Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2681 and Echvi_2682 are separated by 6 nucleotides Echvi_2682 and Echvi_2683 are separated by 15 nucleotides Echvi_2683 and Echvi_2684 are separated by 54 nucleotides Echvi_2684 and Echvi_2685 overlap by 20 nucleotides
Echvi_2681: Echvi_2681 - hypothetical protein, at 3,186,446 to 3,189,322
_2681
Echvi_2682: Echvi_2682 - Domain of unknown function (DUF303)., at 3,189,329 to 3,191,299
_2682
Echvi_2683: Echvi_2683 - hypothetical protein, at 3,191,315 to 3,191,509
_2683
Echvi_2684: Echvi_2684 - Dihydrofolate reductase, at 3,191,564 to 3,192,100
_2684
Echvi_2685: Echvi_2685 - hypothetical protein, at 3,192,081 to 3,192,305
_2685
Position (kb)
3189
3190
3191
3192 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3188.329 kb on - strand, within Echvi_2681 at 3188.350 kb on + strand, within Echvi_2681 at 3188.350 kb on + strand, within Echvi_2681 at 3188.350 kb on + strand, within Echvi_2681 at 3188.350 kb on + strand, within Echvi_2681 at 3188.351 kb on - strand, within Echvi_2681 at 3188.351 kb on - strand, within Echvi_2681 at 3188.375 kb on + strand, within Echvi_2681 at 3188.377 kb on + strand, within Echvi_2681 at 3188.381 kb on + strand, within Echvi_2681 at 3188.382 kb on - strand, within Echvi_2681 at 3188.382 kb on - strand, within Echvi_2681 at 3188.566 kb on + strand, within Echvi_2681 at 3188.567 kb on - strand, within Echvi_2681 at 3188.611 kb on + strand, within Echvi_2681 at 3188.611 kb on + strand, within Echvi_2681 at 3188.612 kb on - strand, within Echvi_2681 at 3188.612 kb on - strand, within Echvi_2681 at 3188.633 kb on - strand, within Echvi_2681 at 3188.668 kb on - strand, within Echvi_2681 at 3188.668 kb on - strand, within Echvi_2681 at 3188.742 kb on + strand, within Echvi_2681 at 3188.743 kb on - strand, within Echvi_2681 at 3188.743 kb on - strand, within Echvi_2681 at 3188.808 kb on - strand, within Echvi_2681 at 3188.831 kb on + strand, within Echvi_2681 at 3188.831 kb on + strand, within Echvi_2681 at 3188.833 kb on + strand, within Echvi_2681 at 3188.834 kb on - strand, within Echvi_2681 at 3188.834 kb on - strand, within Echvi_2681 at 3188.834 kb on - strand, within Echvi_2681 at 3188.834 kb on - strand, within Echvi_2681 at 3188.894 kb on - strand, within Echvi_2681 at 3188.944 kb on + strand, within Echvi_2681 at 3188.945 kb on - strand, within Echvi_2681 at 3188.945 kb on - strand, within Echvi_2681 at 3188.945 kb on - strand, within Echvi_2681 at 3188.945 kb on - strand, within Echvi_2681 at 3189.001 kb on + strand, within Echvi_2681 at 3189.001 kb on + strand, within Echvi_2681 at 3189.005 kb on + strand, within Echvi_2681 at 3189.006 kb on - strand, within Echvi_2681 at 3189.007 kb on + strand, within Echvi_2681 at 3189.011 kb on + strand, within Echvi_2681 at 3189.012 kb on - strand, within Echvi_2681 at 3189.015 kb on + strand, within Echvi_2681 at 3189.054 kb on + strand at 3189.141 kb on + strand at 3189.158 kb on - strand at 3189.158 kb on - strand at 3189.161 kb on - strand at 3189.161 kb on - strand at 3189.184 kb on + strand at 3189.210 kb on + strand at 3189.211 kb on - strand at 3189.217 kb on - strand at 3189.220 kb on - strand at 3189.268 kb on + strand at 3189.269 kb on - strand at 3189.269 kb on - strand at 3189.278 kb on + strand at 3189.278 kb on + strand at 3189.279 kb on - strand at 3189.279 kb on - strand at 3189.282 kb on + strand at 3189.310 kb on - strand at 3189.347 kb on - strand at 3189.347 kb on - strand at 3189.348 kb on + strand at 3189.349 kb on - strand at 3189.358 kb on + strand at 3189.359 kb on - strand at 3189.366 kb on + strand at 3189.373 kb on - strand at 3189.373 kb on - strand at 3189.373 kb on - strand at 3189.375 kb on + strand at 3189.376 kb on - strand at 3189.376 kb on - strand at 3189.535 kb on + strand, within Echvi_2682 at 3189.535 kb on + strand, within Echvi_2682 at 3189.536 kb on - strand, within Echvi_2682 at 3189.577 kb on + strand, within Echvi_2682 at 3189.596 kb on + strand, within Echvi_2682 at 3189.596 kb on + strand, within Echvi_2682 at 3189.709 kb on - strand, within Echvi_2682 at 3189.782 kb on + strand, within Echvi_2682 at 3189.783 kb on - strand, within Echvi_2682 at 3189.783 kb on - strand, within Echvi_2682 at 3189.804 kb on + strand, within Echvi_2682 at 3189.804 kb on + strand, within Echvi_2682 at 3189.811 kb on - strand, within Echvi_2682 at 3189.848 kb on - strand, within Echvi_2682 at 3189.851 kb on - strand, within Echvi_2682 at 3190.067 kb on - strand, within Echvi_2682 at 3190.067 kb on - strand, within Echvi_2682 at 3190.090 kb on - strand, within Echvi_2682 at 3190.103 kb on - strand, within Echvi_2682 at 3190.109 kb on + strand, within Echvi_2682 at 3190.145 kb on + strand, within Echvi_2682 at 3190.227 kb on - strand, within Echvi_2682 at 3190.288 kb on - strand, within Echvi_2682 at 3190.294 kb on - strand, within Echvi_2682 at 3190.322 kb on + strand, within Echvi_2682 at 3190.322 kb on + strand, within Echvi_2682 at 3190.322 kb on + strand, within Echvi_2682 at 3190.322 kb on + strand, within Echvi_2682 at 3190.323 kb on - strand, within Echvi_2682 at 3190.323 kb on - strand, within Echvi_2682 at 3190.323 kb on - strand, within Echvi_2682 at 3190.328 kb on - strand, within Echvi_2682 at 3190.328 kb on - strand, within Echvi_2682 at 3190.356 kb on - strand, within Echvi_2682 at 3190.362 kb on - strand, within Echvi_2682 at 3190.377 kb on - strand, within Echvi_2682 at 3190.377 kb on - strand, within Echvi_2682 at 3190.378 kb on + strand, within Echvi_2682 at 3190.379 kb on - strand, within Echvi_2682 at 3190.379 kb on - strand, within Echvi_2682 at 3190.570 kb on + strand, within Echvi_2682 at 3190.595 kb on + strand, within Echvi_2682 at 3190.596 kb on - strand, within Echvi_2682 at 3190.596 kb on - strand, within Echvi_2682 at 3190.596 kb on - strand, within Echvi_2682 at 3190.596 kb on - strand, within Echvi_2682 at 3190.603 kb on + strand, within Echvi_2682 at 3190.604 kb on - strand, within Echvi_2682 at 3190.632 kb on + strand, within Echvi_2682 at 3190.681 kb on + strand, within Echvi_2682 at 3190.681 kb on + strand, within Echvi_2682 at 3190.681 kb on + strand, within Echvi_2682 at 3190.682 kb on - strand, within Echvi_2682 at 3190.682 kb on - strand, within Echvi_2682 at 3190.685 kb on + strand, within