,774,218 - Echvi_3167 0.62 -1.3
3,774,218 - Echvi_3167 0.62 -1.4
3,774,219 + Echvi_3167 0.63 -1.2
3,774,219 + Echvi_3167 0.63 -0.3
3,774,220 - +0.5
3,774,220 - Echvi_3167 0.63 +0.8
3,774,225 + Echvi_3167 0.63 +1.7
3,774,225 + Echvi_3167 0.63 +2.0
3,774,226 - Echvi_3167 0.63 +0.1
3,774,255 + Echvi_3167 0.67 +0.2
3,774,282 + Echvi_3167 0.70 +0.1
3,774,282 + Echvi_3167 0.70 -1.1
3,774,283 - Echvi_3167 0.70 +0.9
3,774,283 - Echvi_3167 0.70 +0.5
3,774,283 - Echvi_3167 0.70 -1.8
3,774,284 + Echvi_3167 0.70 -0.1
3,774,284 + Echvi_3167 0.70 -1.8
3,774,284 + Echvi_3167 0.70 +0.6
3,774,285 - Echvi_3167 0.70 -2.4
3,774,285 - Echvi_3167 0.70 +1.0
3,774,285 - Echvi_3167 0.70 +0.3
3,774,285 - Echvi_3167 0.70 +2.1
3,774,285 - Echvi_3167 0.70 -0.2
3,774,285 - Echvi_3167 0.70 +0.4
3,774,285 - Echvi_3167 0.70 -1.5
3,774,285 - Echvi_3167 0.70 -0.7
3,774,286 + Echvi_3167 0.70 +1.2
3,774,286 + Echvi_3167 0.70 -1.3
3,774,286 + Echvi_3167 0.70 -2.4
3,774,287 - Echvi_3167 0.70 +2.2
3,774,287 - Echvi_3167 0.70 -1.7
3,774,287 - Echvi_3167 0.70 -0.8
3,774,287 - Echvi_3167 0.70 -0.5
3,774,287 - Echvi_3167 0.70 -0.2
3,774,287 - Echvi_3167 0.70 -0.6
3,774,295 + Echvi_3167 0.71 +0.8
3,774,310 - Echvi_3167 0.73 +0.2
3,774,316 + Echvi_3167 0.73 -1.1
3,774,316 + Echvi_3167 0.73 -1.8
3,774,317 - Echvi_3167 0.73 +1.5
3,774,428 - Echvi_3167 0.86 +1.2
3,774,469 + +1.3
3,774,470 - -1.2
3,774,470 - -0.6
3,774,470 - -1.1
3,774,511 + -0.0
3,774,511 + +0.4
3,774,512 - +0.6
3,774,512 - +1.7
3,774,512 - -0.2
3,774,570 - -0.4
3,774,575 + -3.4
3,774,575 + -0.2
3,774,580 - -0.6
3,774,621 + Echvi_3168 0.11 +0.5
3,774,733 + Echvi_3168 0.28 -0.6
3,774,733 + Echvi_3168 0.28 -0.2
3,774,746 + Echvi_3168 0.30 +1.2
3,774,790 + Echvi_3168 0.37 +1.3
3,774,791 - Echvi_3168 0.37 -0.5
3,774,795 + Echvi_3168 0.38 -1.0
3,774,795 + Echvi_3168 0.38 +1.4
3,774,830 + Echvi_3168 0.43 +1.5
3,774,831 - Echvi_3168 0.44 -0.7
3,774,831 - Echvi_3168 0.44 +3.1
3,774,836 + Echvi_3168 0.44 +0.3
3,774,840 - Echvi_3168 0.45 +0.9
3,774,882 + Echvi_3168 0.51 -0.0
3,774,883 - Echvi_3168 0.52 +0.4
3,774,883 - Echvi_3168 0.52 +1.4
3,774,936 + Echvi_3168 0.60 -0.2
3,774,937 - Echvi_3168 0.60 -0.9
3,774,938 + Echvi_3168 0.60 -2.2
3,774,939 - Echvi_3168 0.60 -0.8
3,774,999 - Echvi_3168 0.70 +2.4
3,775,007 - Echvi_3168 0.71 -0.8
3,775,053 - Echvi_3168 0.78 +1.9
3,775,057 - Echvi_3168 0.79 -0.6
3,775,066 + Echvi_3168 0.80 +0.3
3,775,066 + Echvi_3168 0.80 -0.5
3,775,099 + Echvi_3168 0.85 -1.6
3,775,101 + Echvi_3168 0.85 -1.1
3,775,167 + +0.1
3,775,167 + +0.1
3,775,189 - +0.1
3,775,211 + -0.7
3,775,211 + -1.5
3,775,256 + Echvi_3169 0.18 +0.3
3,775,257 - Echvi_3169 0.19 -0.9
3,775,258 + Echvi_3169 0.19 +0.7
3,775,258 + Echvi_3169 0.19 -1.6
3,775,333 + Echvi_3169 0.45 -0.4
3,775,334 - Echvi_3169 0.45 +2.1
3,775,363 + Echvi_3169 0.55 -0.1
3,775,364 - Echvi_3169 0.55 -0.3
3,775,400 - Echvi_3169 0.67 -0.5
3,775,474 + +0.8
3,775,500 + +0.3
3,775,501 - -1.0
3,775,513 - +0.4

Or see this region's nucleotide sequence