Echvi_2682 at 3190.685 kb on + strand, within Echvi_2682 at 3190.685 kb on + strand, within Echvi_2682 at 3190.685 kb on + strand, within Echvi_2682 at 3190.686 kb on - strand, within Echvi_2682 at 3190.686 kb on - strand, within Echvi_2682 at 3190.686 kb on - strand, within Echvi_2682 at 3190.878 kb on + strand, within Echvi_2682 at 3190.879 kb on - strand, within Echvi_2682 at 3190.879 kb on - strand, within Echvi_2682 at 3190.879 kb on - strand, within Echvi_2682 at 3190.959 kb on + strand, within Echvi_2682 at 3190.964 kb on + strand, within Echvi_2682 at 3190.965 kb on - strand, within Echvi_2682 at 3190.965 kb on - strand, within Echvi_2682 at 3190.965 kb on - strand, within Echvi_2682 at 3190.965 kb on - strand, within Echvi_2682 at 3191.026 kb on + strand, within Echvi_2682 at 3191.032 kb on - strand, within Echvi_2682 at 3191.052 kb on + strand, within Echvi_2682 at 3191.065 kb on - strand, within Echvi_2682 at 3191.090 kb on - strand, within Echvi_2682 at 3191.153 kb on - strand at 3191.204 kb on + strand at 3191.218 kb on + strand at 3191.336 kb on + strand, within Echvi_2683 at 3191.341 kb on - strand, within Echvi_2683 at 3191.451 kb on + strand, within Echvi_2683 at 3191.476 kb on + strand, within Echvi_2683 at 3191.476 kb on + strand, within Echvi_2683 at 3191.477 kb on - strand, within Echvi_2683 at 3191.516 kb on + strand at 3191.575 kb on - strand at 3191.585 kb on - strand at 3191.608 kb on + strand at 3191.621 kb on - strand, within Echvi_2684 at 3191.621 kb on - strand, within Echvi_2684 at 3191.631 kb on + strand, within Echvi_2684 at 3191.631 kb on + strand, within Echvi_2684 at 3191.631 kb on + strand, within Echvi_2684 at 3191.669 kb on + strand, within Echvi_2684 at 3191.670 kb on - strand, within Echvi_2684 at 3191.727 kb on - strand, within Echvi_2684 at 3191.732 kb on + strand, within Echvi_2684 at 3191.732 kb on + strand, within Echvi_2684 at 3191.733 kb on - strand, within Echvi_2684 at 3191.733 kb on - strand, within Echvi_2684 at 3191.733 kb on - strand, within Echvi_2684 at 3191.733 kb on - strand, within Echvi_2684 at 3191.739 kb on + strand, within Echvi_2684 at 3191.748 kb on + strand, within Echvi_2684 at 3191.748 kb on + strand, within Echvi_2684 at 3191.749 kb on - strand, within Echvi_2684 at 3191.763 kb on - strand, within Echvi_2684 at 3191.786 kb on + strand, within Echvi_2684 at 3191.787 kb on - strand, within Echvi_2684 at 3191.787 kb on - strand, within Echvi_2684 at 3191.787 kb on - strand, within Echvi_2684 at 3191.887 kb on + strand, within Echvi_2684 at 3191.895 kb on - strand, within Echvi_2684 at 3191.961 kb on + strand, within Echvi_2684 at 3191.961 kb on + strand, within Echvi_2684 at 3191.967 kb on + strand, within Echvi_2684 at 3191.968 kb on - strand, within Echvi_2684 at 3191.977 kb on - strand, within Echvi_2684 at 3192.069 kb on + strand at 3192.069 kb on + strand at 3192.189 kb on - strand, within Echvi_2685 at 3192.189 kb on - strand, within Echvi_2685 at 3192.189 kb on - strand, within Echvi_2685 at 3192.190 kb on + strand, within Echvi_2685 at 3192.191 kb on - strand, within Echvi_2685 at 3192.239 kb on + strand, within Echvi_2685 at 3192.239 kb on + strand, within Echvi_2685
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,188,329 - Echvi_2681 0.65 +0.5 3,188,350 + Echvi_2681 0.66 -1.2 3,188,350 + Echvi_2681 0.66 -0.7 3,188,350 + Echvi_2681 0.66 +0.9 3,188,350 + Echvi_2681 0.66 -1.6 3,188,351 - Echvi_2681 0.66 +0.8 3,188,351 - Echvi_2681 0.66 -0.4 3,188,375 + Echvi_2681 0.67 +2.1 3,188,377 + Echvi_2681 0.67 -0.6 3,188,381 + Echvi_2681 0.67 +0.4 3,188,382 - Echvi_2681 0.67 +0.6 3,188,382 - Echvi_2681 0.67 +1.4 3,188,566 + Echvi_2681 0.74 -0.3 3,188,567 - Echvi_2681 0.74 +0.6 3,188,611 + Echvi_2681 0.75 -1.0 3,188,611 + Echvi_2681 0.75 +1.1 3,188,612 - Echvi_2681 0.75 +0.5 3,188,612 - Echvi_2681 0.75 -0.4 3,188,633 - Echvi_2681 0.76 -1.4 3,188,668 - Echvi_2681 0.77 -2.4 3,188,668 - Echvi_2681 0.77 +0.4 3,188,742 + Echvi_2681 0.80 +0.2 3,188,743 - Echvi_2681 0.80 +1.0 3,188,743 - Echvi_2681 0.80 -0.2 3,188,808 - Echvi_2681 0.82 -0.9 3,188,831 + Echvi_2681 0.83 +0.0 3,188,831 + Echvi_2681 0.83 -1.7 3,188,833 + Echvi_2681 0.83 -1.5 3,188,834 - Echvi_2681 0.83 -2.7 3,188,834 - Echvi_2681 0.83 +0.1 3,188,834 - Echvi_2681 0.83 -1.2 3,188,834 - Echvi_2681 0.83 -0.5 3,188,894 - Echvi_2681 0.85 +0.4 3,188,944 + Echvi_2681 0.87 -0.4 3,188,945 - Echvi_2681 0.87 +0.1 3,188,945 - Echvi_2681 0.87 -0.5 3,188,945 - Echvi_2681 0.87 -1.2 3,188,945 - Echvi_2681 0.87 +0.7 3,189,001 + Echvi_2681 0.89 -0.7 3,189,001 + Echvi_2681 0.89 -0.7 3,189,005 + Echvi_2681 0.89 -1.6 3,189,006 - Echvi_2681 0.89 -0.1 3,189,007 + Echvi_2681 0.89 +0.5 3,189,011 + Echvi_2681 0.89 +2.4 3,189,012 - Echvi_2681 0.89 +0.5 3,189,015 + Echvi_2681 0.89 -1.5 3,189,054 + +1.7 3,189,141 + +0.4 3,189,158 - -0.3 3,189,158 - -1.0 3,189,161 - -1.1 3,189,161 - +1.1 3,189,184 + +0.8 3,189,210 + +0.0 3,189,211 - +0.8 3,189,217 - -2.5 3,189,220 - +0.5 3,189,268 + -0.3 3,189,269 - +0.3 3,189,269 - +0.3 3,189,278 + +1.0 3,189,278 + -0.2 3,189,279 - -0.1 3,189,279 - -0.2 3,189,282 + +0.4 3,189,310 - -0.3 3,189,347 - -0.2 3,189,347 - +1.0 3,189,348 + -0.5 3,189,349 - +2.1 3,189,358 + +0.8 3,189,359 - +0.5 3,189,366 + -2.1 3,189,373 - -2.1 3,189,373 - -0.2 3,189,373 - -1.0 3,189,375 + -0.2 3,189,376 - -1.6 3,189,376 - +0.7 3,189,535 + Echvi_2682 0.10 +0.4 3,189,535 + Echvi_2682 0.10 +1.2 3,189,536 - Echvi_2682 0.11 -0.6 3,189,577 + Echvi_2682 0.13 -0.9 3,189,596 + Echvi_2682 0.14 +0.2 3,189,596 + Echvi_2682 0.14 +0.3 3,189,709 - Echvi_2682 0.19 -0.4 3,189,782 + Echvi_2682 0.23 -0.7 3,189,783 - Echvi_2682 0.23 -0.0 3,189,783 - Echvi_2682 0.23 +0.6 3,189,804 + Echvi_2682 0.24 +1.0 3,189,804 + Echvi_2682 0.24 +0.6 3,189,811 - Echvi_2682 0.24 +0.1 3,189,848 - Echvi_2682 0.26 +1.6 3,189,851 - Echvi_2682 0.26 +0.1 3,190,067 - Echvi_2682 0.37 -0.1 3,190,067 - Echvi_2682 0.37 -1.6 3,190,090 - Echvi_2682 0.39 +0.5 3,190,103 - Echvi_2682 0.39 -1.6 3,190,109 + Echvi_2682 0.40 +1.7 3,190,145 + Echvi_2682 0.41 -0.3 3,190,227 - Echvi_2682 0.46 -1.4 3,190,288 - Echvi_2682 0.49 -2.5 3,190,294 - Echvi_2682 0.49 +0.3 3,190,322 + Echvi_2682 0.50 -1.0 3,190,322 + Echvi_2682 0.50 -1.2 3,190,322 + Echvi_2682 0.50 -1.2 3,190,322 + Echvi_2682 0.50 +1.2 3,190,323 - Echvi_2682 0.50 -2.0 3,190,323 - Echvi_2682 0.50 -0.1 3,190,323 - Echvi_2682 0.50 -0.1 3,190,328 - Echvi_2682 0.51 +1.9 3,190,328 - Echvi_2682 0.51 -0.7 3,190,356 - Echvi_2682 0.52 -0.1 3,190,362 - Echvi_2682 0.52 +1.1 3,190,377 - Echvi_2682 0.53 -1.6 3,190,377 - Echvi_2682 0.53 -0.2 3,190,378 + Echvi_2682 0.53 -0.7 3,190,379 - Echvi_2682 0.53 +0.8 3,190,379 - Echvi_2682 0.53 +0.1 3,190,570 + Echvi_2682 0.63 +0.8 3,190,595 + Echvi_2682 0.64 +1.3 3,190,596 - Echvi_2682 0.64 -0.3 3,190,596 - Echvi_2682 0.64 +0.2 3,190,596 - Echvi_2682 0.64 +0.0 3,190,596 - Echvi_2682 0.64 +0.5 3,190,603 + Echvi_2682 0.65 -0.4 3,190,604 - Echvi_2682 0.65 +0.4 3,190,632 + Echvi_2682 0.66 -2.4 3,190,681 + Echvi_2682 0.69 +0.1 3,190,681 + Echvi_2682 0.69 +0.1 3,190,681 + Echvi_2682 0.69 +0.6 3,190,682 - Echvi_2682 0.69 +0.5 3,190,682 - Echvi_2682 0.69 +0.1 3,190,685 + Echvi_2682 0.69 -0.3 3,190,685 + Echvi_2682 0.69 +1.7 3,190,685 + Echvi_2682 0.69 +0.1 3,190,685 + Echvi_2682 0.69 -0.5 3,190,686 - Echvi_2682 0.69 -0.5 3,190,686 - Echvi_2682 0.69 +0.8 3,190,686 - Echvi_2682 0.69 -0.1 3,190,878 + Echvi_2682 0.79 -0.5 3,190,879 - Echvi_2682 0.79 +1.7 3,190,879 - Echvi_2682 0.79 -2.4 3,190,879 - Echvi_2682 0.79 +0.9 3,190,959 + Echvi_2682 0.83 +1.3 3,190,964 + Echvi_2682 0.83 +0.5 3,190,965 - Echvi_2682 0.83 +1.3 3,190,965 - Echvi_2682 0.83 -0.5 3,190,965 - Echvi_2682 0.83 -0.5 3,190,965 - Echvi_2682 0.83 +0.5 3,191,026 + Echvi_2682 0.86 -0.0 3,191,032 - Echvi_2682 0.86 -0.6 3,191,052 + Echvi_2682 0.87 +0.9 3,191,065 - Echvi_2682 0.88 -0.7 3,191,090 - Echvi_2682 0.89 -0.7 3,191,153 - +1.1 3,191,204 + -1.2 3,191,218 + -0.6 3,191,336 + Echvi_2683 0.11 +1.5 3,191,341 - Echvi_2683 0.13 +0.7 3,191,451 + Echvi_2683 0.70 -2.2 3,191,476 + Echvi_2683 0.83 +1.1 3,191,476 + Echvi_2683 0.83 -0.5 3,191,477 - Echvi_2683 0.83 -0.3 3,191,516 + -1.0 3,191,575 - -1.1 3,191,585 - -2.2 3,191,608 + +1.1 3,191,621 - Echvi_2684 0.11 -1.9 3,191,621 - Echvi_2684 0.11 +1.4 3,191,631 + Echvi_2684 0.12 +0.6 3,191,631 + Echvi_2684 0.12 -1.2 3,191,631 + Echvi_2684 0.12 -0.1 3,191,669 + Echvi_2684 0.20 -0.0 3,191,670 - Echvi_2684 0.20 +1.6 3,191,727 - Echvi_2684 0.30 -0.2 3,191,732 + Echvi_2684 0.31 -0.9 3,191,732 + Echvi_2684 0.31 +0.4 3,191,733 - Echvi_2684 0.31 -0.9 3,191,733 - Echvi_2684 0.31 +1.0 3,191,733 - Echvi_2684 0.31 -0.8 3,191,733 - Echvi_2684 0.31 -0.5 3,191,739 + Echvi_2684 0.33 -0.3 3,191,748 + Echvi_2684 0.34 -0.2 3,191,748 + Echvi_2684 0.34 -0.2 3,191,749 - Echvi_2684 0.34 -2.0 3,191,763 - Echvi_2684 0.37 -1.1 3,191,786 + Echvi_2684 0.41 -0.5 3,191,787 - Echvi_2684 0.42 +1.5 3,191,787 - Echvi_2684 0.42 -1.9 3,191,787 - Echvi_2684 0.42 -0.9 3,191,887 + Echvi_2684 0.60 +0.1 3,191,895 - Echvi_2684 0.62 +0.1 3,191,961 + Echvi_2684 0.74 -0.5 3,191,961 + Echvi_2684 0.74 +0.3 3,191,967 + Echvi_2684 0.75 -1.5 3,191,968 - Echvi_2684 0.75 +1.7 3,191,977 - Echvi_2684 0.77 -2.2 3,192,069 + -0.9 3,192,069 + -0.6 3,192,189 - Echvi_2685 0.48 +0.9 3,192,189 - Echvi_2685 0.48 -0.8 3,192,189 - Echvi_2685 0.48 +0.7 3,192,190 + Echvi_2685 0.48 +0.4 3,192,191 - Echvi_2685 0.49 +0.6 3,192,239 + Echvi_2685 0.70 +1.3 3,192,239 + Echvi_2685 0.70 +0.2
Or see this region's nucleotide sequence